Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13580

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,992,426	-				-2.0
2,992,426	-				-0.9
2,992,479	-				+0.2
2,992,499	+				-1.6
2,992,499	+				-2.7
2,992,499	+				-0.2
2,992,499	+				-0.9
2,992,499	+				-1.2
2,992,499	+				+0.1
2,992,499	+				+0.2
2,992,500	-				+0.4
2,992,500	-				-3.3
2,992,500	-				+1.2
2,992,500	-				-2.1
2,992,500	-				-0.8
2,992,500	-				+2.7
2,992,500	-				-1.7
2,992,500	-				-1.4
2,992,500	-				-0.7
2,992,500	-				-1.7
2,992,500	-				-0.5
2,992,676	+		LRK53_RS13570	0.47	+1.3
2,992,676	+		LRK53_RS13570	0.47	-0.2
2,992,676	+		LRK53_RS13570	0.47	-2.2
2,992,677	-		LRK53_RS13570	0.47	-1.2
2,992,677	-		LRK53_RS13570	0.47	-0.6
2,992,677	-		LRK53_RS13570	0.47	-1.1
2,992,677	-		LRK53_RS13570	0.47	-1.0
2,992,677	-		LRK53_RS13570	0.47	-0.6
2,992,677	-		LRK53_RS13570	0.47	-0.9
2,992,763	+		LRK53_RS13570	0.70	-0.1
2,992,763	+		LRK53_RS13570	0.70	-1.3
2,992,763	+		LRK53_RS13570	0.70	-0.6
2,992,763	+		LRK53_RS13570	0.70	-2.2
2,992,763	+		LRK53_RS13570	0.70	+1.2
2,992,763	+		LRK53_RS13570	0.70	-1.2
2,992,763	+		LRK53_RS13570	0.70	-1.0
2,992,763	+		LRK53_RS13570	0.70	-2.0
2,992,763	+		LRK53_RS13570	0.70	-1.5
2,992,763	+		LRK53_RS13570	0.70	-0.7
2,992,763	+		LRK53_RS13570	0.70	-1.1
2,992,764	-		LRK53_RS13570	0.70	-1.4
2,992,764	-		LRK53_RS13570	0.70	-1.3
2,992,764	-		LRK53_RS13570	0.70	-0.9
2,992,764	-		LRK53_RS13570	0.70	+1.0
2,992,764	-		LRK53_RS13570	0.70	-0.5
2,992,764	-		LRK53_RS13570	0.70	-2.5
2,992,764	-		LRK53_RS13570	0.70	-0.7
2,992,764	-		LRK53_RS13570	0.70	-1.6
2,992,764	-		LRK53_RS13570	0.70	-0.8
2,992,764	-		LRK53_RS13570	0.70	-0.9
2,992,764	-		LRK53_RS13570	0.70	-1.4
2,992,764	-		LRK53_RS13570	0.70	-1.1
2,992,764	-		LRK53_RS13570	0.70	-1.1
2,992,764	-		LRK53_RS13570	0.70	-1.9
2,992,764	-		LRK53_RS13570	0.70	-2.2
2,992,773	+		LRK53_RS13570	0.73	-0.3
2,992,774	-		LRK53_RS13570	0.73	-1.2
2,992,774	-		LRK53_RS13570	0.73	+0.2
2,992,774	-		LRK53_RS13570	0.73	-0.4
2,993,089	-		LRK53_RS13575	0.82	-2.1
2,993,089	-		LRK53_RS13575	0.82	-1.1
2,993,095	+		LRK53_RS13575	0.84	-1.1
2,993,096	-		LRK53_RS13575	0.85	-1.8
2,993,096	-		LRK53_RS13575	0.85	+0.0
2,993,103	+		LRK53_RS13575	0.88	-0.4
2,993,103	+		LRK53_RS13575	0.88	-0.1
2,993,103	+		LRK53_RS13575	0.88	-0.3
2,993,104	-		LRK53_RS13575	0.88	-0.4
2,993,116	+				-1.1
