Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS18790

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
146,284	+		LRK53_RS18785	0.34	-1.9
146,284	+		LRK53_RS18785	0.34	+0.8
146,284	+		LRK53_RS18785	0.34	+0.0
146,285	-		LRK53_RS18785	0.34	+0.0
146,285	-		LRK53_RS18785	0.34	-2.7
146,285	-		LRK53_RS18785	0.34	-1.9
146,285	-		LRK53_RS18785	0.34	+0.0
146,285	-		LRK53_RS18785	0.34	-2.1
146,305	+		LRK53_RS18785	0.35	+1.6
146,305	+		LRK53_RS18785	0.35	-1.1
146,306	-		LRK53_RS18785	0.35	+0.5
146,306	-		LRK53_RS18785	0.35	+0.1
146,306	-		LRK53_RS18785	0.35	+1.0
146,516	+		LRK53_RS18785	0.50	-1.5
146,517	-		LRK53_RS18785	0.50	-2.3
146,517	-		LRK53_RS18785	0.50	+2.5
146,536	+		LRK53_RS18785	0.52	+1.2
146,536	+		LRK53_RS18785	0.52	+0.0
146,536	+		LRK53_RS18785	0.52	+0.2
146,537	-		LRK53_RS18785	0.52	+0.0
146,537	-		LRK53_RS18785	0.52	+0.5
146,537	-		LRK53_RS18785	0.52	-1.7
146,537	-		LRK53_RS18785	0.52	-0.8
146,537	-		LRK53_RS18785	0.52	-0.2
146,537	-		LRK53_RS18785	0.52	+1.0
146,537	-		LRK53_RS18785	0.52	-0.3
146,537	-		LRK53_RS18785	0.52	-0.5
146,596	+		LRK53_RS18785	0.56	-1.4
146,596	+		LRK53_RS18785	0.56	-0.7
146,653	+		LRK53_RS18785	0.60	-0.5
147,145	+				-0.1
147,146	-				-2.3
147,146	-				+2.5
147,146	-				-1.4
147,165	+				-0.2
147,215	+				-1.8
147,215	+				-1.7
147,216	-				-2.4
147,216	-				-1.5
147,216	-				-1.7
147,216	-				-1.3
147,216	-				-1.1
147,216	-				+0.7
147,216	-				-0.8
147,226	+				-0.3
147,272	+				-0.0
147,272	+				-2.7
147,272	+				-0.8
147,273	-				-1.5
147,273	-				-0.7
147,313	+				+0.6
147,313	+				-1.1
147,313	+				+0.2
147,376	+				-1.5
147,376	+				-2.6
147,376	+				+0.7
147,377	-				-0.8
147,377	-				-0.8
147,420	+				-1.3
147,499	+				+0.0
147,499	+				-1.2
147,499	+				+0.5
147,499	+				+0.6
147,712	+		LRK53_RS18790	0.14	-1.8
147,838	+		LRK53_RS18790	0.18	-1.0
147,838	+		LRK53_RS18790	0.18	+1.4
147,839	-		LRK53_RS18790	0.18	-2.0
147,901	+		LRK53_RS18790	0.20	+0.1
147,941	+		LRK53_RS18790	0.21	+2.2
147,941	+		LRK53_RS18790	0.21	-1.1
147,941	+		LRK53_RS18790	0.21	+0.7
147,942	-		LRK53_RS18790	0.21	-0.4
147,942	-		LRK53_RS18790	0.21	-0.8
147,942	-		LRK53_RS18790	0.21	+1.3
147,942	-		LRK53_RS18790	0.21	-0.5
148,012	+		LRK53_RS18790	0.23	-2.1
148,012	+		LRK53_RS18790	0.23	-0.5
148,013	-		LRK53_RS18790	0.23	-1.1
148,081	+		LRK53_RS18790	0.25	-1.1
148,081	+		LRK53_RS18790	0.25	-0.5
148,081	+		LRK53_RS18790	0.25	-2.2
