Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12915

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,854,540	+		LRK53_RS12910	0.61	-1.3
2,854,540	+		LRK53_RS12910	0.61	+0.5
2,854,540	+		LRK53_RS12910	0.61	-1.1
2,854,541	-		LRK53_RS12910	0.61	-0.4
2,854,541	-		LRK53_RS12910	0.61	-0.9
2,854,549	+		LRK53_RS12910	0.62	-1.9
2,854,550	-		LRK53_RS12910	0.62	+0.8
2,854,550	-		LRK53_RS12910	0.62	-0.1
2,854,637	-		LRK53_RS12910	0.66	-0.5
2,854,672	+		LRK53_RS12910	0.68	-0.7
2,854,672	+		LRK53_RS12910	0.68	-0.7
2,854,672	+		LRK53_RS12910	0.68	-0.4
2,854,672	+		LRK53_RS12910	0.68	-1.5
2,854,673	-		LRK53_RS12910	0.68	-1.2
2,854,673	-		LRK53_RS12910	0.68	-2.3
2,854,693	+		LRK53_RS12910	0.69	+3.0
2,854,694	-		LRK53_RS12910	0.69	-0.8
2,854,694	-		LRK53_RS12910	0.69	-0.1
2,854,718	-		LRK53_RS12910	0.70	+0.0
2,854,718	-		LRK53_RS12910	0.70	+0.4
2,854,723	+		LRK53_RS12910	0.71	+0.0
2,854,724	-		LRK53_RS12910	0.71	-0.9
2,854,834	+		LRK53_RS12910	0.76	-0.3
2,854,834	+		LRK53_RS12910	0.76	-0.8
2,854,834	+		LRK53_RS12910	0.76	-1.0
2,854,834	+		LRK53_RS12910	0.76	-0.1
2,854,835	-		LRK53_RS12910	0.76	+0.2
2,854,846	+		LRK53_RS12910	0.77	+0.8
2,854,846	+		LRK53_RS12910	0.77	-0.1
2,854,846	+		LRK53_RS12910	0.77	-1.8
2,854,846	+		LRK53_RS12910	0.77	-0.9
2,854,846	+		LRK53_RS12910	0.77	-1.3
2,854,847	-		LRK53_RS12910	0.77	+0.0
2,854,847	-		LRK53_RS12910	0.77	-1.3
2,854,847	-		LRK53_RS12910	0.77	-0.2
2,854,847	-		LRK53_RS12910	0.77	-0.9
2,854,847	-		LRK53_RS12910	0.77	-0.5
2,854,894	+		LRK53_RS12910	0.79	-0.9
2,854,894	+		LRK53_RS12910	0.79	-0.3
2,854,894	+		LRK53_RS12910	0.79	-2.3
2,854,894	+		LRK53_RS12910	0.79	-3.2
2,854,894	+		LRK53_RS12910	0.79	+0.5
2,854,894	+		LRK53_RS12910	0.79	-0.6
2,854,894	+		LRK53_RS12910	0.79	-3.1
2,854,894	+		LRK53_RS12910	0.79	+1.7
2,854,894	+		LRK53_RS12910	0.79	-1.3
2,854,894	+		LRK53_RS12910	0.79	-2.0
2,854,895	-		LRK53_RS12910	0.79	-0.8
2,854,895	-		LRK53_RS12910	0.79	-0.9
2,854,895	-		LRK53_RS12910	0.79	-1.4
2,854,895	-		LRK53_RS12910	0.79	-1.8
2,854,895	-		LRK53_RS12910	0.79	+0.0
2,854,895	-		LRK53_RS12910	0.79	+0.2
2,854,895	-		LRK53_RS12910	0.79	-0.4
2,854,895	-		LRK53_RS12910	0.79	+0.5
2,854,895	-		LRK53_RS12910	0.79	-0.9
2,854,895	-		LRK53_RS12910	0.79	-0.3
2,854,924	+		LRK53_RS12910	0.81	+0.9
2,854,972	+		LRK53_RS12910	0.83	-0.8
2,854,973	-		LRK53_RS12910	0.83	-0.6
2,854,973	-		LRK53_RS12910	0.83	-1.8
2,854,984	+		LRK53_RS12910	0.84	-0.8
2,854,984	+		LRK53_RS12910	0.84	-2.2
2,854,984	+		LRK53_RS12910	0.84	-0.9
2,854,984	+		LRK53_RS12910	0.84	-0.9
2,854,984	+		LRK53_RS12910	0.84	+0.1
2,854,984	+		LRK53_RS12910	0.84	-0.6
