Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04782 and MPMX19_04783 are separated by 188 nucleotides MPMX19_04783 and MPMX19_04784 overlap by 8 nucleotides
MPMX19_04782: MPMX19_04782 - hypothetical protein, at 178,007 to 179,419
_04782
MPMX19_04783: MPMX19_04783 - Ubiquinone biosynthesis O-methyltransferase, mitochondrial, at 179,608 to 180,495
_04783
MPMX19_04784: MPMX19_04784 - N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase, at 180,488 to 182,758
_04784
Position (kb) 179
180
181 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 178.624 kb on - strand, within MPMX19_04782 at 178.719 kb on + strand, within MPMX19_04782 at 178.719 kb on + strand, within MPMX19_04782 at 178.719 kb on + strand, within MPMX19_04782 at 178.719 kb on + strand, within MPMX19_04782 at 178.719 kb on + strand, within MPMX19_04782 at 178.719 kb on + strand, within MPMX19_04782 at 178.719 kb on + strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.720 kb on - strand, within MPMX19_04782 at 178.827 kb on + strand, within MPMX19_04782 at 178.827 kb on + strand, within MPMX19_04782 at 178.827 kb on + strand, within MPMX19_04782 at 178.827 kb on + strand, within MPMX19_04782 at 178.827 kb on + strand, within MPMX19_04782 at 178.827 kb on + strand, within MPMX19_04782 at 178.827 kb on + strand, within MPMX19_04782 at 178.827 kb on + strand, within MPMX19_04782 at 178.827 kb on + strand, within MPMX19_04782 at 178.828 kb on - strand, within MPMX19_04782 at 178.828 kb on - strand, within MPMX19_04782 at 178.828 kb on - strand, within MPMX19_04782 at 178.828 kb on - strand, within MPMX19_04782 at 178.828 kb on - strand, within MPMX19_04782 at 178.836 kb on + strand, within MPMX19_04782 at 178.836 kb on + strand, within MPMX19_04782 at 178.836 kb on + strand, within MPMX19_04782 at 178.836 kb on + strand, within MPMX19_04782 at 178.836 kb on + strand, within MPMX19_04782 at 178.836 kb on + strand, within MPMX19_04782 at 178.836 kb on + strand, within MPMX19_04782 at 178.837 kb on - strand, within MPMX19_04782 at 178.837 kb on - strand, within MPMX19_04782 at 178.837 kb on - strand, within MPMX19_04782 at 178.837 kb on - strand, within MPMX19_04782 at 178.879 kb on - strand, within MPMX19_04782 at 178.938 kb on + strand, within MPMX19_04782 at 178.938 kb on + strand, within MPMX19_04782 at 178.939 kb on - strand, within MPMX19_04782 at 178.939 kb on - strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.947 kb on + strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 178.948 kb on - strand, within MPMX19_04782 at 179.016 kb on + strand, within MPMX19_04782 at 179.017 kb on - strand, within MPMX19_04782 at 179.040 kb on + strand, within MPMX19_04782 at 179.040 kb on + strand, within MPMX19_04782 at 179.041 kb on - strand, within MPMX19_04782 at 179.479 kb on + strand at 179.479 kb on + strand at 179.479 kb on + strand at 179.479 kb on + strand at 179.479 kb on + strand at 179.479 kb on + strand at 179.480 kb on - strand at 179.480 kb on - strand at 179.480 kb on - strand at 179.480 kb on - strand at 179.480 kb on - strand at 179.480 kb on - strand at 179.480 kb on - strand at 179.480 kb on - strand at 179.480 kb on - strand at 179.596 kb on + strand at 179.596 kb on + strand at 179.597 kb on - strand at 179.597 kb on - strand at 179.898 kb on + strand, within MPMX19_04783 