Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17595

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,858,865	-		LRK53_RS17590	0.56	+1.9
3,858,865	-		LRK53_RS17590	0.56	+0.1
3,858,865	-		LRK53_RS17590	0.56	-0.2
3,858,876	+		LRK53_RS17590	0.57	-1.9
3,858,876	+		LRK53_RS17590	0.57	-0.5
3,858,877	-		LRK53_RS17590	0.57	-2.5
3,858,877	-		LRK53_RS17590	0.57	-0.9
3,858,877	-		LRK53_RS17590	0.57	+0.7
3,858,885	+		LRK53_RS17590	0.58	-1.2
3,858,885	+		LRK53_RS17590	0.58	-0.9
3,858,885	+		LRK53_RS17590	0.58	-1.2
3,858,885	+		LRK53_RS17590	0.58	-1.8
3,858,885	+		LRK53_RS17590	0.58	-0.4
3,858,885	+		LRK53_RS17590	0.58	-0.2
3,858,885	+		LRK53_RS17590	0.58	+0.2
3,858,885	+		LRK53_RS17590	0.58	-1.6
3,858,885	+		LRK53_RS17590	0.58	-0.6
3,858,885	+		LRK53_RS17590	0.58	+1.3
3,858,885	+		LRK53_RS17590	0.58	-0.3
3,858,885	+		LRK53_RS17590	0.58	+0.5
3,858,886	-		LRK53_RS17590	0.58	-1.1
3,858,886	-		LRK53_RS17590	0.58	-0.9
3,858,886	-		LRK53_RS17590	0.58	+0.3
3,858,886	-		LRK53_RS17590	0.58	-1.5
3,858,886	-		LRK53_RS17590	0.58	-0.5
3,858,886	-		LRK53_RS17590	0.58	-0.2
3,858,886	-		LRK53_RS17590	0.58	-1.1
3,858,886	-		LRK53_RS17590	0.58	+0.1
3,858,897	+		LRK53_RS17590	0.58	+0.6
3,858,897	+		LRK53_RS17590	0.58	-0.3
3,858,898	-		LRK53_RS17590	0.58	-2.9
3,859,101	+		LRK53_RS17590	0.71	-1.8
3,859,101	+		LRK53_RS17590	0.71	-0.6
3,859,101	+		LRK53_RS17590	0.71	+1.2
3,859,101	+		LRK53_RS17590	0.71	-3.1
3,859,102	-		LRK53_RS17590	0.71	+0.3
3,859,102	-		LRK53_RS17590	0.71	-0.7
3,859,281	+		LRK53_RS17590	0.83	+0.5
3,859,281	+		LRK53_RS17590	0.83	-0.0
3,859,281	+		LRK53_RS17590	0.83	-2.6
3,859,281	+		LRK53_RS17590	0.83	-1.6
3,859,281	+		LRK53_RS17590	0.83	+0.3
3,859,281	+		LRK53_RS17590	0.83	-1.0
3,859,281	+		LRK53_RS17590	0.83	-0.6
3,859,281	+		LRK53_RS17590	0.83	-0.5
3,859,281	+		LRK53_RS17590	0.83	-0.4
3,859,281	+		LRK53_RS17590	0.83	-0.8
3,859,281	+		LRK53_RS17590	0.83	+0.4
3,859,282	-		LRK53_RS17590	0.83	-0.6
3,859,282	-		LRK53_RS17590	0.83	-2.1
3,859,282	-		LRK53_RS17590	0.83	-1.5
3,859,282	-		LRK53_RS17590	0.83	-1.8
3,859,282	-		LRK53_RS17590	0.83	+2.4
3,859,282	-		LRK53_RS17590	0.83	+0.1
3,859,645	+				+1.1
3,859,646	-				-2.1
3,859,986	+		LRK53_RS17595	0.18	-1.1
3,859,986	+		LRK53_RS17595	0.18	-3.5
3,859,986	+		LRK53_RS17595	0.18	+0.3
3,859,986	+		LRK53_RS17595	0.18	-0.4
3,859,986	+		LRK53_RS17595	0.18	+0.2
3,859,986	+		LRK53_RS17595	0.18	-3.0
3,859,986	+		LRK53_RS17595	0.18	-1.0
3,859,987	-		LRK53_RS17595	0.19	-1.2
3,859,987	-		LRK53_RS17595	0.19	-0.5
3,859,987	-		LRK53_RS17595	0.19	-0.1
3,859,987	-		LRK53_RS17595	0.19	+0.3
3,859,987	-		LRK53_RS17595	0.19	-0.4
3,859,987	-		LRK53_RS17595	0.19	-2.2
3,859,987	-		LRK53_RS17595	0.19	-0.1
3,859,987	-		LRK53_RS17595	0.19	-1.2
3,859,987	-		LRK53_RS17595	0.19	+0.9
3,859,987	-		LRK53_RS17595	0.19	+0.1
3,860,050	-		LRK53_RS17595	0.28	-1.7
3,860,097	+		LRK53_RS17595	0.35	-0.2
3,860,097	+		LRK53_RS17595	0.35	-1.9
3,860,097	+		LRK53_RS17595	0.35	-0.5
3,860,097	+		LRK53_RS17595	0.35	-0.5
3,860,097	+		LRK53_RS17595	0.35	-2.0
3,860,098	-		LRK53_RS17595	0.35	-2.3
3,860,098	-		LRK53_RS17595	0.35	-0.8