2,854,984	+		LRK53_RS12910	0.84	-1.1
2,854,984	+		LRK53_RS12910	0.84	-0.3
2,854,985	-		LRK53_RS12910	0.84	-1.0
2,854,985	-		LRK53_RS12910	0.84	-0.1
2,854,985	-		LRK53_RS12910	0.84	-1.4
2,854,985	-		LRK53_RS12910	0.84	+0.4
2,855,069	+		LRK53_RS12910	0.88	-0.9
2,855,070	-		LRK53_RS12910	0.88	-0.8
2,855,170	+				+0.2
2,855,170	+				-2.2
2,855,170	+				-0.7
2,855,171	-				-2.0
2,855,171	-				+0.6
2,855,171	-				-0.1
2,855,171	-				+1.6
2,855,171	-				-0.5
2,855,171	-				-0.1
2,855,171	-				-0.2
2,855,171	-				+1.1
2,855,171	-				-0.9
2,855,171	-				-0.3
2,855,197	+				-0.4
2,855,197	+				-0.5
2,855,198	-				-0.3
2,855,198	-				-1.1
2,855,198	-				-0.6
2,855,198	-				-0.0
2,855,224	+				-0.1
2,855,224	+				-0.1
2,855,224	+				-1.9
2,855,224	+				-1.4
2,855,224	+				+0.2
2,855,224	+				-1.1
2,855,224	+				-1.5
2,855,224	+				-0.5
2,855,224	+				-0.8
2,855,224	+				-0.9
2,855,224	+				-1.1
2,855,224	+				+0.0
2,855,225	-				+0.4
2,855,225	-				+0.7
2,855,225	-				-2.2
2,855,225	-				+1.0
2,855,225	-				-0.4
2,855,225	-				-0.9
2,855,225	-				-0.9
2,855,293	-				-1.5
2,855,293	-				+1.0
2,855,426	+				+0.2
2,855,426	+				-0.3
2,855,588	+				-1.1
2,855,588	+				-0.3
2,855,588	+				-1.2
2,855,588	+				-2.1
2,855,588	+				-1.8
2,855,589	-				+0.5
2,855,589	-				-2.0
2,855,589	-				-0.1
2,855,589	-				-0.7
2,855,624	+				-1.6
2,855,624	+				+0.2
2,855,624	+				-2.3
2,855,624	+				-1.8
2,855,624	+				-2.2
2,855,624	+				-1.1
2,855,624	+				-0.5
2,855,624	+				-1.5
2,855,624	+				+0.0
2,855,624	+				-3.7
2,855,624	+				+0.4
2,855,624	+				-0.4
2,855,624	+				+0.4
2,855,624	+				+0.1
2,855,625	-				-0.4
2,855,625	-				-1.9
2,855,625	-				+0.0
2,855,625	-				+1.0
2,855,625	-				-1.9
2,855,625	-				-0.4
2,855,625	-				-1.3
2,855,625	-				+0.7
2,855,626	+				+1.0
2,855,626	+				+0.0
2,855,626	+				-0.7
2,855,627	-				-1.4
2,855,684	+				-1.5
2,855,684	+				-2.7
2,855,684	+				-0.8
2,855,684	+				-0.9
2,855,684	+				-1.1
2,855,684	+				-0.2
2,855,685	-				+0.2
2,855,685	-				-2.0
2,855,685	-				+0.5
2,855,685	-				+0.0
2,855,754	-				-0.5
2,855,783	+		LRK53_RS12915	0.10	+0.2
2,855,783	+		LRK53_RS12915	0.10	+1.6
2,855,784	-		LRK53_RS12915	0.11	-1.3
2,855,784	-		LRK53_RS12915	0.11	+1.1
2,856,002	+		LRK53_RS12915	0.18	-0.7
2,856,002	+		LRK53_RS12915	0.18	-1.4
2,856,002	+		LRK53_RS12915	0.18	-0.4
2,856,005	+		LRK53_RS12915	0.19	-1.1
2,856,005	+		LRK53_RS12915	0.19	-0.5
2,856,005	+		LRK53_RS12915	0.19	-0.9
2,856,005	+		LRK53_RS12915	0.19	-2.0
2,856,005	+		LRK53_RS12915	0.19	-0.1
2,856,005	+		LRK53_RS12915	0.19	+0.6
