Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11100

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,478,177	+		LRK53_RS11090	0.45	-1.5
2,478,177	+		LRK53_RS11090	0.45	+0.7
2,478,177	+		LRK53_RS11090	0.45	-0.1
2,478,177	+		LRK53_RS11090	0.45	-0.7
2,478,177	+		LRK53_RS11090	0.45	+0.6
2,478,178	-		LRK53_RS11090	0.45	-1.5
2,478,178	-		LRK53_RS11090	0.45	+0.7
2,478,178	-		LRK53_RS11090	0.45	-2.0
2,478,178	-		LRK53_RS11090	0.45	+0.7
2,478,343	+		LRK53_RS11090	0.60	+1.4
2,478,343	+		LRK53_RS11090	0.60	-1.4
2,478,343	+		LRK53_RS11090	0.60	-0.9
2,478,343	+		LRK53_RS11090	0.60	-1.7
2,478,344	-		LRK53_RS11090	0.60	-1.4
2,478,344	-		LRK53_RS11090	0.60	-1.1
2,478,363	+		LRK53_RS11090	0.61	-1.4
2,478,363	+		LRK53_RS11090	0.61	+0.2
2,478,363	+		LRK53_RS11090	0.61	-0.5
2,478,363	+		LRK53_RS11090	0.61	+0.2
2,478,363	+		LRK53_RS11090	0.61	-1.4
2,478,364	-		LRK53_RS11090	0.62	-1.6
2,478,364	-		LRK53_RS11090	0.62	+0.2
2,478,364	-		LRK53_RS11090	0.62	-0.5
2,478,364	-		LRK53_RS11090	0.62	-2.1
2,478,364	-		LRK53_RS11090	0.62	+1.1
2,478,405	+		LRK53_RS11090	0.65	+2.0
2,478,405	+		LRK53_RS11090	0.65	-1.7
2,478,405	+		LRK53_RS11090	0.65	-3.1
2,478,406	-		LRK53_RS11090	0.65	-1.2
2,478,459	+		LRK53_RS11090	0.70	-1.0
2,478,460	-		LRK53_RS11090	0.70	-1.5
2,478,460	-		LRK53_RS11090	0.70	-0.2
2,478,460	-		LRK53_RS11090	0.70	-0.3
2,478,460	-		LRK53_RS11090	0.70	+0.4
2,478,460	-		LRK53_RS11090	0.70	-4.2
2,478,460	-		LRK53_RS11090	0.70	-0.8
2,478,691	+				-0.7
2,478,691	+				-0.0
2,478,691	+				+2.4
2,478,691	+				+0.2
2,478,692	-				-0.2
2,478,692	-				-0.8
2,478,692	-				-0.3
2,478,734	+				+1.3
2,478,734	+				+0.3
2,478,734	+				-0.4
2,478,734	+				-0.2
2,478,734	+				-0.3
2,478,734	+				+0.3
2,478,734	+				+1.2
2,478,734	+				+0.1
2,478,734	+				+0.2
2,478,734	+				-0.0
2,478,734	+				-1.3
2,478,735	-				+1.4
2,478,735	-				+0.3
2,478,735	-				-1.8
2,478,735	-				-2.2
2,478,735	-				+3.2
2,478,735	-				-1.3
2,478,735	-				-1.9
2,478,735	-				-0.5
2,478,735	-				-1.6
2,478,735	-				-3.1
2,478,735	-				+1.0
2,478,899	+		LRK53_RS11095	0.31	-1.4
2,478,960	+		LRK53_RS11095	0.54	-0.5
2,478,960	+		LRK53_RS11095	0.54	-1.7
2,478,960	+		LRK53_RS11095	0.54	-0.2
2,478,960	+		LRK53_RS11095	0.54	-2.0
2,478,961	-		LRK53_RS11095	0.54	-0.7
2,479,004	+		LRK53_RS11095	0.70	-0.7
2,479,004	+		LRK53_RS11095	0.70	-1.0
2,479,004	+		LRK53_RS11095	0.70	+0.1
2,479,005	-		LRK53_RS11095	0.71	-0.3
2,479,005	-		LRK53_RS11095	0.71	+1.4
2,479,005	-		LRK53_RS11095	0.71	-1.7
2,479,005	-		LRK53_RS11095	0.71	+0.6
2,479,079	+				-2.3
