Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11675

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,600,406	+				-1.0
2,600,406	+				-1.3
2,600,406	+				-1.3
2,600,406	+				-2.0
2,600,407	-				-1.8
2,600,455	-				-1.3
2,600,455	-				-2.0
2,600,706	+				-0.4
2,600,706	+				-2.5
2,600,707	-				+2.9
2,600,707	-				+0.8
2,600,712	-				-0.0
2,600,712	-				+0.3
2,600,774	-				-0.4
2,600,804	+				-0.4
2,600,805	-				-0.2
2,600,805	-				-1.5
2,600,899	-				+1.0
2,601,348	-				-1.2
2,601,348	-				+0.6
2,601,348	-				-0.7
2,601,419	+		LRK53_RS11675	0.13	-0.0
2,601,420	-		LRK53_RS11675	0.13	-1.2
2,601,427	+		LRK53_RS11675	0.14	-2.3
2,601,427	+		LRK53_RS11675	0.14	-1.9
2,601,427	+		LRK53_RS11675	0.14	-0.1
2,601,428	-		LRK53_RS11675	0.14	-1.8
2,601,428	-		LRK53_RS11675	0.14	+0.0
2,601,428	-		LRK53_RS11675	0.14	-2.3
2,601,441	+		LRK53_RS11675	0.15	-0.8
2,601,441	+		LRK53_RS11675	0.15	+0.4
2,601,442	-		LRK53_RS11675	0.15	-1.0
2,601,442	-		LRK53_RS11675	0.15	+1.5
2,601,452	-		LRK53_RS11675	0.17	-1.5
2,601,452	-		LRK53_RS11675	0.17	-0.9
2,601,485	-		LRK53_RS11675	0.20	-2.4
2,601,536	-		LRK53_RS11675	0.26	+0.2
2,601,536	-		LRK53_RS11675	0.26	+0.0
2,601,536	-		LRK53_RS11675	0.26	-0.3
2,601,553	+		LRK53_RS11675	0.27	-0.5
2,601,553	+		LRK53_RS11675	0.27	+0.0
2,601,554	-		LRK53_RS11675	0.28	+0.0
2,601,655	+		LRK53_RS11675	0.38	+0.7
2,601,762	+		LRK53_RS11675	0.50	+0.6
2,601,763	-		LRK53_RS11675	0.50	-1.1
2,601,822	+		LRK53_RS11675	0.56	-1.9
2,601,822	+		LRK53_RS11675	0.56	-0.0
2,601,823	-		LRK53_RS11675	0.57	-0.6
2,601,917	+		LRK53_RS11675	0.67	-1.8
2,601,957	-		LRK53_RS11675	0.71	-2.9
2,601,974	-		LRK53_RS11675	0.73	-0.3
2,601,974	-		LRK53_RS11675	0.73	-0.3
2,602,013	+		LRK53_RS11675	0.77	-3.2
2,602,013	+		LRK53_RS11675	0.77	-1.8
2,602,013	+		LRK53_RS11675	0.77	-1.8
2,602,014	-		LRK53_RS11675	0.77	+0.2
2,602,053	+		LRK53_RS11675	0.81	-0.5
2,602,198	+				-0.5
2,602,201	-				-2.2
2,602,219	+				+1.0
2,602,220	-				-1.9
2,602,237	+				-0.2
2,602,238	-				-1.3
2,602,282	+				-2.1
2,602,282	+				-0.7
2,602,282	+				-1.9
2,602,282	+				-0.1
2,602,282	+				+1.0
2,602,282	+				+0.3
2,602,283	-				-1.3
2,602,283	-				-0.8
2,602,283	-				-1.0
2,602,283	-				+0.0
2,602,283	-				-2.7
2,602,283	-				-1.6
2,602,283	-				-3.0
2,602,283	-				-0.7
2,602,285	+				-3.5
2,602,334	+				-0.4
2,602,351	+				-0.7
2,602,351	+				-2.0
2,602,351	+				-0.5
2,602,351	+				-1.0
2,602,352	-				-1.7
2,602,352	-				-1.3
2,602,352	-				+1.9
2,602,352	-				-1.6
2,602,386	+				+1.8
2,602,386	+				-0.1
2,602,386	+				-3.0
2,602,387	-				-1.0
2,602,387	-				-0.9
2,602,387	-				-3.1
2,602,387	-				-1.1
2,602,390	+				-2.2
2,602,390	+				-0.1
2,602,390	+				+0.0
2,602,390	+				-2.4
2,602,390	+				-1.2
2,602,390	+				-1.7
2,602,390	+				-1.1
2,602,390	+				-1.3