2,856,005	+		LRK53_RS12915	0.19	-0.3
2,856,005	+		LRK53_RS12915	0.19	+0.7
2,856,005	+		LRK53_RS12915	0.19	-0.4
2,856,005	+		LRK53_RS12915	0.19	-1.1
2,856,005	+		LRK53_RS12915	0.19	-1.0
2,856,005	+		LRK53_RS12915	0.19	+0.0
2,856,005	+		LRK53_RS12915	0.19	-0.6
2,856,005	+		LRK53_RS12915	0.19	-1.7
2,856,005	+		LRK53_RS12915	0.19	-0.7
2,856,006	-		LRK53_RS12915	0.19	-1.2
2,856,006	-		LRK53_RS12915	0.19	-1.2
2,856,006	-		LRK53_RS12915	0.19	+0.7
2,856,006	-		LRK53_RS12915	0.19	-1.0
2,856,006	-		LRK53_RS12915	0.19	-2.3
2,856,006	-		LRK53_RS12915	0.19	+0.2
2,856,006	-		LRK53_RS12915	0.19	-2.9
2,856,006	-		LRK53_RS12915	0.19	-0.3
2,856,006	-		LRK53_RS12915	0.19	-0.3
2,856,068	+		LRK53_RS12915	0.21	-1.8
2,856,095	+		LRK53_RS12915	0.22	-0.6
2,856,095	+		LRK53_RS12915	0.22	-1.0
2,856,095	+		LRK53_RS12915	0.22	+0.5
2,856,095	+		LRK53_RS12915	0.22	-1.7
2,856,095	+		LRK53_RS12915	0.22	-1.5
2,856,095	+		LRK53_RS12915	0.22	+0.9
2,856,095	+		LRK53_RS12915	0.22	-0.5
2,856,095	+		LRK53_RS12915	0.22	-0.9
2,856,095	+		LRK53_RS12915	0.22	-0.8
2,856,095	+		LRK53_RS12915	0.22	-0.9
2,856,095	+		LRK53_RS12915	0.22	-1.3
2,856,095	+		LRK53_RS12915	0.22	-1.7
2,856,096	-		LRK53_RS12915	0.22	+1.3
2,856,096	-		LRK53_RS12915	0.22	-2.5
2,856,096	-		LRK53_RS12915	0.22	-2.0
2,856,096	-		LRK53_RS12915	0.22	-0.5
2,856,096	-		LRK53_RS12915	0.22	-1.0
2,856,096	-		LRK53_RS12915	0.22	+0.5
2,856,096	-		LRK53_RS12915	0.22	-0.8
2,856,096	-		LRK53_RS12915	0.22	-1.3
2,856,096	-		LRK53_RS12915	0.22	-1.8
2,856,179	+		LRK53_RS12915	0.25	-2.9
2,856,179	+		LRK53_RS12915	0.25	-1.8
2,856,179	+		LRK53_RS12915	0.25	-0.4
2,856,180	-		LRK53_RS12915	0.25	-1.6
2,856,180	-		LRK53_RS12915	0.25	+0.0
2,856,180	-		LRK53_RS12915	0.25	-1.5
2,856,180	-		LRK53_RS12915	0.25	-0.7
2,856,180	-		LRK53_RS12915	0.25	-1.3
2,856,180	-		LRK53_RS12915	0.25	-0.1
2,856,180	-		LRK53_RS12915	0.25	-0.2
2,856,212	+		LRK53_RS12915	0.26	-0.5
2,856,213	-		LRK53_RS12915	0.26	-0.9
2,856,213	-		LRK53_RS12915	0.26	-1.6
2,856,213	-		LRK53_RS12915	0.26	-1.7
2,856,227	+		LRK53_RS12915	0.27	-0.1
2,856,227	+		LRK53_RS12915	0.27	-0.1
2,856,228	-		LRK53_RS12915	0.27	-0.5
2,856,228	-		LRK53_RS12915	0.27	+1.1
2,856,228	-		LRK53_RS12915	0.27	-1.3
2,856,228	-		LRK53_RS12915	0.27	-0.5
2,856,228	-		LRK53_RS12915	0.27	-0.7
2,856,239	+		LRK53_RS12915	0.27	+0.2
2,856,239	+		LRK53_RS12915	0.27	-3.1
2,856,239	+		LRK53_RS12915	0.27	+0.2
2,856,239	+		LRK53_RS12915	0.27	+0.7
2,856,239	+		LRK53_RS12915	0.27	-0.2
2,856,240	-		LRK53_RS12915	0.27	-1.2
2,856,240	-		LRK53_RS12915	0.27	-0.1
2,856,240	-		LRK53_RS12915	0.27	+0.0
2,856,240	-		LRK53_RS12915	0.27	-0.7