3,860,098	-		LRK53_RS17595	0.35	-0.2
3,860,098	-		LRK53_RS17595	0.35	-1.1
3,860,098	-		LRK53_RS17595	0.35	-2.5
3,860,112	+		LRK53_RS17595	0.38	-1.3
3,860,160	+		LRK53_RS17595	0.45	-1.4
3,860,654	+				-1.4
3,860,655	-				+0.3
3,860,655	-				-1.8
3,860,705	+		LRK53_RS17600	0.10	-0.4
3,860,804	+		LRK53_RS17600	0.29	-1.5
3,860,804	+		LRK53_RS17600	0.29	-0.8
3,860,804	+		LRK53_RS17600	0.29	-0.1
3,860,805	-		LRK53_RS17600	0.29	+0.1
3,860,837	+		LRK53_RS17600	0.36	-1.8
3,860,837	+		LRK53_RS17600	0.36	-0.9
3,860,837	+		LRK53_RS17600	0.36	-1.2
3,860,837	+		LRK53_RS17600	0.36	-0.7
3,860,838	-		LRK53_RS17600	0.36	-0.6
3,860,838	-		LRK53_RS17600	0.36	-0.6
3,860,838	-		LRK53_RS17600	0.36	+1.4
3,860,838	-		LRK53_RS17600	0.36	-2.7
3,860,838	-		LRK53_RS17600	0.36	+1.3
3,860,838	-		LRK53_RS17600	0.36	-1.7
3,860,891	+		LRK53_RS17600	0.46	-0.1
3,860,891	+		LRK53_RS17600	0.46	-0.6
3,860,892	-		LRK53_RS17600	0.46	-0.8
3,860,892	-		LRK53_RS17600	0.46	-0.8
3,860,892	-		LRK53_RS17600	0.46	-0.4
3,860,975	+		LRK53_RS17600	0.62	-0.1
3,860,975	+		LRK53_RS17600	0.62	-1.0
3,860,975	+		LRK53_RS17600	0.62	+1.1
3,860,975	+		LRK53_RS17600	0.62	+0.6
3,860,975	+		LRK53_RS17600	0.62	-0.4
3,860,975	+		LRK53_RS17600	0.62	-0.5
3,860,975	+		LRK53_RS17600	0.62	-2.2
3,860,975	+		LRK53_RS17600	0.62	+1.3
3,860,975	+		LRK53_RS17600	0.62	+0.1
3,860,975	+		LRK53_RS17600	0.62	-1.8
3,860,975	+		LRK53_RS17600	0.62	+0.4
3,860,976	-		LRK53_RS17600	0.63	+0.1
3,860,976	-		LRK53_RS17600	0.63	-0.6
3,860,976	-		LRK53_RS17600	0.63	+0.5
3,860,976	-		LRK53_RS17600	0.63	-0.2
3,860,976	-		LRK53_RS17600	0.63	+0.9
3,860,996	+		LRK53_RS17600	0.66	+0.1
3,861,065	+		LRK53_RS17600	0.80	+1.2
3,861,066	-		LRK53_RS17600	0.80	-0.1
3,861,066	-		LRK53_RS17600	0.80	-0.6
3,861,066	-		LRK53_RS17600	0.80	+1.1
3,861,240	+				-1.1
3,861,240	+				-0.5
3,861,240	+				-0.4
3,861,240	+				-2.5
3,861,240	+				+0.3
3,861,240	+				-0.7
3,861,240	+				+0.3
3,861,241	-				-0.7
3,861,241	-				-0.2
3,861,241	-				-0.4
3,861,241	-				-2.0
3,861,241	-				-2.3
3,861,241	-				+0.8
3,861,242	+				-1.9
3,861,242	+				-1.0
3,861,242	+				+0.8
3,861,242	+				-0.9
3,861,242	+				-0.1
3,861,242	+				+1.2
3,861,242	+				-1.6
3,861,242	+				+0.6
3,861,242	+				+0.5
3,861,242	+				+0.8
3,861,242	+				-0.7
3,861,242	+				-0.4
3,861,242	+				-0.2
3,861,242	+				+0.6
3,861,242	+				+0.1
3,861,242	+				-2.9
3,861,242	+				-2.3
3,861,242	+				-0.8
3,861,242	+				-1.8
3,861,242	+				-1.4
3,861,242	+				-2.1
3,861,242	+				-1.3
3,861,243	-				+0.0
3,861,243	-				-0.1
3,861,243	-				-0.9
3,861,243	-				-0.5
3,861,243	-				-0.1
3,861,243	-				-2.6
3,861,243	-				-1.2
3,861,243	-				-0.7
3,861,243	-				-0.4
3,861,243	-				-0.9
3,861,243	-				-0.4
3,861,243	-				-0.1
3,861,243	-				-0.0
3,861,243	-				+0.1
3,861,243	-				-0.4
3,861,243	-				-0.1
3,861,243	-				+2.3
3,861,243	-				+0.4
3,861,243	-				-0.9
3,861,243	-				-1.1
3,861,243	-				-1.0
3,861,243	-				-1.0
3,861,367	+				-0.2
3,861,367	+				+0.3
3,861,367	+				-1.0
3,861,367	+				-1.2
3,861,368	-				+2.2
3,861,368	-				-1.4
3,861,368	-				-0.8
3,861,368	-				+0.5