Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00707

Experiment: NL-CCM; spin-x control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00706 and MPMX19_00707 are separated by 82 nucleotidesMPMX19_00707 and MPMX19_00708 are separated by 84 nucleotides MPMX19_00706: MPMX19_00706 - tRNA(Ile)-lysidine synthase, at 726,749 to 728,104 _00706 MPMX19_00707: MPMX19_00707 - ATP-dependent zinc metalloprotease FtsH, at 728,187 to 730,124 _00707 MPMX19_00708: MPMX19_00708 - hypothetical protein, at 730,209 to 731,372 _00708 Position (kb) 728 729 730 731Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 728.071 kb on + strandat 728.071 kb on + strandat 728.098 kb on + strandat 728.098 kb on + strandat 728.098 kb on + strandat 728.098 kb on + strandat 728.098 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.121 kb on + strandat 730.288 kb on + strandat 730.288 kb on + strandat 730.288 kb on + strandat 730.289 kb on - strandat 730.289 kb on - strandat 730.289 kb on - strandat 730.289 kb on - strandat 730.364 kb on - strand, within MPMX19_00708at 730.379 kb on - strand, within MPMX19_00708at 730.402 kb on + strand, within MPMX19_00708at 730.402 kb on + strand, within MPMX19_00708at 730.402 kb on + strand, within MPMX19_00708at 730.456 kb on + strand, within MPMX19_00708at 730.456 kb on + strand, within MPMX19_00708at 730.543 kb on + strand, within MPMX19_00708at 730.543 kb on + strand, within MPMX19_00708at 730.543 kb on + strand, within MPMX19_00708at 730.639 kb on + strand, within MPMX19_00708at 730.639 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.066 kb on - strand, within MPMX19_00708at 731.066 kb on - strand, within MPMX19_00708at 731.066 kb on - strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM; spin-x control
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728,071 + -0.4
728,071 + +0.7
728,098 + +0.6
728,098 + -0.7
728,098 + +1.3
728,098 + -1.4
728,098 + +1.3
728,102 + +1.0
728,102 + +0.1
728,102 + +1.1
728,102 + -0.6
728,102 + -0.8
728,102 + -0.7
728,102 + +0.1
728,102 + +0.3
728,121 + +1.3
730,288 + -0.6
730,288 + -1.3
730,288 + -1.2
730,289 - +0.4
730,289 - -1.1
730,289 - -1.4
730,289 - -0.4
730,364 - MPMX19_00708 0.13 -0.7
730,379 - MPMX19_00708 0.15 -1.0
730,402 + MPMX19_00708 0.17 -0.2
730,402 + MPMX19_00708 0.17 -0.7
730,402 + MPMX19_00708 0.17 -0.0
730,456 + MPMX19_00708 0.21 -0.2
730,456 + MPMX19_00708 0.21 -1.6
730,543 + MPMX19_00708 0.29 -2.0
730,543 + MPMX19_00708 0.29 +0.6
730,543 + MPMX19_00708 0.29 -1.7
730,639 + MPMX19_00708 0.37 -0.4
730,639 + MPMX19_00708 0.37 -0.8
730,645 + MPMX19_00708 0.37 -0.1
730,645 + MPMX19_00708 0.37 -0.4
730,645 + MPMX19_00708 0.37 +0.7
730,645 + MPMX19_00708 0.37 -0.4
730,645 + MPMX19_00708 0.37 +0.1
730,645 + MPMX19_00708 0.37 -0.4
730,645 + MPMX19_00708 0.37 +0.9
730,645 + MPMX19_00708 0.37 -1.9
730,645 + MPMX19_00708 0.37 -2.4
730,646 - MPMX19_00708 0.38 -2.0
730,646 - MPMX19_00708 0.38 -0.8
730,646 - MPMX19_00708 0.38 +1.3
730,646 - MPMX19_00708 0.38 -0.9
730,646 - MPMX19_00708 0.38 -3.3
730,646 - MPMX19_00708 0.38 -0.7
730,646 - MPMX19_00708 0.38 +0.4
730,646 - MPMX19_00708 0.38 +1.3
730,646 - MPMX19_00708 0.38 +0.2
730,646 - MPMX19_00708 0.38 -1.4
731,065 + MPMX19_00708 0.74 -0.5
731,065 + MPMX19_00708 0.74 -0.4
731,065 + MPMX19_00708 0.74 -1.3
731,065 + MPMX19_00708 0.74 -1.2
731,065 + MPMX19_00708 0.74 -0.3
731,065 + MPMX19_00708 0.74 -0.9
731,066 - MPMX19_00708 0.74 -0.7
731,066 - MPMX19_00708 0.74 -1.9
731,066 - MPMX19_00708 0.74 +0.9
731,113 + MPMX19_00708 0.78 +2.3
731,113 + MPMX19_00708 0.78 +0.7
731,113 + MPMX19_00708 0.78 -1.5
731,113 + MPMX19_00708 0.78 -0.9
731,113 + MPMX19_00708 0.78 -0.3
731,113 + MPMX19_00708 0.78 -0.1
731,113 + MPMX19_00708 0.78 +0.3
731,113 + MPMX19_00708 0.78 +0.7
731,113 + MPMX19_00708 0.78 -1.2
731,113 + MPMX19_00708 0.78 -0.9
731,113 + MPMX19_00708 0.78 +0.0
731,113 + MPMX19_00708 0.78 -0.6
731,113 + MPMX19_00708 0.78 -0.7
731,113 + MPMX19_00708 0.78 -0.7
731,113 + MPMX19_00708 0.78 -0.9
731,113 + MPMX19_00708 0.78 +1.5
731,113 + MPMX19_00708 0.78 +1.7
731,114 - MPMX19_00708 0.78 +2.5
731,114 - MPMX19_00708 0.78 +0.2
731,114 - MPMX19_00708 0.78 -0.2
731,114 - MPMX19_00708 0.78 +0.6
731,114 - MPMX19_00708 0.78 -1.0
731,114 - MPMX19_00708 0.78 +0.6
731,114 - MPMX19_00708 0.78 -0.6
731,114 - MPMX19_00708 0.78 -1.5
731,114 - MPMX19_00708 0.78 -1.7
731,114 - MPMX19_00708 0.78 -2.2
731,114 - MPMX19_00708 0.78 -0.3
731,114 - MPMX19_00708 0.78 +0.4
731,114 - MPMX19_00708 0.78 -0.7
731,114 - MPMX19_00708 0.78 -0.2
731,114 - MPMX19_00708 0.78 -1.1
731,114 - MPMX19_00708 0.78 +0.1
731,114 - MPMX19_00708 0.78 -0.0
731,114 - MPMX19_00708 0.78 -1.3
731,114 - MPMX19_00708 0.78 -0.1
731,114 - MPMX19_00708 0.78 -0.3
731,114 - MPMX19_00708 0.78 +0.1
731,114 - MPMX19_00708 0.78 -0.2
731,114 - MPMX19_00708 0.78 -1.1
731,114 - MPMX19_00708 0.78 -0.1
731,114 - MPMX19_00708 0.78 -1.0
731,114 - MPMX19_00708 0.78 +0.3
731,114 - MPMX19_00708 0.78 -0.8
731,114 - MPMX19_00708 0.78 -0.0

Or see this region's nucleotide sequence