2,856,240	-		LRK53_RS12915	0.27	-1.0
2,856,240	-		LRK53_RS12915	0.27	-1.3
2,856,369	-		LRK53_RS12915	0.32	+1.6
2,856,395	+		LRK53_RS12915	0.33	-0.1
2,856,395	+		LRK53_RS12915	0.33	-0.7
2,856,395	+		LRK53_RS12915	0.33	+0.6
2,856,395	+		LRK53_RS12915	0.33	+1.5
2,856,395	+		LRK53_RS12915	0.33	-1.5
2,856,396	-		LRK53_RS12915	0.33	+0.7
2,856,396	-		LRK53_RS12915	0.33	+0.1
2,856,396	-		LRK53_RS12915	0.33	-1.7
2,856,396	-		LRK53_RS12915	0.33	-1.2
2,856,396	-		LRK53_RS12915	0.33	-0.6
2,856,396	-		LRK53_RS12915	0.33	-0.1
2,856,396	-		LRK53_RS12915	0.33	-2.3
2,856,396	-		LRK53_RS12915	0.33	+0.1
2,856,396	-		LRK53_RS12915	0.33	-1.0
2,856,528	-		LRK53_RS12915	0.38	+0.0
2,856,572	+		LRK53_RS12915	0.39	+0.0
2,856,572	+		LRK53_RS12915	0.39	-1.2
2,856,572	+		LRK53_RS12915	0.39	-2.8
2,856,573	-		LRK53_RS12915	0.39	+2.9
2,856,573	-		LRK53_RS12915	0.39	-1.8
2,856,573	-		LRK53_RS12915	0.39	+0.3
2,856,581	+		LRK53_RS12915	0.40	-0.9
2,856,581	+		LRK53_RS12915	0.40	-1.8
2,856,582	-		LRK53_RS12915	0.40	-0.7
2,856,582	-		LRK53_RS12915	0.40	-1.5
2,856,632	+		LRK53_RS12915	0.41	-3.2
2,856,632	+		LRK53_RS12915	0.41	-0.3
2,856,633	-		LRK53_RS12915	0.41	+1.7
2,856,704	+		LRK53_RS12915	0.44	-1.1
2,856,704	+		LRK53_RS12915	0.44	-0.3
2,856,704	+		LRK53_RS12915	0.44	-0.8
2,856,704	+		LRK53_RS12915	0.44	+0.2
2,856,704	+		LRK53_RS12915	0.44	-1.0
2,856,704	+		LRK53_RS12915	0.44	-2.1
2,856,704	+		LRK53_RS12915	0.44	-1.0
2,856,704	+		LRK53_RS12915	0.44	-1.4
2,856,704	+		LRK53_RS12915	0.44	+0.5
2,856,704	+		LRK53_RS12915	0.44	-1.3
2,856,705	-		LRK53_RS12915	0.44	-0.3
2,856,705	-		LRK53_RS12915	0.44	+1.6
2,856,705	-		LRK53_RS12915	0.44	-0.3
2,856,705	-		LRK53_RS12915	0.44	-1.3
2,856,705	-		LRK53_RS12915	0.44	+0.2
2,856,705	-		LRK53_RS12915	0.44	-0.7
2,856,737	+		LRK53_RS12915	0.45	-1.1
2,856,737	+		LRK53_RS12915	0.45	-0.8
2,856,737	+		LRK53_RS12915	0.45	-2.4
2,856,737	+		LRK53_RS12915	0.45	-0.0
2,856,738	-		LRK53_RS12915	0.45	-0.4
2,856,738	-		LRK53_RS12915	0.45	-0.3
2,856,738	-		LRK53_RS12915	0.45	-1.8
2,856,738	-		LRK53_RS12915	0.45	-0.8
2,856,738	-		LRK53_RS12915	0.45	+0.2
2,856,776	+		LRK53_RS12915	0.47	-0.7
2,856,776	+		LRK53_RS12915	0.47	-0.8
2,856,776	+		LRK53_RS12915	0.47	+0.2
2,856,777	-		LRK53_RS12915	0.47	+0.5
2,856,777	-		LRK53_RS12915	0.47	+1.0
2,856,830	+		LRK53_RS12915	0.49	-1.1
2,856,830	+		LRK53_RS12915	0.49	+0.0
2,856,830	+		LRK53_RS12915	0.49	-2.0
2,856,830	+		LRK53_RS12915	0.49	-1.0
2,856,830	+		LRK53_RS12915	0.49	-2.3
2,856,830	+		LRK53_RS12915	0.49	-0.7
2,856,830	+		LRK53_RS12915	0.49	-1.0
2,856,831	-		LRK53_RS12915	0.49	+0.5
2,856,831	-		LRK53_RS12915	0.49	-0.0
