Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00842 and MPMX19_00843 are separated by 0 nucleotides MPMX19_00843 and MPMX19_00844 overlap by 8 nucleotides MPMX19_00844 and MPMX19_00845 are separated by 93 nucleotides MPMX19_00845 and MPMX19_00846 are separated by 510 nucleotides
MPMX19_00842: MPMX19_00842 - Signal peptidase I, at 874,001 to 874,768
_00842
MPMX19_00843: MPMX19_00843 - Ribonuclease 3, at 874,769 to 875,554
_00843
MPMX19_00844: MPMX19_00844 - GTPase Era, at 875,547 to 876,731
_00844
MPMX19_00845: MPMX19_00845 - hypothetical protein, at 876,825 to 877,130
_00845
MPMX19_00846: MPMX19_00846 - hypothetical protein, at 877,641 to 877,934
_00846
Position (kb) 875
876
877 Strain fitness (log2 ratio) -2
-1
0
1
2 at 874.706 kb on + strand at 876.696 kb on + strand at 876.697 kb on - strand at 876.697 kb on - strand at 876.938 kb on + strand, within MPMX19_00845 at 876.939 kb on - strand, within MPMX19_00845 at 876.939 kb on - strand, within MPMX19_00845 at 877.203 kb on + strand at 877.204 kb on - strand at 877.204 kb on - strand at 877.204 kb on - strand at 877.204 kb on - strand at 877.306 kb on + strand at 877.306 kb on + strand at 877.306 kb on + strand at 877.307 kb on - strand at 877.307 kb on - strand at 877.440 kb on + strand at 877.440 kb on + strand at 877.440 kb on + strand at 877.441 kb on - strand at 877.441 kb on - strand at 877.527 kb on - strand at 877.527 kb on - strand at 877.566 kb on + strand at 877.566 kb on + strand at 877.567 kb on - strand at 877.567 kb on - strand at 877.567 kb on - strand at 877.576 kb on - strand at 877.599 kb on + strand at 877.600 kb on - strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.623 kb on - strand at 877.623 kb on - strand at 877.623 kb on - strand at 877.623 kb on - strand at 877.660 kb on + strand at 877.660 kb on + strand at 877.661 kb on - strand at 877.661 kb on - strand at 877.661 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 874,706 + -1.4 876,696 + -0.1 876,697 - +0.7 876,697 - -0.7 876,938 + MPMX19_00845 0.37 -2.4 876,939 - MPMX19_00845 0.37 -0.4 876,939 - MPMX19_00845 0.37 +1.6 877,203 + -0.1 877,204 - -1.5 877,204 - -0.3 877,204 - +0.0 877,204 - -0.1 877,306 + +1.3 877,306 + -2.7 877,306 + -0.1 877,307 - +2.3 877,307 - +0.4 877,440 + -1.1 877,440 + +0.3 877,440 + -0.1 877,441 - -0.1 877,441 - +0.0 877,527 - -1.0 877,527 - -1.1 877,566 + -0.3 877,566 + -1.3 877,567 - -1.4 877,567 - -1.7 877,567 - -1.1 877,576 - -0.1 877,599 + -1.7 877,600 - -0.3 877,622 + -0.9 877,622 + +1.0 877,622 + -1.1 877,622 + +0.4 877,622 + +0.2 877,622 + -0.1 877,622 + -0.1 877,623 - +0.3 877,623 - -0.3 877,623 - +0.8 877,623 - +0.6 877,660 + +0.4 877,660 + +0.5 877,661 - +1.0 877,661 - +1.3 877,661 - +0.9
Or see this region's nucleotide sequence