2,479,079	+				-1.0
2,479,079	+				+1.6
2,479,079	+				-0.3
2,479,080	-				-0.3
2,479,080	-				+0.7
2,479,262	+		LRK53_RS11100	0.10	+0.5
2,479,262	+		LRK53_RS11100	0.10	-0.2
2,479,262	+		LRK53_RS11100	0.10	-0.7
2,479,262	+		LRK53_RS11100	0.10	-0.6
2,479,263	-		LRK53_RS11100	0.10	-0.8
2,479,263	-		LRK53_RS11100	0.10	-2.7
2,479,263	-		LRK53_RS11100	0.10	-2.7
2,479,263	-		LRK53_RS11100	0.10	-1.3
2,479,263	-		LRK53_RS11100	0.10	-0.8
2,479,263	-		LRK53_RS11100	0.10	-0.9
2,479,263	-		LRK53_RS11100	0.10	-2.4
2,479,263	-		LRK53_RS11100	0.10	-2.2
2,479,514	+		LRK53_RS11100	0.26	-0.2
2,479,514	+		LRK53_RS11100	0.26	-2.0
2,479,514	+		LRK53_RS11100	0.26	-1.3
2,479,514	+		LRK53_RS11100	0.26	+0.3
2,479,514	+		LRK53_RS11100	0.26	-0.8
2,479,515	-		LRK53_RS11100	0.26	-0.8
2,479,515	-		LRK53_RS11100	0.26	-2.3
2,479,515	-		LRK53_RS11100	0.26	-1.2
2,479,515	-		LRK53_RS11100	0.26	-1.5
2,479,515	-		LRK53_RS11100	0.26	+0.5
2,479,515	-		LRK53_RS11100	0.26	-3.4
2,479,774	+		LRK53_RS11100	0.43	+1.1
2,479,774	+		LRK53_RS11100	0.43	-1.1
2,479,775	-		LRK53_RS11100	0.43	-1.6
2,479,775	-		LRK53_RS11100	0.43	-0.7
2,479,775	-		LRK53_RS11100	0.43	+0.9
2,479,777	+		LRK53_RS11100	0.43	+2.3
2,479,777	+		LRK53_RS11100	0.43	-0.6
2,479,777	+		LRK53_RS11100	0.43	-1.5
2,479,777	+		LRK53_RS11100	0.43	-1.8
2,479,777	+		LRK53_RS11100	0.43	-0.5
2,479,777	+		LRK53_RS11100	0.43	-0.0
2,479,778	-		LRK53_RS11100	0.43	-1.7
2,479,778	-		LRK53_RS11100	0.43	-0.0
2,479,778	-		LRK53_RS11100	0.43	-0.5
2,479,778	-		LRK53_RS11100	0.43	+0.1
2,479,778	-		LRK53_RS11100	0.43	+0.7
2,479,778	-		LRK53_RS11100	0.43	-1.2
2,479,825	+		LRK53_RS11100	0.46	+0.4
2,479,825	+		LRK53_RS11100	0.46	-1.2
2,479,825	+		LRK53_RS11100	0.46	-0.0
2,479,826	-		LRK53_RS11100	0.46	-0.3
2,479,826	-		LRK53_RS11100	0.46	-0.0
2,479,826	-		LRK53_RS11100	0.46	-2.2
2,479,826	-		LRK53_RS11100	0.46	-0.8
2,479,826	-		LRK53_RS11100	0.46	-1.2
2,480,459	+		LRK53_RS11100	0.86	-0.1
2,480,527	+				-0.8
2,480,527	+				+0.2
2,480,527	+				+0.3
2,480,527	+				-2.6
2,480,527	+				-1.0
2,480,528	-				+1.0
2,480,528	-				-0.5
2,480,528	-				-1.1
2,480,528	-				+0.2
2,480,528	-				-2.1
2,480,531	+				-0.0
2,480,531	+				-1.7
2,480,531	+				+0.6
2,480,531	+				+0.2
2,480,531	+				+0.4
2,480,531	+				+0.5
2,480,531	+				-0.4
2,480,531	+				-0.6
2,480,531	+				-0.6
2,480,531	+				-1.1
2,480,531	+				+1.0
2,480,531	+				-0.0
2,480,532	-				+2.4
2,480,532	-				+0.4
2,480,532	-				-1.8
2,480,532	-				+0.1
2,480,532	-				-0.2
2,480,532	-				-0.3
2,480,532	-				+1.4
2,480,532	-				-1.9
2,480,532	-				-2.1
