Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS12805 and QEN71_RS12810 are separated by 12 nucleotides QEN71_RS12810 and QEN71_RS12815 are separated by 259 nucleotides QEN71_RS12815 and QEN71_RS12820 are separated by 732 nucleotides
QEN71_RS12805: QEN71_RS12805 - DUF308 domain-containing protein, at 2,864,270 to 2,864,848
_RS12805
QEN71_RS12810: QEN71_RS12810 - hypothetical protein, at 2,864,861 to 2,865,250
_RS12810
QEN71_RS12815: QEN71_RS12815 - hypothetical protein, at 2,865,510 to 2,866,646
_RS12815
QEN71_RS12820: QEN71_RS12820 - filamentous hemagglutinin N-terminal domain-containing protein, at 2,867,379 to 2,869,805
_RS12820
Position (kb)
2865
2866
2867 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2864.780 kb on + strand, within QEN71_RS12805 at 2865.131 kb on + strand, within QEN71_RS12810 at 2865.132 kb on - strand, within QEN71_RS12810 at 2865.132 kb on - strand, within QEN71_RS12810 at 2865.301 kb on - strand at 2865.308 kb on + strand at 2865.425 kb on - strand at 2865.434 kb on + strand at 2865.434 kb on + strand at 2865.434 kb on + strand at 2865.435 kb on - strand at 2865.577 kb on + strand at 2865.577 kb on + strand at 2865.578 kb on - strand at 2865.578 kb on - strand at 2865.640 kb on + strand, within QEN71_RS12815 at 2865.641 kb on - strand, within QEN71_RS12815 at 2865.828 kb on + strand, within QEN71_RS12815 at 2865.829 kb on - strand, within QEN71_RS12815 at 2865.884 kb on + strand, within QEN71_RS12815 at 2866.054 kb on + strand, within QEN71_RS12815 at 2866.139 kb on - strand, within QEN71_RS12815 at 2866.139 kb on - strand, within QEN71_RS12815 at 2866.262 kb on + strand, within QEN71_RS12815 at 2866.263 kb on - strand, within QEN71_RS12815 at 2866.297 kb on + strand, within QEN71_RS12815 at 2866.298 kb on - strand, within QEN71_RS12815 at 2866.298 kb on - strand, within QEN71_RS12815 at 2866.298 kb on - strand, within QEN71_RS12815 at 2866.352 kb on + strand, within QEN71_RS12815 at 2866.453 kb on + strand, within QEN71_RS12815 at 2866.454 kb on - strand, within QEN71_RS12815 at 2866.457 kb on - strand, within QEN71_RS12815 at 2866.475 kb on - strand, within QEN71_RS12815 at 2866.934 kb on - strand at 2866.947 kb on - strand at 2867.179 kb on + strand at 2867.283 kb on - strand at 2867.335 kb on - strand at 2867.531 kb on - strand at 2867.627 kb on - strand, within QEN71_RS12820
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,864,780 + QEN71_RS12805 0.88 -0.9 2,865,131 + QEN71_RS12810 0.69 +0.2 2,865,132 - QEN71_RS12810 0.69 +1.9 2,865,132 - QEN71_RS12810 0.69 +0.8 2,865,301 - -0.6 2,865,308 + -0.9 2,865,425 - -0.5 2,865,434 + +1.9 2,865,434 + -0.9 2,865,434 + +0.2 2,865,435 - -2.0 2,865,577 + +1.6 2,865,577 + -0.4 2,865,578 - -0.6 2,865,578 - +1.4 2,865,640 + QEN71_RS12815 0.11 +1.3 2,865,641 - QEN71_RS12815 0.12 +0.6 2,865,828 + QEN71_RS12815 0.28 -0.4 2,865,829 - QEN71_RS12815 0.28 -0.0 2,865,884 + QEN71_RS12815 0.33 +0.4 2,866,054 + QEN71_RS12815 0.48 +0.5 2,866,139 - QEN71_RS12815 0.55 +1.2 2,866,139 - QEN71_RS12815 0.55 +0.2 2,866,262 + QEN71_RS12815 0.66 +0.4 2,866,263 - QEN71_RS12815 0.66 +0.5 2,866,297 + QEN71_RS12815 0.69 -1.1 2,866,298 - QEN71_RS12815 0.69 -0.2 2,866,298 - QEN71_RS12815 0.69 -0.2 2,866,298 - QEN71_RS12815 0.69 +0.1 2,866,352 + QEN71_RS12815 0.74 +0.8 2,866,453 + QEN71_RS12815 0.83 -0.8 2,866,454 - QEN71_RS12815 0.83 -1.0 2,866,457 - QEN71_RS12815 0.83 +0.8 2,866,475 - QEN71_RS12815 0.85 -0.7 2,866,934 - +0.1 2,866,947 - +0.2 2,867,179 + -0.0 2,867,283 - +0.7 2,867,335 - +0.2 2,867,531 - +0.3 2,867,627 - QEN71_RS12820 0.10 -0.2
Or see this region's nucleotide sequence