Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10340

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,310,627	+		LRK53_RS10330	0.67	-1.5
2,310,627	+		LRK53_RS10330	0.67	-0.9
2,310,627	+		LRK53_RS10330	0.67	+0.4
2,310,627	+		LRK53_RS10330	0.67	-1.0
2,310,627	+		LRK53_RS10330	0.67	+0.3
2,310,627	+		LRK53_RS10330	0.67	-3.1
2,310,627	+		LRK53_RS10330	0.67	-2.2
2,310,627	+		LRK53_RS10330	0.67	-0.3
2,310,627	+		LRK53_RS10330	0.67	-0.9
2,310,627	+		LRK53_RS10330	0.67	+1.0
2,310,627	+		LRK53_RS10330	0.67	-1.7
2,310,628	-		LRK53_RS10330	0.67	-1.4
2,310,628	-		LRK53_RS10330	0.67	+0.6
2,310,628	-		LRK53_RS10330	0.67	-0.9
2,310,628	-		LRK53_RS10330	0.67	-1.8
2,310,628	-		LRK53_RS10330	0.67	-2.5
2,310,628	-		LRK53_RS10330	0.67	+0.2
2,310,628	-		LRK53_RS10330	0.67	-0.1
2,310,628	-		LRK53_RS10330	0.67	-2.2
2,310,628	-		LRK53_RS10330	0.67	+1.3
2,310,628	-		LRK53_RS10330	0.67	-0.1
2,310,628	-		LRK53_RS10330	0.67	-1.5
2,310,628	-		LRK53_RS10330	0.67	-1.0
2,310,628	-		LRK53_RS10330	0.67	-0.7
2,310,628	-		LRK53_RS10330	0.67	-0.8
2,310,631	+		LRK53_RS10330	0.68	-0.6
2,310,631	+		LRK53_RS10330	0.68	+1.0
2,310,631	+		LRK53_RS10330	0.68	-2.7
2,310,631	+		LRK53_RS10330	0.68	-1.7
2,310,631	+		LRK53_RS10330	0.68	+1.1
2,310,632	-		LRK53_RS10330	0.68	+2.3
2,310,632	-		LRK53_RS10330	0.68	-2.0
2,310,632	-		LRK53_RS10330	0.68	+0.7
2,310,632	-		LRK53_RS10330	0.68	+0.2
2,310,632	-		LRK53_RS10330	0.68	-2.1
2,310,632	-		LRK53_RS10330	0.68	-0.3
2,310,671	+		LRK53_RS10330	0.72	-0.5
2,310,671	+		LRK53_RS10330	0.72	-3.7
2,310,671	+		LRK53_RS10330	0.72	+0.3
2,310,672	-		LRK53_RS10330	0.72	+0.5
2,310,672	-		LRK53_RS10330	0.72	-2.4
2,310,672	-		LRK53_RS10330	0.72	-0.5
2,310,755	-		LRK53_RS10330	0.81	-1.4
2,310,799	+		LRK53_RS10330	0.86	+0.5
2,310,799	+		LRK53_RS10330	0.86	-0.9
2,310,799	+		LRK53_RS10330	0.86	-1.8
2,310,799	+		LRK53_RS10330	0.86	+0.1
2,310,799	+		LRK53_RS10330	0.86	-1.5
2,310,799	+		LRK53_RS10330	0.86	-1.3
2,310,799	+		LRK53_RS10330	0.86	-2.6
2,310,799	+		LRK53_RS10330	0.86	+1.1
2,310,800	-		LRK53_RS10330	0.86	-1.5
2,310,800	-		LRK53_RS10330	0.86	-1.4
2,310,800	-		LRK53_RS10330	0.86	-1.5
2,310,800	-		LRK53_RS10330	0.86	-1.2
2,310,800	-		LRK53_RS10330	0.86	-0.3
2,310,800	-		LRK53_RS10330	0.86	-1.5
2,310,800	-		LRK53_RS10330	0.86	+1.4
2,310,800	-		LRK53_RS10330	0.86	+0.5
