Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01239 and MPMX19_01240 are separated by 222 nucleotides MPMX19_01240 and MPMX19_01241 are separated by 188 nucleotides
MPMX19_01239: MPMX19_01239 - CTP synthase, at 1,288,855 to 1,290,486
_01239
MPMX19_01240: MPMX19_01240 - Protein-export membrane protein SecG, at 1,290,709 to 1,291,032
_01240
MPMX19_01241: MPMX19_01241 - Triosephosphate isomerase, at 1,291,221 to 1,291,976
_01241
Position (kb)
1290
1291
1292 Strain fitness (log2 ratio)
-2
-1
0
1 at 1291.068 kb on - strand at 1291.068 kb on - strand at 1291.068 kb on - strand at 1291.088 kb on - strand at 1291.088 kb on - strand at 1291.118 kb on - strand at 1291.118 kb on - strand at 1291.118 kb on - strand at 1291.151 kb on + strand at 1291.152 kb on - strand at 1291.152 kb on - strand at 1291.163 kb on - strand at 1291.163 kb on - strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.004 kb on + strand at 1292.004 kb on + strand at 1292.004 kb on + strand at 1292.005 kb on - strand at 1292.005 kb on - strand at 1292.005 kb on - strand at 1292.005 kb on - strand at 1292.005 kb on - strand at 1292.005 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 1,291,068 - +1.1 1,291,068 - -1.8 1,291,068 - -0.0 1,291,088 - +1.1 1,291,088 - -0.8 1,291,118 - -0.7 1,291,118 - -1.3 1,291,118 - -2.2 1,291,151 + +0.1 1,291,152 - -0.3 1,291,152 - -1.7 1,291,163 - -0.2 1,291,163 - -0.3 1,292,002 + -0.6 1,292,002 + +0.1 1,292,002 + -0.8 1,292,002 + -1.3 1,292,002 + +1.3 1,292,002 + +0.5 1,292,002 + -0.5 1,292,002 + +1.1 1,292,002 + -0.2 1,292,002 + -0.1 1,292,002 + +1.5 1,292,002 + +0.1 1,292,002 + -2.2 1,292,002 + -2.1 1,292,002 + +0.3 1,292,003 - -0.3 1,292,003 - -0.2 1,292,003 - +0.8 1,292,003 - -0.9 1,292,003 - -0.0 1,292,003 - -2.3 1,292,003 - -1.4 1,292,003 - -0.3 1,292,003 - -0.6 1,292,003 - -1.3 1,292,003 - -1.1 1,292,003 - +0.1 1,292,003 - +0.3 1,292,003 - +0.8 1,292,003 - -1.7 1,292,003 - +0.0 1,292,003 - +0.4 1,292,003 - +0.6 1,292,003 - -1.1 1,292,003 - +0.3 1,292,003 - +0.4 1,292,003 - -0.2 1,292,003 - -0.7 1,292,003 - -0.7 1,292,004 + +0.3 1,292,004 + +0.7 1,292,004 + +1.3 1,292,005 - -0.8 1,292,005 - -0.2 1,292,005 - +0.5 1,292,005 - -0.7 1,292,005 - +0.7 1,292,005 - -0.9
Or see this region's nucleotide sequence