at 179.899 kb on + strand, within MPMX19_04783 at 179.899 kb on + strand, within MPMX19_04783 at 179.900 kb on - strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.241 kb on + strand, within MPMX19_04783 at 180.242 kb on - strand, within MPMX19_04783 at 180.242 kb on - strand, within MPMX19_04783 at 180.247 kb on + strand, within MPMX19_04783 at 180.248 kb on - strand, within MPMX19_04783 at 180.322 kb on + strand, within MPMX19_04783 at 180.322 kb on + strand, within MPMX19_04783 at 180.322 kb on + strand, within MPMX19_04783 at 180.323 kb on - strand, within MPMX19_04783 at 180.323 kb on - strand, within MPMX19_04783 at 180.323 kb on - strand, within MPMX19_04783 at 180.340 kb on + strand, within MPMX19_04783 at 180.340 kb on + strand, within MPMX19_04783 at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.657 kb on - strand at 180.657 kb on - strand at 180.657 kb on - strand at 180.657 kb on - strand at 180.657 kb on - strand at 180.657 kb on - strand at 180.845 kb on + strand, within MPMX19_04784 at 180.845 kb on + strand, within MPMX19_04784 at 181.041 kb on + strand, within MPMX19_04784 at 181.041 kb on + strand, within MPMX19_04784 at 181.042 kb on - strand, within MPMX19_04784 at 181.042 kb on - strand, within MPMX19_04784 at 181.214 kb on + strand, within MPMX19_04784 at 181.214 kb on + strand, within MPMX19_04784 at 181.215 kb on - strand, within MPMX19_04784
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 178,624 - MPMX19_04782 0.44 +0.8 178,719 + MPMX19_04782 0.50 +1.1 178,719 + MPMX19_04782 0.50 +0.8 178,719 + MPMX19_04782 0.50 +1.3 178,719 + MPMX19_04782 0.50 -1.2 178,719 + MPMX19_04782 0.50 +0.0 178,719 + MPMX19_04782 0.50 -0.2 178,719 + MPMX19_04782 0.50 +0.2 178,720 - MPMX19_04782 0.50 -0.5 178,720 - MPMX19_04782 0.50 -0.3 178,720 - MPMX19_04782 0.50 +0.8 178,720 - MPMX19_04782 0.50 -1.5 178,720 - MPMX19_04782 0.50 -2.0 178,720 - MPMX19_04782 0.50 -1.7 178,720 - MPMX19_04782 0.50 +1.2 178,720 - MPMX19_04782 0.50 +0.5 178,720 - MPMX19_04782 0.50 +2.0 178,720 - MPMX19_04782 0.50 -0.9 178,720 - MPMX19_04782 0.50 +0.6 178,720 - MPMX19_04782 0.50 +0.7 178,827 + MPMX19_04782 0.58 -0.8 178,827 + MPMX19_04782 0.58 +0.5 178,827 + MPMX19_04782 0.58 +2.6 178,827 + MPMX19_04782 0.58 -0.4 178,827 + MPMX19_04782 0.58 -1.4 178,827 + MPMX19_04782 0.58 +0.0 178,827 + MPMX19_04782 0.58 -2.9 178,827 + MPMX19_04782 0.58 -0.8 178,827 + MPMX19_04782 0.58 +1.6 178,828 - MPMX19_04782 0.58 -0.6 178,828 - MPMX19_04782 0.58 -0.7 178,828 - MPMX19_04782 0.58 -0.4 178,828 - MPMX19_04782 0.58 -1.2 178,828 - MPMX19_04782 0.58 +0.6 178,836 + MPMX19_04782 0.59 -0.3 178,836 + MPMX19_04782 0.59 +0.9 178,836 + MPMX19_04782 0.59 +0.3 178,836 + MPMX19_04782 0.59 +0.1 178,836 + MPMX19_04782 0.59 +1.0 178,836 + MPMX19_04782 0.59 +1.7 178,836 + MPMX19_04782 0.59 -2.0 178,837 - MPMX19_04782 0.59 -0.8 178,837 - MPMX19_04782 0.59 -0.9 178,837 - MPMX19_04782 0.59 +1.1 178,837 - MPMX19_04782 0.59 +0.1 178,879 - MPMX19_04782 0.62 +0.1 178,938 + MPMX19_04782 0.66 +0.2 178,938 + MPMX19_04782 0.66 -0.5 178,939 - MPMX19_04782 0.66 +0.1 178,939 - MPMX19_04782 0.66 -0.3 178,947 + MPMX19_04782 0.67 +2.7 178,947 + MPMX19_04782 0.67 -0.2 178,947 + MPMX19_04782 0.67 -0.1 178,947 + MPMX19_04782 0.67 -0.3 178,947 + MPMX19_04782 0.67 -0.0 178,947 + MPMX19_04782 0.67 +0.6 178,947 + MPMX19_04782 