Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15370

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,356,076	-		LRK53_RS15365	0.38	-0.1
3,356,076	-		LRK53_RS15365	0.38	+0.4
3,356,076	-		LRK53_RS15365	0.38	-1.3
3,356,076	-		LRK53_RS15365	0.38	-0.4
3,356,085	+		LRK53_RS15365	0.39	-1.1
3,356,085	+		LRK53_RS15365	0.39	-2.1
3,356,085	+		LRK53_RS15365	0.39	-1.1
3,356,085	+		LRK53_RS15365	0.39	-0.7
3,356,085	+		LRK53_RS15365	0.39	-0.3
3,356,086	-		LRK53_RS15365	0.39	-0.7
3,356,086	-		LRK53_RS15365	0.39	+0.5
3,356,086	-		LRK53_RS15365	0.39	+1.8
3,356,086	-		LRK53_RS15365	0.39	+1.2
3,356,192	+		LRK53_RS15365	0.48	-1.3
3,356,193	-		LRK53_RS15365	0.48	+2.1
3,356,252	+		LRK53_RS15365	0.54	-0.9
3,356,252	+		LRK53_RS15365	0.54	-1.1
3,356,252	+		LRK53_RS15365	0.54	+0.6
3,356,252	+		LRK53_RS15365	0.54	+0.1
3,356,252	+		LRK53_RS15365	0.54	-3.1
3,356,252	+		LRK53_RS15365	0.54	-1.3
3,356,253	-		LRK53_RS15365	0.54	-0.8
3,356,253	-		LRK53_RS15365	0.54	-1.5
3,356,253	-		LRK53_RS15365	0.54	-0.1
3,356,253	-		LRK53_RS15365	0.54	-1.3
3,356,253	-		LRK53_RS15365	0.54	+0.4
3,356,253	-		LRK53_RS15365	0.54	-0.7
3,356,253	-		LRK53_RS15365	0.54	-0.7
3,356,253	-		LRK53_RS15365	0.54	-2.3
3,356,253	-		LRK53_RS15365	0.54	-0.9
3,356,253	-		LRK53_RS15365	0.54	+0.8
3,356,253	-		LRK53_RS15365	0.54	-0.4
3,356,256	+		LRK53_RS15365	0.54	-2.4
3,356,256	+		LRK53_RS15365	0.54	-0.3
3,356,256	+		LRK53_RS15365	0.54	+0.5
3,356,256	+		LRK53_RS15365	0.54	-0.8
3,356,257	-		LRK53_RS15365	0.54	-1.3
3,356,257	-		LRK53_RS15365	0.54	+0.3
3,356,257	-		LRK53_RS15365	0.54	+0.3
3,356,257	-		LRK53_RS15365	0.54	-0.0
3,356,257	-		LRK53_RS15365	0.54	+0.4
3,356,257	-		LRK53_RS15365	0.54	-1.5
3,356,257	-		LRK53_RS15365	0.54	+0.1
3,356,442	+		LRK53_RS15365	0.71	+0.4
3,356,442	+		LRK53_RS15365	0.71	-0.9
3,356,442	+		LRK53_RS15365	0.71	-0.9
3,356,442	+		LRK53_RS15365	0.71	-0.4
3,356,442	+		LRK53_RS15365	0.71	+2.1
3,356,442	+		LRK53_RS15365	0.71	-1.3
3,356,443	-		LRK53_RS15365	0.71	-0.5
3,356,443	-		LRK53_RS15365	0.71	-2.5
3,356,443	-		LRK53_RS15365	0.71	-2.7
3,356,443	-		LRK53_RS15365	0.71	-1.4
3,356,443	-		LRK53_RS15365	0.71	+0.4
3,356,443	-		LRK53_RS15365	0.71	+0.5
3,356,443	-		LRK53_RS15365	0.71	-1.8