2,310,800	-		LRK53_RS10330	0.86	+1.6
2,310,800	-		LRK53_RS10330	0.86	-3.2
2,310,814	+		LRK53_RS10330	0.88	-0.4
2,310,814	+		LRK53_RS10330	0.88	-1.5
2,310,814	+		LRK53_RS10330	0.88	-1.9
2,310,814	+		LRK53_RS10330	0.88	+1.5
2,310,814	+		LRK53_RS10330	0.88	-1.5
2,310,814	+		LRK53_RS10330	0.88	-2.1
2,310,814	+		LRK53_RS10330	0.88	-1.1
2,310,815	-		LRK53_RS10330	0.88	-0.8
2,310,815	-		LRK53_RS10330	0.88	-1.7
2,310,815	-		LRK53_RS10330	0.88	-1.8
2,310,815	-		LRK53_RS10330	0.88	-0.8
2,310,815	-		LRK53_RS10330	0.88	-1.3
2,310,816	+		LRK53_RS10330	0.88	-0.1
2,310,816	+		LRK53_RS10330	0.88	-1.2
2,310,816	+		LRK53_RS10330	0.88	-1.8
2,310,817	-		LRK53_RS10330	0.88	+0.2
2,310,817	-		LRK53_RS10330	0.88	+0.8
2,310,817	-		LRK53_RS10330	0.88	-0.1
2,310,856	+				-0.3
2,310,857	-				+1.3
2,310,857	-				-1.8
2,310,921	+				-1.2
2,310,922	-				-0.8
2,310,922	-				-1.2
2,310,947	+				-2.0
2,310,948	-				-0.6
2,310,994	-				-1.5
2,310,994	-				+0.6
2,311,090	+		LRK53_RS10335	0.24	-1.4
2,311,090	+		LRK53_RS10335	0.24	-1.2
2,311,090	+		LRK53_RS10335	0.24	-0.6
2,311,090	+		LRK53_RS10335	0.24	-0.3
2,311,090	+		LRK53_RS10335	0.24	+0.5
2,311,090	+		LRK53_RS10335	0.24	-0.8
2,311,090	+		LRK53_RS10335	0.24	-2.4
2,311,090	+		LRK53_RS10335	0.24	+1.6
2,311,090	+		LRK53_RS10335	0.24	-0.5
2,311,090	+		LRK53_RS10335	0.24	-0.6
2,311,091	-		LRK53_RS10335	0.24	-0.5
2,311,091	-		LRK53_RS10335	0.24	+2.4
2,311,091	-		LRK53_RS10335	0.24	-1.9
2,311,159	+		LRK53_RS10335	0.38	-1.3
2,311,159	+		LRK53_RS10335	0.38	-2.3
2,311,159	+		LRK53_RS10335	0.38	-2.0
2,311,160	-		LRK53_RS10335	0.38	+0.1
2,311,160	-		LRK53_RS10335	0.38	+0.5
2,311,168	+		LRK53_RS10335	0.40	-0.4
2,311,168	+		LRK53_RS10335	0.40	-1.6
2,311,168	+		LRK53_RS10335	0.40	-2.3
2,311,168	+		LRK53_RS10335	0.40	+0.2
2,311,168	+		LRK53_RS10335	0.40	-0.4
2,311,168	+		LRK53_RS10335	0.40	-0.3
2,311,168	+		LRK53_RS10335	0.40	-1.3
2,311,168	+		LRK53_RS10335	0.40	+0.3
2,311,168	+		LRK53_RS10335	0.40	-0.5
2,311,168	+		LRK53_RS10335	0.40	-2.8
2,311,169	-		LRK53_RS10335	0.40	-1.3
2,311,169	-		LRK53_RS10335	0.40	+0.2
2,311,169	-		LRK53_RS10335	0.40	-1.2
2,311,169	-		LRK53_RS10335	0.40	-1.7
2,311,169	-		LRK53_RS10335	0.40	-1.3
2,311,169	-		LRK53_RS10335	0.40	+1.7
2,311,169	-		LRK53_RS10335	0.40	-1.1
2,311,169	-		LRK53_RS10335	0.40	+1.2
2,311,169	-		LRK53_RS10335	0.40	+0.5
