Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS27925 and QEN71_RS27930 overlap by 4 nucleotides QEN71_RS27930 and QEN71_RS27935 are separated by 42 nucleotides QEN71_RS27935 and QEN71_RS27940 are separated by 10 nucleotides
QEN71_RS27925: QEN71_RS27925 - thiamine phosphate synthase, at 6,209,526 to 6,210,641
_RS27925
QEN71_RS27930: QEN71_RS27930 - thiazole synthase, at 6,210,638 to 6,211,462
_RS27930
QEN71_RS27935: QEN71_RS27935 - sulfur carrier protein ThiS, at 6,211,505 to 6,211,702
_RS27935
QEN71_RS27940: QEN71_RS27940 - FAD-dependent oxidoreductase, at 6,211,713 to 6,212,861
_RS27940
Position (kb)
6210
6211
6212 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6211.703 kb on - strand at 6211.703 kb on - strand at 6211.703 kb on - strand at 6211.703 kb on - strand at 6211.703 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.898 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.399 kb on - strand, within QEN71_RS27940
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 6,211,703 - +0.4 6,211,703 - -2.3 6,211,703 - -0.6 6,211,703 - +0.5 6,211,703 - +0.1 6,211,709 - +0.5 6,211,709 - +2.1 6,211,709 - -0.2 6,211,709 - -0.8 6,211,709 - +1.5 6,211,709 - +0.1 6,211,709 - -0.0 6,211,709 - -0.1 6,211,709 - -0.3 6,211,709 - +0.0 6,211,709 - +0.5 6,211,709 - +0.7 6,211,709 - +0.7 6,211,709 - -0.9 6,211,709 - -0.8 6,211,709 - +1.6 6,211,709 - +0.5 6,211,709 - +0.5 6,211,709 - -0.8 6,211,709 - -0.4 6,211,886 - QEN71_RS27940 0.15 +0.1 6,211,886 - QEN71_RS27940 0.15 -0.3 6,211,886 - QEN71_RS27940 0.15 -0.3 6,211,886 - QEN71_RS27940 0.15 -0.7 6,211,886 - QEN71_RS27940 0.15 +0.7 6,211,886 - QEN71_RS27940 0.15 -1.6 6,211,886 - QEN71_RS27940 0.15 -0.6 6,211,886 - QEN71_RS27940 0.15 -0.6 6,211,886 - QEN71_RS27940 0.15 -3.1 6,211,886 - QEN71_RS27940 0.15 -2.3 6,211,886 - QEN71_RS27940 0.15 -2.3 6,211,886 - QEN71_RS27940 0.15 -0.8 6,211,886 - QEN71_RS27940 0.15 -2.2 6,211,886 - QEN71_RS27940 0.15 -0.9 6,211,886 - QEN71_RS27940 0.15 -1.6 6,211,898 - QEN71_RS27940 0.16 -1.3 6,212,111 - QEN71_RS27940 0.35 +0.1 6,212,111 - QEN71_RS27940 0.35 -0.8 6,212,111 - QEN71_RS27940 0.35 -0.4 6,212,111 - QEN71_RS27940 0.35 -1.5 6,212,111 - QEN71_RS27940 0.35 -0.8 6,212,111 - QEN71_RS27940 0.35 -0.3 6,212,111 - QEN71_RS27940 0.35 -0.5 6,212,111 - QEN71_RS27940 0.35 -2.5 6,212,111 - QEN71_RS27940 0.35 -0.6 6,212,111 - QEN71_RS27940 0.35 -0.8 6,212,111 - QEN71_RS27940 0.35 -0.9 6,212,111 - QEN71_RS27940 0.35 +1.1 6,212,138 - QEN71_RS27940 0.37 +0.5 6,212,138 - QEN71_RS27940 0.37 -1.4 6,212,138 - QEN71_RS27940 0.37 +0.5 6,212,138 - QEN71_RS27940 0.37 +0.3 6,212,138 - QEN71_RS27940 0.37 -0.8 6,212,138 - QEN71_RS27940 0.37 -1.1 6,212,138 - QEN71_RS27940 0.37 -2.2 6,212,138 - QEN71_RS27940 0.37 -0.8 6,212,399 - QEN71_RS27940 0.60 +0.1
Or see this region's nucleotide sequence