2,480,532	-				+0.5
2,480,612	+				+0.4
2,480,649	+				+1.5
2,480,649	+				-0.2
2,480,649	+				-1.0
2,480,730	+		LRK53_RS11105	0.13	-0.7
2,480,730	+		LRK53_RS11105	0.13	-0.7
2,480,730	+		LRK53_RS11105	0.13	-0.0
2,480,730	+		LRK53_RS11105	0.13	-1.7
2,480,730	+		LRK53_RS11105	0.13	+1.3
2,480,730	+		LRK53_RS11105	0.13	+2.4
2,480,730	+		LRK53_RS11105	0.13	-0.7
2,480,730	+		LRK53_RS11105	0.13	-0.3
2,480,730	+		LRK53_RS11105	0.13	-0.6
2,480,730	+		LRK53_RS11105	0.13	-1.8
2,480,730	+		LRK53_RS11105	0.13	-0.8
2,480,730	+		LRK53_RS11105	0.13	-0.6
2,480,730	+		LRK53_RS11105	0.13	+0.4
2,480,730	+		LRK53_RS11105	0.13	-1.7
2,480,730	+		LRK53_RS11105	0.13	+0.4
2,480,731	-		LRK53_RS11105	0.13	-1.0
2,480,731	-		LRK53_RS11105	0.13	-0.7
2,480,731	-		LRK53_RS11105	0.13	-1.9
2,480,731	-		LRK53_RS11105	0.13	-0.9
2,480,731	-		LRK53_RS11105	0.13	-0.2
2,480,731	-		LRK53_RS11105	0.13	-2.8
2,480,731	-		LRK53_RS11105	0.13	+0.7
2,480,731	-		LRK53_RS11105	0.13	-2.1
2,480,731	-		LRK53_RS11105	0.13	+2.2
2,480,863	+		LRK53_RS11105	0.41	-1.0
2,480,863	+		LRK53_RS11105	0.41	-0.8
2,480,863	+		LRK53_RS11105	0.41	+0.2
2,480,864	-		LRK53_RS11105	0.41	-1.3
2,480,864	-		LRK53_RS11105	0.41	-0.6
2,480,864	-		LRK53_RS11105	0.41	-0.4
2,480,864	-		LRK53_RS11105	0.41	-1.2
2,480,864	-		LRK53_RS11105	0.41	-0.8
2,481,212	+				-1.3
2,481,212	+				-1.2
2,481,212	+				-2.2
2,481,212	+				-1.7
2,481,212	+				-2.7
2,481,212	+				-0.9
2,481,213	-				+1.2
2,481,213	-				-1.9
2,481,213	-				-0.8
2,481,213	-				-3.5
2,481,213	-				-1.5
2,481,222	+				+0.2
2,481,222	+				+1.1
2,481,222	+				-2.0
2,481,222	+				+0.7
2,481,222	+				+0.2
2,481,223	-				-0.8
2,481,223	-				-0.3
2,481,223	-				-1.0
2,481,223	-				-0.6
2,481,225	+				+1.0
2,481,225	+				-0.6
2,481,225	+				-1.5
2,481,225	+				-0.3
2,481,225	+				-1.9
2,481,225	+				+1.3
2,481,225	+				+1.0
2,481,226	-				-1.3
2,481,226	-				-0.6
2,481,226	-				-0.3
2,481,226	-				+0.4
2,481,226	-				+1.0
2,481,226	-				-0.5
2,481,226	-				-0.2
2,481,226	-				-2.3
2,481,302	+		LRK53_RS11110	0.13	-0.8
2,481,302	+		LRK53_RS11110	0.13	+0.1
2,481,302	+		LRK53_RS11110	0.13	-0.0
2,481,303	-		LRK53_RS11110	0.13	-0.5
2,481,303	-		LRK53_RS11110	0.13	+0.6
2,481,303	-		LRK53_RS11110	0.13	-2.3
2,481,303	-		LRK53_RS11110	0.13	-0.0
2,481,303	-		LRK53_RS11110	0.13	-0.5
2,481,366	+		LRK53_RS11110	0.19	-0.0
2,481,366	+		LRK53_RS11110	0.19	-2.9
2,481,366	+		LRK53_RS11110	0.19	+0.2
2,481,367	-		LRK53_RS11110	0.19	-2.8
2,481,416	+		LRK53_RS11110	0.23	+0.2
2,481,416	+		LRK53_RS11110	0.23	-0.2
2,481,417	-		LRK53_RS11110	0.23	-1.3