2,993,116	+				-1.8
2,993,116	+				-1.0
2,993,116	+				+0.2
2,993,116	+				+0.6
2,993,116	+				-1.1
2,993,116	+				-0.1
2,993,116	+				-0.9
2,993,117	-				+0.3
2,993,117	-				-1.1
2,993,117	-				-1.9
2,993,117	-				+1.0
2,993,117	-				-0.4
2,993,117	-				-0.6
2,993,246	+				-0.8
2,993,246	+				-3.6
2,993,246	+				-2.0
2,993,246	+				+0.7
2,993,246	+				-1.7
2,993,247	-				-0.6
2,993,247	-				+1.1
2,993,247	-				+0.6
2,993,247	-				+0.4
2,993,247	-				+0.0
2,993,247	-				-0.6
2,993,281	+				-0.4
2,993,281	+				-0.8
2,993,281	+				-1.1
2,993,281	+				-0.3
2,993,281	+				+0.1
2,993,281	+				-0.1
2,993,282	-				-0.1
2,993,282	-				-1.1
2,993,282	-				+0.4
2,993,484	+		LRK53_RS13580	0.14	+0.6
2,993,484	+		LRK53_RS13580	0.14	+0.0
2,993,484	+		LRK53_RS13580	0.14	-0.8
2,993,484	+		LRK53_RS13580	0.14	-1.6
2,993,484	+		LRK53_RS13580	0.14	-0.1
2,993,484	+		LRK53_RS13580	0.14	-0.8
2,993,484	+		LRK53_RS13580	0.14	-0.1
2,993,484	+		LRK53_RS13580	0.14	-0.6
2,993,484	+		LRK53_RS13580	0.14	-0.4
2,993,484	+		LRK53_RS13580	0.14	-0.5
2,993,484	+		LRK53_RS13580	0.14	-1.4
2,993,485	-		LRK53_RS13580	0.14	+0.2
2,993,485	-		LRK53_RS13580	0.14	+0.4
2,993,485	-		LRK53_RS13580	0.14	-2.1
2,993,485	-		LRK53_RS13580	0.14	+2.2
2,993,485	-		LRK53_RS13580	0.14	-0.1
2,993,485	-		LRK53_RS13580	0.14	-0.5
2,993,485	-		LRK53_RS13580	0.14	-1.2
2,993,485	-		LRK53_RS13580	0.14	-0.3
2,993,485	-		LRK53_RS13580	0.14	-2.3
2,993,485	-		LRK53_RS13580	0.14	-0.3
2,993,598	+		LRK53_RS13580	0.21	-0.4
2,993,599	-		LRK53_RS13580	0.21	-1.3
2,993,599	-		LRK53_RS13580	0.21	+0.4
2,994,201	+		LRK53_RS13580	0.58	-0.4
2,994,201	+		LRK53_RS13580	0.58	+0.0
2,994,201	+		LRK53_RS13580	0.58	-0.6
2,994,201	+		LRK53_RS13580	0.58	-1.4
2,994,201	+		LRK53_RS13580	0.58	+0.4
2,994,201	+		LRK53_RS13580	0.58	-1.1
2,994,202	-		LRK53_RS13580	0.58	-2.2
2,994,202	-		LRK53_RS13580	0.58	-1.1
2,994,202	-		LRK53_RS13580	0.58	+0.0
2,994,202	-		LRK53_RS13580	0.58	-2.2
2,994,202	-		LRK53_RS13580	0.58	-1.2
2,994,261	+		LRK53_RS13580	0.62	-0.6
2,994,261	+		LRK53_RS13580	0.62	-0.6
2,994,261	+		LRK53_RS13580	0.62	+1.4
2,994,261	+		LRK53_RS13580	0.62	-0.8
2,994,261	+		LRK53_RS13580	0.62	+0.2
2,994,261	+		LRK53_RS13580	0.62	-0.2
2,994,261	+		LRK53_RS13580	0.62	-0.1
2,994,261	+		LRK53_RS13580	0.62	-1.1
2,994,261	+		LRK53_RS13580	0.62	-0.4
2,994,261	+		LRK53_RS13580	0.62	-0.7
2,994,261	+		LRK53_RS13580	0.62	-0.4