3,356,443	-		LRK53_RS15365	0.71	-0.2
3,356,457	+		LRK53_RS15365	0.72	-1.8
3,356,457	+		LRK53_RS15365	0.72	-0.0
3,356,582	+		LRK53_RS15365	0.83	-1.0
3,356,582	+		LRK53_RS15365	0.83	-2.9
3,356,582	+		LRK53_RS15365	0.83	+0.3
3,356,582	+		LRK53_RS15365	0.83	+0.1
3,356,582	+		LRK53_RS15365	0.83	-1.2
3,356,582	+		LRK53_RS15365	0.83	-1.3
3,356,583	-		LRK53_RS15365	0.83	-0.3
3,356,583	-		LRK53_RS15365	0.83	-1.2
3,356,583	-		LRK53_RS15365	0.83	+0.3
3,356,600	+		LRK53_RS15365	0.85	+0.5
3,356,633	+		LRK53_RS15365	0.88	-2.2
3,356,633	+		LRK53_RS15365	0.88	-0.7
3,356,633	+		LRK53_RS15365	0.88	-2.6
3,356,633	+		LRK53_RS15365	0.88	+0.5
3,356,633	+		LRK53_RS15365	0.88	-1.1
3,356,633	+		LRK53_RS15365	0.88	-1.6
3,356,633	+		LRK53_RS15365	0.88	-1.0
3,356,634	-		LRK53_RS15365	0.88	-0.1
3,356,634	-		LRK53_RS15365	0.88	-1.7
3,356,634	-		LRK53_RS15365	0.88	-0.4
3,356,636	+		LRK53_RS15365	0.88	-0.6
3,356,636	+		LRK53_RS15365	0.88	-2.7
3,356,636	+		LRK53_RS15365	0.88	-2.5
3,356,637	-		LRK53_RS15365	0.88	-1.2
3,356,731	+				-1.8
3,356,731	+				-0.8
3,356,731	+				-2.3
3,356,732	-				+1.1
3,356,732	-				-0.3
3,356,982	+		LRK53_RS15370	0.18	-1.7
3,356,982	+		LRK53_RS15370	0.18	-1.7
3,356,982	+		LRK53_RS15370	0.18	-2.0
3,356,982	+		LRK53_RS15370	0.18	-1.9
3,356,983	-		LRK53_RS15370	0.18	-0.1
3,357,049	+		LRK53_RS15370	0.23	-1.9
3,357,050	-		LRK53_RS15370	0.24	-0.5
3,357,092	-		LRK53_RS15370	0.27	-2.2
3,357,154	+		LRK53_RS15370	0.32	-0.5
3,357,154	+		LRK53_RS15370	0.32	-0.4
3,357,154	+		LRK53_RS15370	0.32	-1.2
3,357,155	-		LRK53_RS15370	0.32	-0.1
3,357,155	-		LRK53_RS15370	0.32	-1.0
3,357,155	-		LRK53_RS15370	0.32	-0.4
3,357,155	-		LRK53_RS15370	0.32	+0.4
3,357,155	-		LRK53_RS15370	0.32	-0.7
3,357,245	+		LRK53_RS15370	0.40	-1.5
3,357,245	+		LRK53_RS15370	0.40	-1.1
3,357,245	+		LRK53_RS15370	0.40	-1.9
3,357,245	+		LRK53_RS15370	0.40	-2.0
3,357,349	+		LRK53_RS15370	0.48	-0.8
3,357,349	+		LRK53_RS15370	0.48	-0.0
3,357,349	+		LRK53_RS15370	0.48	-2.2
3,357,349	+		LRK53_RS15370	0.48	-2.3
3,357,349	+		LRK53_RS15370	0.48	-1.4
3,357,349	+		LRK53_RS15370	0.48	-0.3
3,357,349	+		LRK53_RS15370	0.48	+0.5
3,357,349	+		LRK53_RS15370	0.48	-0.5
3,357,349	+		LRK53_RS15370	0.48	-1.0