148,081	+		LRK53_RS18790	0.25	-0.8
148,082	-		LRK53_RS18790	0.25	-1.5
148,082	-		LRK53_RS18790	0.25	-1.4
148,098	-		LRK53_RS18790	0.26	-2.5
148,165	+		LRK53_RS18790	0.28	-1.6
148,165	+		LRK53_RS18790	0.28	+0.5
148,166	-		LRK53_RS18790	0.28	+1.4
148,166	-		LRK53_RS18790	0.28	-2.6
148,235	+		LRK53_RS18790	0.30	-1.3
148,237	+		LRK53_RS18790	0.30	-0.7
148,237	+		LRK53_RS18790	0.30	-1.7
148,237	+		LRK53_RS18790	0.30	-1.7
148,237	+		LRK53_RS18790	0.30	-1.6
148,237	+		LRK53_RS18790	0.30	+0.2
148,237	+		LRK53_RS18790	0.30	-0.9
148,237	+		LRK53_RS18790	0.30	-0.8
148,238	-		LRK53_RS18790	0.30	-0.9
148,238	-		LRK53_RS18790	0.30	-2.0
148,238	-		LRK53_RS18790	0.30	+0.9
148,238	-		LRK53_RS18790	0.30	+2.0
148,531	+		LRK53_RS18790	0.39	-0.7
148,531	+		LRK53_RS18790	0.39	-1.4
148,531	+		LRK53_RS18790	0.39	-1.1
148,531	+		LRK53_RS18790	0.39	+0.0
148,531	+		LRK53_RS18790	0.39	-0.3
148,531	+		LRK53_RS18790	0.39	+0.9
148,532	-		LRK53_RS18790	0.39	-0.5
148,532	-		LRK53_RS18790	0.39	-1.5
148,532	-		LRK53_RS18790	0.39	-1.3
148,532	-		LRK53_RS18790	0.39	-1.1
148,550	+		LRK53_RS18790	0.39	-0.8
148,550	+		LRK53_RS18790	0.39	-2.3
148,550	+		LRK53_RS18790	0.39	-2.6
148,551	-		LRK53_RS18790	0.39	-1.4
148,551	-		LRK53_RS18790	0.39	-1.3
148,775	+		LRK53_RS18790	0.46	-0.3
148,867	+		LRK53_RS18790	0.48	-1.3
148,867	+		LRK53_RS18790	0.48	-1.2
148,867	+		LRK53_RS18790	0.48	-0.8
148,867	+		LRK53_RS18790	0.48	-0.9
148,867	+		LRK53_RS18790	0.48	-1.9
148,867	+		LRK53_RS18790	0.48	-0.4
148,867	+		LRK53_RS18790	0.48	+0.8
148,867	+		LRK53_RS18790	0.48	+0.0
148,868	-		LRK53_RS18790	0.48	+0.0
148,868	-		LRK53_RS18790	0.48	+1.2
148,868	-		LRK53_RS18790	0.48	-0.3
148,868	-		LRK53_RS18790	0.48	-0.1
148,868	-		LRK53_RS18790	0.48	+1.0
149,093	-		LRK53_RS18790	0.55	-1.4
149,093	-		LRK53_RS18790	0.55	-2.0
149,093	-		LRK53_RS18790	0.55	+0.8
149,139	+		LRK53_RS18790	0.56	-2.9
149,140	-		LRK53_RS18790	0.56	-1.3
149,140	-		LRK53_RS18790	0.56	+0.5
149,207	-		LRK53_RS18790	0.58	+0.9
149,207	-		LRK53_RS18790	0.58	-0.5
149,256	+		LRK53_RS18790	0.60	-0.4
149,256	+		LRK53_RS18790	0.60	-1.5
149,257	-		LRK53_RS18790	0.60	-0.3
149,263	+		LRK53_RS18790	0.60	+0.2
149,263	+		LRK53_RS18790	0.60	-0.3
149,264	-		LRK53_RS18790	0.60	+0.8
149,368	+		LRK53_RS18790	0.63	-0.7
149,369	-		LRK53_RS18790	0.63	-1.5
149,398	+		LRK53_RS18790	0.64	-0.1
149,398	+		LRK53_RS18790	0.64	-1.0
149,399	-		LRK53_RS18790	0.64	-1.5