2,994,261	+		LRK53_RS13580	0.62	+0.6
2,994,262	-		LRK53_RS13580	0.62	-1.1
2,994,262	-		LRK53_RS13580	0.62	-0.4
2,994,262	-		LRK53_RS13580	0.62	-1.7
2,994,264	+		LRK53_RS13580	0.62	-0.7
2,994,265	-		LRK53_RS13580	0.62	+1.7
2,994,265	-		LRK53_RS13580	0.62	-0.1
2,994,474	+		LRK53_RS13580	0.75	-0.0
2,994,474	+		LRK53_RS13580	0.75	-2.2
2,994,474	+		LRK53_RS13580	0.75	-0.4
2,994,525	+		LRK53_RS13580	0.78	-1.4
2,994,624	+		LRK53_RS13580	0.84	-1.8
2,994,624	+		LRK53_RS13580	0.84	+1.2
2,994,624	+		LRK53_RS13580	0.84	-1.4
2,994,624	+		LRK53_RS13580	0.84	-1.8
2,994,624	+		LRK53_RS13580	0.84	+0.2
2,994,624	+		LRK53_RS13580	0.84	-0.3
2,994,624	+		LRK53_RS13580	0.84	-0.3
2,994,624	+		LRK53_RS13580	0.84	-1.2
2,994,624	+		LRK53_RS13580	0.84	+1.4
2,994,624	+		LRK53_RS13580	0.84	+0.0
2,994,624	+		LRK53_RS13580	0.84	-0.7
2,994,624	+		LRK53_RS13580	0.84	-0.1
2,994,624	+		LRK53_RS13580	0.84	+0.2
2,994,625	-		LRK53_RS13580	0.84	-1.6
2,994,625	-		LRK53_RS13580	0.84	-1.8
2,994,625	-		LRK53_RS13580	0.84	-0.6
2,994,625	-		LRK53_RS13580	0.84	-2.6
2,994,625	-		LRK53_RS13580	0.84	-1.6
2,994,625	-		LRK53_RS13580	0.84	+0.4
2,994,625	-		LRK53_RS13580	0.84	-0.1
2,994,625	-		LRK53_RS13580	0.84	-0.3
2,994,625	-		LRK53_RS13580	0.84	-0.1
2,994,625	-		LRK53_RS13580	0.84	-1.1
2,994,625	-		LRK53_RS13580	0.84	+2.7
2,994,633	+		LRK53_RS13580	0.84	-2.1
2,994,633	+		LRK53_RS13580	0.84	-2.8
2,994,634	-		LRK53_RS13580	0.85	-0.6
2,994,634	-		LRK53_RS13580	0.85	+0.3
2,994,634	-		LRK53_RS13580	0.85	+0.9
2,994,634	-		LRK53_RS13580	0.85	-0.8
2,994,634	-		LRK53_RS13580	0.85	-1.2
2,994,634	-		LRK53_RS13580	0.85	-0.4
2,994,699	+		LRK53_RS13580	0.89	-0.8
2,994,699	+		LRK53_RS13580	0.89	-2.3
2,994,699	+		LRK53_RS13580	0.89	-0.3
2,994,699	+		LRK53_RS13580	0.89	-1.2
2,994,699	+		LRK53_RS13580	0.89	-1.0
2,994,699	+		LRK53_RS13580	0.89	-0.3
2,994,699	+		LRK53_RS13580	0.89	-0.7
2,994,699	+		LRK53_RS13580	0.89	-0.4
2,994,699	+		LRK53_RS13580	0.89	+1.8
2,994,699	+		LRK53_RS13580	0.89	-0.7
2,994,699	+		LRK53_RS13580	0.89	-1.0
2,994,699	+		LRK53_RS13580	0.89	+1.1
2,994,699	+		LRK53_RS13580	0.89	-1.0
2,994,699	+		LRK53_RS13580	0.89	-1.7
2,994,699	+		LRK53_RS13580	0.89	-0.2
2,994,700	-		LRK53_RS13580	0.89	-0.3
2,994,700	-		LRK53_RS13580	0.89	-0.3
2,994,700	-		LRK53_RS13580	0.89	+1.8
2,994,700	-		LRK53_RS13580	0.89	-2.9
2,994,700	-		LRK53_RS13580	0.89	+1.4