3,357,349	+		LRK53_RS15370	0.48	-1.9
3,357,349	+		LRK53_RS15370	0.48	-0.3
3,357,349	+		LRK53_RS15370	0.48	-0.6
3,357,349	+		LRK53_RS15370	0.48	+0.1
3,357,349	+		LRK53_RS15370	0.48	-0.3
3,357,349	+		LRK53_RS15370	0.48	+0.3
3,357,349	+		LRK53_RS15370	0.48	+0.7
3,357,349	+		LRK53_RS15370	0.48	-1.4
3,357,350	-		LRK53_RS15370	0.48	-2.7
3,357,350	-		LRK53_RS15370	0.48	-0.9
3,357,350	-		LRK53_RS15370	0.48	-0.7
3,357,350	-		LRK53_RS15370	0.48	-1.1
3,357,350	-		LRK53_RS15370	0.48	+0.1
3,357,350	-		LRK53_RS15370	0.48	-0.7
3,357,350	-		LRK53_RS15370	0.48	-2.6
3,357,350	-		LRK53_RS15370	0.48	+0.3
3,357,350	-		LRK53_RS15370	0.48	-2.5
3,357,350	-		LRK53_RS15370	0.48	-0.3
3,357,350	-		LRK53_RS15370	0.48	-1.5
3,357,350	-		LRK53_RS15370	0.48	-0.8
3,357,350	-		LRK53_RS15370	0.48	-2.7
3,357,350	-		LRK53_RS15370	0.48	-1.6
3,357,350	-		LRK53_RS15370	0.48	-1.5
3,357,384	+		LRK53_RS15370	0.51	+0.1
3,357,384	+		LRK53_RS15370	0.51	-1.2
3,357,384	+		LRK53_RS15370	0.51	-2.2
3,357,384	+		LRK53_RS15370	0.51	-1.6
3,357,385	-		LRK53_RS15370	0.51	+0.5
3,357,385	-		LRK53_RS15370	0.51	-1.8
3,357,458	-		LRK53_RS15370	0.57	-1.5
3,357,458	-		LRK53_RS15370	0.57	-1.5
3,357,482	-		LRK53_RS15370	0.59	-1.6
3,357,482	-		LRK53_RS15370	0.59	-2.3
3,357,529	+		LRK53_RS15370	0.63	-2.0
3,357,529	+		LRK53_RS15370	0.63	-2.0
3,357,529	+		LRK53_RS15370	0.63	-0.6
3,357,529	+		LRK53_RS15370	0.63	-1.4
3,357,530	-		LRK53_RS15370	0.63	-0.7
3,357,530	-		LRK53_RS15370	0.63	-1.3
3,357,635	+		LRK53_RS15370	0.72	+0.3
3,357,635	+		LRK53_RS15370	0.72	-1.8
3,357,636	-		LRK53_RS15370	0.72	-2.6
3,357,671	-		LRK53_RS15370	0.75	+2.6
3,357,671	-		LRK53_RS15370	0.75	+0.7
3,357,671	-		LRK53_RS15370	0.75	-1.3
3,357,673	+		LRK53_RS15370	0.75	-1.2
3,357,674	-		LRK53_RS15370	0.75	+0.3
3,357,674	-		LRK53_RS15370	0.75	-1.1
3,357,674	-		LRK53_RS15370	0.75	-1.7
3,357,674	-		LRK53_RS15370	0.75	+0.5
3,357,674	-		LRK53_RS15370	0.75	-0.5
3,357,674	-		LRK53_RS15370	0.75	+2.5
3,357,674	-		LRK53_RS15370	0.75	+0.3
3,357,843	-		LRK53_RS15370	0.89	-0.9
3,357,843	-		LRK53_RS15370	0.89	-0.8
3,357,945	+				+0.7
3,357,945	+				+0.5
3,357,959	+				-1.7
3,357,959	+				-1.0
3,357,959	+				-1.5
3,357,959	+				+0.5
3,357,959	+				-1.5
3,357,960	-				-0.4