149,450	+		LRK53_RS18790	0.66	+0.7
149,451	-		LRK53_RS18790	0.66	+0.2
149,484	+		LRK53_RS18790	0.67	-0.3
149,484	+		LRK53_RS18790	0.67	-0.5
149,485	-		LRK53_RS18790	0.67	-1.3
149,488	+		LRK53_RS18790	0.67	-2.0
149,488	+		LRK53_RS18790	0.67	-0.8
149,489	-		LRK53_RS18790	0.67	-0.3
149,542	+		LRK53_RS18790	0.68	-0.6
149,543	-		LRK53_RS18790	0.68	+0.7
149,544	+		LRK53_RS18790	0.68	-1.5
149,571	-		LRK53_RS18790	0.69	-1.9
149,609	+		LRK53_RS18790	0.70	+0.6
149,609	+		LRK53_RS18790	0.70	-1.8
149,610	-		LRK53_RS18790	0.70	-1.1
149,610	-		LRK53_RS18790	0.70	-0.1
149,610	-		LRK53_RS18790	0.70	-1.3
149,622	+		LRK53_RS18790	0.71	+0.0
149,623	-		LRK53_RS18790	0.71	-1.1
149,801	+		LRK53_RS18790	0.76	-1.0
149,801	+		LRK53_RS18790	0.76	-1.8
149,802	-		LRK53_RS18790	0.76	+0.5
149,802	-		LRK53_RS18790	0.76	+0.5
149,842	+		LRK53_RS18790	0.77	-1.5
149,842	+		LRK53_RS18790	0.77	-0.4
149,842	+		LRK53_RS18790	0.77	-1.3
149,843	-		LRK53_RS18790	0.77	+0.7
149,845	+		LRK53_RS18790	0.77	+0.9
149,845	+		LRK53_RS18790	0.77	+0.7
149,845	+		LRK53_RS18790	0.77	-0.8
149,845	+		LRK53_RS18790	0.77	-0.8
149,845	+		LRK53_RS18790	0.77	+0.2
149,845	+		LRK53_RS18790	0.77	-1.5
149,845	+		LRK53_RS18790	0.77	-0.5
149,845	+		LRK53_RS18790	0.77	-2.1
149,846	-		LRK53_RS18790	0.77	-2.5
149,846	-		LRK53_RS18790	0.77	-2.7
149,846	-		LRK53_RS18790	0.77	-0.9
149,846	-		LRK53_RS18790	0.77	+0.5
149,899	-		LRK53_RS18790	0.79	-2.1
149,969	+		LRK53_RS18790	0.81	-2.6
150,013	+		LRK53_RS18790	0.82	-1.4
150,013	+		LRK53_RS18790	0.82	-1.6
150,013	+		LRK53_RS18790	0.82	+0.5
150,014	-		LRK53_RS18790	0.82	-1.3
150,014	-		LRK53_RS18790	0.82	-1.3
150,025	+		LRK53_RS18790	0.83	-0.6
150,025	+		LRK53_RS18790	0.83	+0.5
150,025	+		LRK53_RS18790	0.83	-1.1
150,025	+		LRK53_RS18790	0.83	-0.5
150,026	-		LRK53_RS18790	0.83	-1.3
150,026	-		LRK53_RS18790	0.83	-1.1
150,026	-		LRK53_RS18790	0.83	-3.4
150,176	+		LRK53_RS18790	0.87	-1.1
150,176	+		LRK53_RS18790	0.87	-0.5
150,176	+		LRK53_RS18790	0.87	-1.5
150,176	+		LRK53_RS18790	0.87	-1.1
150,176	+		LRK53_RS18790	0.87	+0.5
150,176	+		LRK53_RS18790	0.87	-1.3
150,177	-		LRK53_RS18790	0.87	-0.2
150,177	-		LRK53_RS18790	0.87	-1.3
150,177	-		LRK53_RS18790	0.87	-1.4
150,177	-		LRK53_RS18790	0.87	-0.8
150,177	-		LRK53_RS18790	0.87	-2.9
150,177	-		LRK53_RS18790	0.87	-3.2
150,177	-		LRK53_RS18790	0.87	-0.8
150,177	-		LRK53_RS18790	0.87	-1.5
150,259	+		LRK53_RS18790	0.89	-1.0