2,994,700	-		LRK53_RS13580	0.89	-0.7
2,994,700	-		LRK53_RS13580	0.89	-0.3
2,994,700	-		LRK53_RS13580	0.89	-2.2
2,994,700	-		LRK53_RS13580	0.89	-0.4
2,994,700	-		LRK53_RS13580	0.89	-0.3
2,994,700	-		LRK53_RS13580	0.89	-2.3
2,994,703	-		LRK53_RS13580	0.89	+0.0
2,994,703	-		LRK53_RS13580	0.89	+0.4
2,994,717	+		LRK53_RS13580	0.90	-1.7
2,994,718	-		LRK53_RS13580	0.90	-1.1
2,994,768	+				+0.8
2,994,768	+				+0.2
2,994,768	+				-0.8
2,994,769	-				+0.2
2,994,769	-				+1.1
2,994,771	+				-2.2
2,994,771	+				-0.7
2,994,771	+				-0.9
2,994,771	+				-1.6
2,994,771	+				-0.9
2,994,771	+				-0.4
2,994,771	+				+0.7
2,994,772	-				-1.4
2,994,772	-				-1.9
2,994,772	-				-1.5
2,994,772	-				+0.0
2,994,772	-				-1.3
2,994,772	-				+2.2
2,994,772	-				+0.7
2,994,772	-				-1.1
2,994,910	+				+0.1
2,994,910	+				-0.6
2,994,910	+				+0.7
2,994,910	+				-1.6
2,994,910	+				-0.7
2,994,910	+				+0.0
2,994,910	+				-1.0
2,994,910	+				-1.6
2,994,910	+				-0.9
2,994,910	+				+0.6
2,994,910	+				-1.0
2,994,910	+				-1.8
2,994,910	+				-0.4
2,994,910	+				-2.2
2,994,910	+				+0.2
2,994,910	+				-2.4
2,994,910	+				+0.2
2,994,910	+				-0.2
2,994,910	+				-0.1
2,994,910	+				-2.2
2,994,910	+				-0.2
2,994,910	+				-0.4
2,994,910	+				-0.5
2,994,910	+				-0.8
2,994,911	-				-0.5
2,994,911	-				+0.8
2,994,911	-				-1.2
2,994,911	-				-0.4
2,994,911	-				-1.2
2,994,911	-				-2.5
2,994,911	-				-0.7
2,994,911	-				-0.7
2,994,911	-				+0.3
2,994,911	-				-1.8
2,994,911	-				-2.4
2,994,911	-				-0.2
2,994,929	+				+0.8
2,994,929	+				-3.6
2,994,929	+				+0.5
2,994,929	+				-2.4
2,994,929	+				-0.9
2,994,929	+				-0.2
2,994,929	+				-1.5
2,994,929	+				-0.2
2,994,929	+				-2.0
2,994,929	+				-0.7
2,994,929	+				+1.5
2,994,929	+				-0.2
2,994,929	+				+1.0
2,994,929	+				-0.3
2,994,929	+				-0.8
2,994,929	+				+0.2
2,994,929	+				+1.7
2,994,929	+				-1.0
2,994,929	+				-0.6
2,994,929	+				-0.9
2,994,929	+				-1.8
2,994,929	+				-0.0
2,994,929	+				-0.8
2,994,929	+				+0.5
2,994,929	+				-0.4
2,994,929	+				-1.4
2,994,929	+				-0.5
2,994,929	+				-2.3
2,994,929	+				-0.9
2,994,930	-				-1.2
2,994,930	-				+1.6
2,994,930	-				-0.2
2,994,930	-				-2.7
2,994,930	-				-1.0
2,994,930	-				-2.0
2,994,930	-				-0.4
2,994,930	-				-2.9
2,994,930	-				-3.5
2,994,930	-				-0.4
2,994,930	-				-1.7
2,994,930	-				-3.6
2,994,930	-				+0.0
