Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS34140 and QEN71_RS34145 overlap by 1 nucleotides QEN71_RS34145 and QEN71_RS34150 overlap by 4 nucleotides
QEN71_RS34140: QEN71_RS34140 - electron transfer flavoprotein subunit alpha/FixB family protein, at 975,196 to 976,146
_RS34140
QEN71_RS34145: QEN71_RS34145 - electron transfer flavoprotein subunit beta/FixA family protein, at 976,146 to 976,946
_RS34145
QEN71_RS34150: QEN71_RS34150 - hypothetical protein, at 976,943 to 978,499
_RS34150
Position (kb) 976
977 Strain fitness (log2 ratio) -1
0
1
2
3 at 975.251 kb on + strand at 975.365 kb on + strand, within QEN71_RS34140 at 975.366 kb on - strand, within QEN71_RS34140 at 975.559 kb on - strand, within QEN71_RS34140 at 975.818 kb on + strand, within QEN71_RS34140 at 975.868 kb on - strand, within QEN71_RS34140 at 975.929 kb on + strand, within QEN71_RS34140 at 975.930 kb on - strand, within QEN71_RS34140 at 975.930 kb on - strand, within QEN71_RS34140 at 976.147 kb on + strand at 976.147 kb on + strand at 976.246 kb on + strand, within QEN71_RS34145 at 976.246 kb on + strand, within QEN71_RS34145 at 976.246 kb on + strand, within QEN71_RS34145 at 976.246 kb on + strand, within QEN71_RS34145 at 976.246 kb on + strand, within QEN71_RS34145 at 976.247 kb on - strand, within QEN71_RS34145 at 976.247 kb on - strand, within QEN71_RS34145 at 976.247 kb on - strand, within QEN71_RS34145 at 976.825 kb on + strand, within QEN71_RS34145 at 976.826 kb on - strand, within QEN71_RS34145 at 976.938 kb on + strand at 976.939 kb on - strand at 977.942 kb on + strand, within QEN71_RS34150
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 975,251 + -1.7 975,365 + QEN71_RS34140 0.18 +0.0 975,366 - QEN71_RS34140 0.18 +3.3 975,559 - QEN71_RS34140 0.38 -0.3 975,818 + QEN71_RS34140 0.65 -1.1 975,868 - QEN71_RS34140 0.71 -0.6 975,929 + QEN71_RS34140 0.77 -1.1 975,930 - QEN71_RS34140 0.77 -0.5 975,930 - QEN71_RS34140 0.77 -0.0 976,147 + +0.5 976,147 + +1.1 976,246 + QEN71_RS34145 0.12 -1.1 976,246 + QEN71_RS34145 0.12 -0.9 976,246 + QEN71_RS34145 0.12 -0.8 976,246 + QEN71_RS34145 0.12 -1.3 976,246 + QEN71_RS34145 0.12 +2.1 976,247 - QEN71_RS34145 0.13 +0.6 976,247 - QEN71_RS34145 0.13 -0.6 976,247 - QEN71_RS34145 0.13 +0.4 976,825 + QEN71_RS34145 0.85 +0.5 976,826 - QEN71_RS34145 0.85 +1.5 976,938 + +0.0 976,939 - -0.5 977,942 + QEN71_RS34150 0.64 -0.0
Or see this region's nucleotide sequence