2,856,831	-		LRK53_RS12915	0.49	-1.0
2,856,831	-		LRK53_RS12915	0.49	-0.8
2,856,831	-		LRK53_RS12915	0.49	-1.8
2,857,001	+		LRK53_RS12915	0.55	-0.8
2,857,001	+		LRK53_RS12915	0.55	-0.8
2,857,001	+		LRK53_RS12915	0.55	-0.3
2,857,001	+		LRK53_RS12915	0.55	-2.5
2,857,001	+		LRK53_RS12915	0.55	-0.4
2,857,001	+		LRK53_RS12915	0.55	-0.6
2,857,001	+		LRK53_RS12915	0.55	-0.2
2,857,001	+		LRK53_RS12915	0.55	+0.0
2,857,002	-		LRK53_RS12915	0.55	-0.5
2,857,002	-		LRK53_RS12915	0.55	+0.7
2,857,002	-		LRK53_RS12915	0.55	+0.1
2,857,002	-		LRK53_RS12915	0.55	-2.0
2,857,002	-		LRK53_RS12915	0.55	-0.3
2,857,002	-		LRK53_RS12915	0.55	-0.5
2,857,002	-		LRK53_RS12915	0.55	-2.1
2,857,002	-		LRK53_RS12915	0.55	-0.1
2,857,025	+		LRK53_RS12915	0.56	-1.1
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2,857,026	-		LRK53_RS12915	0.56	-0.1
2,857,061	+		LRK53_RS12915	0.57	-0.4
2,857,061	+		LRK53_RS12915	0.57	-2.7
2,857,061	+		LRK53_RS12915	0.57	-0.5
2,857,061	+		LRK53_RS12915	0.57	-2.3
2,857,061	+		LRK53_RS12915	0.57	-0.3
2,857,062	-		LRK53_RS12915	0.57	-1.5
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2,857,095	-		LRK53_RS12915	0.58	-1.1
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2,857,206	+		LRK53_RS12915	0.62	+0.1
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2,857,340	+		LRK53_RS12915	0.67	-1.1
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2,857,340	+		LRK53_RS12915	0.67	-1.3
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2,857,341	-		LRK53_RS12915	0.67	+1.3
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2,857,389	-		LRK53_RS12915	0.69	+2.0
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2,857,766	+		LRK53_RS12915	0.83	+1.2
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2,858,024	+				-0.0
2,858,221	+				+0.1
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2,858,245	+				+2.3
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2,858,245	+				+1.8
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2,858,246	-				-2.0
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2,858,246	-				-3.0
2,858,246	-				-3.1
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2,858,346	+				-2.2
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2,858,379	+				-1.5
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2,859,022	-		LRK53_RS12920	0.45	-2.8
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2,859,022	-		LRK53_RS12920	0.45	-1.1
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2,859,022	-		LRK53_RS12920	0.45	+0.0
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