2,994,930	-				+0.7
2,994,930	-				-2.4
2,994,930	-				-1.9
2,994,930	-				+1.4
2,994,930	-				+1.0
2,994,930	-				-2.0
2,994,930	-				-0.0
2,994,930	-				-1.4
2,994,930	-				-0.2
2,994,930	-				-0.6
2,994,930	-				+2.2
2,994,930	-				-0.3
2,994,930	-				-1.2
2,994,930	-				-0.3
2,994,930	-				+1.0
2,994,930	-				-0.8
2,994,930	-				-0.8
2,994,930	-				-1.3
2,994,930	-				-1.2
2,994,930	-				-2.6
2,994,930	-				-0.0
2,994,930	-				-0.9
2,994,930	-				-0.2
2,994,930	-				-1.5
2,994,930	-				+0.4
2,994,930	-				-0.9
2,994,930	-				+0.6
2,994,930	-				-0.7
2,995,264	+		LRK53_RS13585	0.44	+1.2
2,995,264	+		LRK53_RS13585	0.44	-0.7
2,995,264	+		LRK53_RS13585	0.44	-0.8
2,995,264	+		LRK53_RS13585	0.44	-1.2
2,995,264	+		LRK53_RS13585	0.44	-0.8
2,995,264	+		LRK53_RS13585	0.44	-1.6
2,995,264	+		LRK53_RS13585	0.44	-1.2
2,995,264	+		LRK53_RS13585	0.44	-0.4
2,995,265	-		LRK53_RS13585	0.44	+0.1
2,995,265	-		LRK53_RS13585	0.44	-0.5
2,995,265	-		LRK53_RS13585	0.44	-1.6
2,995,265	-		LRK53_RS13585	0.44	-0.4
2,995,265	-		LRK53_RS13585	0.44	+0.0
2,995,265	-		LRK53_RS13585	0.44	-2.6
2,995,265	-		LRK53_RS13585	0.44	-1.5
2,995,265	-		LRK53_RS13585	0.44	-0.3
2,995,265	-		LRK53_RS13585	0.44	-0.7
2,995,265	-		LRK53_RS13585	0.44	-1.3
2,995,265	-		LRK53_RS13585	0.44	-0.6
2,995,265	-		LRK53_RS13585	0.44	+0.1
2,995,265	-		LRK53_RS13585	0.44	-1.9
2,995,265	-		LRK53_RS13585	0.44	-1.1
2,995,265	-		LRK53_RS13585	0.44	+0.8
2,995,265	-		LRK53_RS13585	0.44	+0.0
2,995,265	-		LRK53_RS13585	0.44	+2.1
2,995,265	-		LRK53_RS13585	0.44	-2.2
2,995,265	-		LRK53_RS13585	0.44	+1.0
2,995,438	+		LRK53_RS13585	0.69	-1.7
2,995,450	+		LRK53_RS13585	0.71	-1.7
2,995,450	+		LRK53_RS13585	0.71	-1.2
2,995,451	-		LRK53_RS13585	0.71	-1.5
2,995,480	+		LRK53_RS13585	0.75	-0.7
2,995,481	-		LRK53_RS13585	0.75	+1.4
2,995,525	+		LRK53_RS13585	0.82	-2.6
2,995,525	+		LRK53_RS13585	0.82	-1.5
2,995,525	+		LRK53_RS13585	0.82	-0.9
2,995,525	+		LRK53_RS13585	0.82	-0.5
2,995,525	+		LRK53_RS13585	0.82	+0.2
2,995,525	+		LRK53_RS13585	0.82	-1.3
2,995,525	+		LRK53_RS13585	0.82	-1.2
2,995,526	-		LRK53_RS13585	0.82	-0.7
2,995,526	-		LRK53_RS13585	0.82	-1.8
2,995,526	-		LRK53_RS13585	0.82	+0.7
2,995,526	-		LRK53_RS13585	0.82	-0.9
2,995,526	-		LRK53_RS13585	0.82	-1.7
2,995,526	-		LRK53_RS13585	0.82	-0.8
2,995,526	-		LRK53_RS13585	0.82	-1.4
2,995,526	-		LRK53_RS13585	0.82	-2.6