2,602,390	+				-3.3
2,602,390	+				-1.0
2,602,390	+				-0.7
2,602,391	-				-1.0
2,602,391	-				-0.3
2,602,391	-				+0.0
2,602,391	-				-1.8
2,602,391	-				-1.3
2,602,391	-				-1.5
2,602,391	-				-2.0
2,602,391	-				-0.1
2,602,428	+		LRK53_RS11680	0.10	-1.6
2,602,429	-		LRK53_RS11680	0.10	-0.6
2,602,620	+		LRK53_RS11680	0.24	-0.1
2,602,620	+		LRK53_RS11680	0.24	+0.2
2,602,620	+		LRK53_RS11680	0.24	-0.1
2,602,620	+		LRK53_RS11680	0.24	-0.9
2,602,620	+		LRK53_RS11680	0.24	-1.7
2,602,621	-		LRK53_RS11680	0.24	-0.1
2,602,621	-		LRK53_RS11680	0.24	-1.0
2,602,621	-		LRK53_RS11680	0.24	+0.2
2,602,787	+		LRK53_RS11680	0.36	-1.2
2,602,788	-		LRK53_RS11680	0.36	-1.7
2,602,788	-		LRK53_RS11680	0.36	-0.7
2,602,788	-		LRK53_RS11680	0.36	+1.2
2,602,788	-		LRK53_RS11680	0.36	-0.3
2,602,789	+		LRK53_RS11680	0.36	+1.4
2,602,789	+		LRK53_RS11680	0.36	+0.0
2,602,789	+		LRK53_RS11680	0.36	-3.2
2,602,789	+		LRK53_RS11680	0.36	-0.1
2,602,790	-		LRK53_RS11680	0.36	-1.2
2,602,790	-		LRK53_RS11680	0.36	+1.2
2,602,790	-		LRK53_RS11680	0.36	+0.0
2,602,790	-		LRK53_RS11680	0.36	-2.2
2,602,790	-		LRK53_RS11680	0.36	-3.3
2,602,797	+		LRK53_RS11680	0.36	-1.5
2,602,797	+		LRK53_RS11680	0.36	+1.0
2,602,797	+		LRK53_RS11680	0.36	+2.2
2,602,798	-		LRK53_RS11680	0.36	+0.5
2,602,798	-		LRK53_RS11680	0.36	+0.2
2,602,798	-		LRK53_RS11680	0.36	-0.7
2,602,798	-		LRK53_RS11680	0.36	-0.7
2,602,852	+		LRK53_RS11680	0.40	-1.8
2,602,852	+		LRK53_RS11680	0.40	+1.0
2,602,852	+		LRK53_RS11680	0.40	-1.1
2,602,852	+		LRK53_RS11680	0.40	-1.5
2,602,853	-		LRK53_RS11680	0.40	-1.9
2,602,853	-		LRK53_RS11680	0.40	-0.7
2,602,853	-		LRK53_RS11680	0.40	-0.6
2,602,853	-		LRK53_RS11680	0.40	-2.1
2,602,853	-		LRK53_RS11680	0.40	-0.3
2,602,853	-		LRK53_RS11680	0.40	-1.0
2,602,927	+		LRK53_RS11680	0.45	+0.1
2,602,927	+		LRK53_RS11680	0.45	+1.0
2,602,927	+		LRK53_RS11680	0.45	-0.4
2,602,927	+		LRK53_RS11680	0.45	-0.4
2,602,928	-		LRK53_RS11680	0.45	-1.5
2,602,975	+		LRK53_RS11680	0.49	-0.9
2,602,978	+		LRK53_RS11680	0.49	-2.6
2,602,979	-		LRK53_RS11680	0.49	-1.2
2,603,017	+		LRK53_RS11680	0.52	+0.0
2,603,017	+		LRK53_RS11680	0.52	-0.7
2,603,017	+		LRK53_RS11680	0.52	-1.8
2,603,017	+		LRK53_RS11680	0.52	+0.4
2,603,017	+		LRK53_RS11680	0.52	-0.7
2,603,018	-		LRK53_RS11680	0.52	-1.1
2,603,018	-		LRK53_RS11680	0.52	-2.0
2,603,018	-		LRK53_RS11680	0.52	+0.2
2,603,018	-		LRK53_RS11680	0.52	+0.9
2,603,018	-		LRK53_RS11680	0.52	-0.4
2,603,018	-		LRK53_RS11680	0.52	-3.2
2,603,128	+		LRK53_RS11680	0.60	-2.0
2,603,128	+		LRK53_RS11680	0.60	+0.5
2,603,128	+		LRK53_RS11680	0.60	-0.9
2,603,128	+		LRK53_RS11680	0.60	-1.3
2,603,128	+		LRK53_RS11680	0.60	-1.3
2,603,129	-		LRK53_RS11680	0.60	+0.7
2,603,129	-		LRK53_RS11680	0.60	-1.8
2,603,129	-		LRK53_RS11680	0.60	-1.0
2,603,129	-		LRK53_RS11680	0.60	-0.7