0.67 -0.0 178,947 + MPMX19_04782 0.67 +0.3 178,947 + MPMX19_04782 0.67 +0.2 178,947 + MPMX19_04782 0.67 +0.6 178,947 + MPMX19_04782 0.67 -0.3 178,947 + MPMX19_04782 0.67 -1.0 178,947 + MPMX19_04782 0.67 -0.5 178,948 - MPMX19_04782 0.67 +1.3 178,948 - MPMX19_04782 0.67 -4.7 178,948 - MPMX19_04782 0.67 +0.8 178,948 - MPMX19_04782 0.67 +1.1 178,948 - MPMX19_04782 0.67 +0.7 178,948 - MPMX19_04782 0.67 +0.2 178,948 - MPMX19_04782 0.67 +1.1 178,948 - MPMX19_04782 0.67 -0.6 178,948 - MPMX19_04782 0.67 +0.3 178,948 - MPMX19_04782 0.67 +1.7 178,948 - MPMX19_04782 0.67 -0.1 178,948 - MPMX19_04782 0.67 -0.2 178,948 - MPMX19_04782 0.67 -1.9 178,948 - MPMX19_04782 0.67 -2.3 178,948 - MPMX19_04782 0.67 +0.2 178,948 - MPMX19_04782 0.67 -1.2 179,016 + MPMX19_04782 0.71 -0.1 179,017 - MPMX19_04782 0.71 +0.5 179,040 + MPMX19_04782 0.73 -3.4 179,040 + MPMX19_04782 0.73 -0.3 179,041 - MPMX19_04782 0.73 -1.6 179,479 + -0.1 179,479 + -0.8 179,479 + -0.1 179,479 + +2.1 179,479 + -2.4 179,479 + +0.3 179,480 - -0.0 179,480 - -0.0 179,480 - -1.7 179,480 - +0.2 179,480 - +0.8 179,480 - -1.1 179,480 - -0.1 179,480 - -2.4 179,480 - -0.6 179,596 + +0.7 179,596 + +0.6 179,597 - -1.0 179,597 - -0.0 179,898 + MPMX19_04783 0.33 -0.5 179,899 + MPMX19_04783 0.33 +0.7 179,899 + MPMX19_04783 0.33 +1.4 179,900 - MPMX19_04783 0.33 +0.8 180,088 + MPMX19_04783 0.54 +2.1 180,088 + MPMX19_04783 0.54 -0.3 180,088 + MPMX19_04783 0.54 +1.6 180,088 + MPMX19_04783 0.54 +0.5 180,088 + MPMX19_04783 0.54 -1.0 180,088 + MPMX19_04783 0.54 -1.2 180,088 + MPMX19_04783 0.54 -0.1 180,088 + MPMX19_04783 0.54 +0.2 180,089 - MPMX19_04783 0.54 +0.3 180,089 - MPMX19_04783 0.54 -0.3 180,089 - MPMX19_04783 0.54 +0.5 180,089 - MPMX19_04783 0.54 +0.2 180,089 - MPMX19_04783 0.54 +0.6 180,089 - MPMX19_04783 0.54 +0.9 180,089 - MPMX19_04783 0.54 -0.3 180,136 + MPMX19_04783 0.59 +0.1 180,136 + MPMX19_04783 0.59 +0.1 180,136 + MPMX19_04783 0.59 -0.4 180,136 + MPMX19_04783 0.59 -1.5 180,136 + MPMX19_04783 0.59 -0.8 180,136 + MPMX19_04783 0.59 -0.8 180,136 + MPMX19_04783 0.59 +0.4 180,136 + MPMX19_04783 0.59 -2.0 180,137 - MPMX19_04783 0.60 +1.4 180,137 - MPMX19_04783 0.60 +1.0 180,137 - MPMX19_04783 0.60 -1.3 180,137 - MPMX19_04783 0.60 +0.4 180,137 - MPMX19_04783 0.60 -1.4 180,137 - MPMX19_04783 0.60 +0.4 180,137 - MPMX19_04783 0.60 +1.0 180,137 - MPMX19_04783 0.60 +0.4 180,241 + MPMX19_04783 0.71 -1.5 180,242 - MPMX19_04783 0.71 +0.1 180,242 - MPMX19_04783 0.71 -2.2 180,247 + MPMX19_04783 0.72 +1.5 180,248 - MPMX19_04783 0.72 +0.2 180,322 + MPMX19_04783 0.80 +0.2 180,322 + MPMX19_04783 0.80 +0.8 180,322 + MPMX19_04783 0.80 +0.2 180,323 - MPMX19_04783 0.81 -0.2 180,323 - MPMX19_04783 0.81 +1.4 180,323 - MPMX19_04783 0.81 +1.3 180,340 + MPMX19_04783 0.82 -1.9 180,340 + MPMX19_04783 0.82 -0.2 180,656 + -0.5 180,656 + -1.5 180,656 + -1.0 180,656 + -3.2 180,656 + -0.3 180,656 + -1.0 180,656 + -1.5 180,656 + +0.7 180,657 - -1.7 180,657 - +1.6 180,657 - -1.2 180,657 - -0.8 180,657 - -0.8 180,657 - -0.4 180,845 + MPMX19_04784 0.16 +1.5 180,845 + MPMX19_04784 0.16 -0.2 181,041 + MPMX19_04784 0.24 -1.2 181,041 + MPMX19_04784 0.24 -0.3 181,042 - MPMX19_04784 0.24 -1.2 181,042 - MPMX19_04784 0.24 +0.6 181,214 + MPMX19_04784 0.32 -0.6 181,214 + MPMX19_04784 0.32 -1.5 181,215 - MPMX19_04784 0.32 +2.1
Or see this region's nucleotide sequence