3,357,960	-				-1.4
3,357,960	-				-1.2
3,357,960	-				-3.0
3,357,960	-				-2.2
3,358,006	+				-1.0
3,358,006	+				-0.3
3,358,007	-				-0.3
3,358,007	-				-1.9
3,358,007	-				-2.3
3,358,016	+				-1.0
3,358,016	+				-0.4
3,358,017	-				-0.1
3,358,053	+				-2.8
3,358,053	+				-1.1
3,358,053	+				-1.1
3,358,053	+				-1.4
3,358,053	+				-0.0
3,358,053	+				-0.6
3,358,054	-				-0.4
3,358,054	-				-1.7
3,358,054	-				-0.1
3,358,054	-				-0.1
3,358,054	-				-0.7
3,358,054	-				-0.6
3,358,054	-				-1.6
3,358,054	-				-0.1
3,358,054	-				+0.4
3,358,054	-				+0.5
3,358,307	+		LRK53_RS15375	0.27	-1.9
3,358,307	+		LRK53_RS15375	0.27	-1.1
3,358,331	+		LRK53_RS15375	0.28	-0.1
3,358,331	+		LRK53_RS15375	0.28	-0.3
3,358,332	-		LRK53_RS15375	0.28	-0.3
3,358,332	-		LRK53_RS15375	0.28	-1.1
3,358,334	+		LRK53_RS15375	0.29	+0.7
3,358,517	+		LRK53_RS15375	0.43	+0.9
3,358,517	+		LRK53_RS15375	0.43	-0.5
3,358,517	+		LRK53_RS15375	0.43	-1.9
3,358,517	+		LRK53_RS15375	0.43	-0.8
3,358,517	+		LRK53_RS15375	0.43	+0.2
3,358,517	+		LRK53_RS15375	0.43	-1.2
3,358,517	+		LRK53_RS15375	0.43	-0.4
3,358,517	+		LRK53_RS15375	0.43	-0.1
3,358,518	-		LRK53_RS15375	0.43	+0.7
3,358,518	-		LRK53_RS15375	0.43	-2.1
3,358,518	-		LRK53_RS15375	0.43	-1.3
3,358,518	-		LRK53_RS15375	0.43	-0.1
3,358,518	-		LRK53_RS15375	0.43	-3.4
3,358,523	+		LRK53_RS15375	0.43	-1.6
3,358,523	+		LRK53_RS15375	0.43	-1.1
3,358,524	-		LRK53_RS15375	0.43	-0.8
3,358,550	+		LRK53_RS15375	0.45	-2.0
3,358,551	-		LRK53_RS15375	0.45	-0.5
3,358,568	+		LRK53_RS15375	0.47	-0.4
3,358,568	+		LRK53_RS15375	0.47	-0.5
3,358,568	+		LRK53_RS15375	0.47	-0.1
3,358,568	+		LRK53_RS15375	0.47	-1.0
3,358,569	-		LRK53_RS15375	0.47	-0.5
3,358,569	-		LRK53_RS15375	0.47	+0.6
3,358,569	-		LRK53_RS15375	0.47	+0.5
3,358,569	-		LRK53_RS15375	0.47	-1.9
3,358,569	-		LRK53_RS15375	0.47	-0.4
3,358,829	+		LRK53_RS15375	0.67	-2.8
3,358,829	+		LRK53_RS15375	0.67	-1.1
3,358,829	+		LRK53_RS15375	0.67	+1.2
3,358,829	+		LRK53_RS15375	0.67	-1.2
3,358,829	+		LRK53_RS15375	0.67	+0.9
3,358,829	+		LRK53_RS15375	0.67	+0.1
3,358,829	+		LRK53_RS15375	0.67	-0.7
3,358,830	-		LRK53_RS15375	0.67	-1.3
3,358,830	-		LRK53_RS15375	0.67	+0.5
3,358,830	-		LRK53_RS15375	0.67	-1.2