150,259	+		LRK53_RS18790	0.89	-0.2
150,259	+		LRK53_RS18790	0.89	-0.1
150,259	+		LRK53_RS18790	0.89	+0.0
150,260	-		LRK53_RS18790	0.90	-1.4
150,294	-				-0.8
150,294	-				-1.4
150,294	-				-1.5
150,319	+				-2.0
150,319	+				-1.3
150,319	+				-1.3
150,320	-				-0.5
150,320	-				+0.8
150,320	-				-0.5
150,320	-				+0.8
150,320	-				-0.4
150,320	-				-1.0
150,320	-				-0.9
150,468	-				-2.1
150,503	+				-1.5
150,503	+				+1.1
150,503	+				+2.0
150,504	-				-1.5
150,504	-				+0.1
150,609	-				+0.3
150,609	-				-1.4
150,609	-				-0.5
150,710	-				-0.5
150,722	+				-1.5
150,723	-				-1.1
150,841	+		LRK53_RS18795	0.15	-1.0
150,841	+		LRK53_RS18795	0.15	-1.9
150,841	+		LRK53_RS18795	0.15	-0.6
150,857	+		LRK53_RS18795	0.16	+1.3
150,898	+		LRK53_RS18795	0.20	-0.4
151,039	+		LRK53_RS18795	0.33	-2.0
151,039	+		LRK53_RS18795	0.33	-0.3
151,040	-		LRK53_RS18795	0.33	-1.0
151,040	-		LRK53_RS18795	0.33	-0.7
151,040	-		LRK53_RS18795	0.33	-1.3
151,040	-		LRK53_RS18795	0.33	-0.5
151,040	-		LRK53_RS18795	0.33	-2.5
151,040	-		LRK53_RS18795	0.33	-1.1
151,141	+		LRK53_RS18795	0.42	+0.2
151,141	+		LRK53_RS18795	0.42	+1.2
151,141	+		LRK53_RS18795	0.42	-1.0
151,141	+		LRK53_RS18795	0.42	-0.5
151,141	+		LRK53_RS18795	0.42	+0.1
151,189	+		LRK53_RS18795	0.47	-0.5
151,189	+		LRK53_RS18795	0.47	+2.2
151,189	+		LRK53_RS18795	0.47	-1.1
151,189	+		LRK53_RS18795	0.47	+2.3
151,189	+		LRK53_RS18795	0.47	-0.5
151,190	-		LRK53_RS18795	0.47	+0.6
151,190	-		LRK53_RS18795	0.47	+1.9
151,190	-		LRK53_RS18795	0.47	-0.9
151,190	-		LRK53_RS18795	0.47	-1.3
151,190	-		LRK53_RS18795	0.47	-1.5
151,190	-		LRK53_RS18795	0.47	+0.2
151,190	-		LRK53_RS18795	0.47	-0.8
151,190	-		LRK53_RS18795	0.47	+1.0
151,190	-		LRK53_RS18795	0.47	-0.8
151,288	+		LRK53_RS18795	0.56	-2.2
151,288	+		LRK53_RS18795	0.56	-0.6
151,288	+		LRK53_RS18795	0.56	-2.1
151,288	+		LRK53_RS18795	0.56	+0.0
151,288	+		LRK53_RS18795	0.56	-0.8
151,288	+		LRK53_RS18795	0.56	-0.7
151,288	+		LRK53_RS18795	0.56	+0.0
151,289	-		LRK53_RS18795	0.56	-1.1
151,289	-		LRK53_RS18795	0.56	+1.0
151,289	-		LRK53_RS18795	0.56	-1.6
151,289	-		LRK53_RS18795	0.56	+0.9
151,291	+		LRK53_RS18795	0.56	-0.9
151,292	-		LRK53_RS18795	0.56	+1.5
151,333	+		LRK53_RS18795	0.60	+1.5
151,333	+		LRK53_RS18795	0.60	+1.2
151,334	-		LRK53_RS18795	0.60	-1.1
151,334	-		LRK53_RS18795	0.60	-1.0
151,457	-		LRK53_RS18795	0.72	-1.2
151,469	+		LRK53_RS18795	0.73	+0.3