2,311,169	-		LRK53_RS10335	0.40	-1.0
2,311,169	-		LRK53_RS10335	0.40	-1.2
2,311,169	-		LRK53_RS10335	0.40	+0.2
2,311,169	-		LRK53_RS10335	0.40	+0.5
2,311,170	+		LRK53_RS10335	0.40	+2.2
2,311,170	+		LRK53_RS10335	0.40	-0.5
2,311,170	+		LRK53_RS10335	0.40	-0.1
2,311,170	+		LRK53_RS10335	0.40	+1.1
2,311,170	+		LRK53_RS10335	0.40	-0.2
2,311,170	+		LRK53_RS10335	0.40	-0.3
2,311,170	+		LRK53_RS10335	0.40	-1.9
2,311,170	+		LRK53_RS10335	0.40	-0.6
2,311,171	-		LRK53_RS10335	0.40	+0.6
2,311,171	-		LRK53_RS10335	0.40	+0.1
2,311,171	-		LRK53_RS10335	0.40	-0.6
2,311,171	-		LRK53_RS10335	0.40	-1.2
2,311,171	-		LRK53_RS10335	0.40	-1.3
2,311,232	+		LRK53_RS10335	0.52	-0.1
2,311,232	+		LRK53_RS10335	0.52	+0.9
2,311,243	+		LRK53_RS10335	0.54	-2.3
2,311,243	+		LRK53_RS10335	0.54	-1.6
2,311,243	+		LRK53_RS10335	0.54	+0.2
2,311,243	+		LRK53_RS10335	0.54	-1.3
2,311,243	+		LRK53_RS10335	0.54	-0.8
2,311,244	-		LRK53_RS10335	0.55	-1.1
2,311,244	-		LRK53_RS10335	0.55	+1.1
2,311,244	-		LRK53_RS10335	0.55	-1.5
2,311,244	-		LRK53_RS10335	0.55	-0.5
2,311,244	-		LRK53_RS10335	0.55	+0.5
2,311,268	-		LRK53_RS10335	0.59	-2.8
2,311,437	+				-1.6
2,311,438	-				-0.8
2,311,605	+		LRK53_RS10340	0.15	-1.5
2,311,707	+		LRK53_RS10340	0.32	-2.4
2,311,707	+		LRK53_RS10340	0.32	+0.1
2,311,707	+		LRK53_RS10340	0.32	-1.6
2,311,780	+		LRK53_RS10340	0.45	-0.2
2,311,780	+		LRK53_RS10340	0.45	+0.9
2,311,820	+		LRK53_RS10340	0.52	-1.1
2,311,820	+		LRK53_RS10340	0.52	-0.9
2,311,820	+		LRK53_RS10340	0.52	-1.7
2,311,821	-		LRK53_RS10340	0.52	-0.5
2,311,821	-		LRK53_RS10340	0.52	-0.5
2,311,821	-		LRK53_RS10340	0.52	-0.5
2,311,821	-		LRK53_RS10340	0.52	-1.5
2,311,826	+		LRK53_RS10340	0.53	+2.2
2,311,826	+		LRK53_RS10340	0.53	-1.3
2,311,826	+		LRK53_RS10340	0.53	-0.7
2,311,827	-		LRK53_RS10340	0.53	-2.1
2,311,827	-		LRK53_RS10340	0.53	-3.2
2,311,827	-		LRK53_RS10340	0.53	-1.0
2,311,827	-		LRK53_RS10340	0.53	+0.7
2,311,827	-		LRK53_RS10340	0.53	+0.3
2,311,827	-		LRK53_RS10340	0.53	+0.5
2,311,970	+		LRK53_RS10340	0.78	-1.5
2,311,971	-		LRK53_RS10340	0.79	-3.0
2,311,971	-		LRK53_RS10340	0.79	+2.4
2,312,022	+		LRK53_RS10340	0.87	-0.3
2,312,022	+		LRK53_RS10340	0.87	-0.5
2,312,022	+		LRK53_RS10340	0.87	+0.7
2,312,022	+		LRK53_RS10340	0.87	-0.8
2,312,056	+				-1.7
2,312,056	+				-1.3
2,312,056	+				+2.9
2,312,056	+				-0.7
2,312,056	+				-1.4
2,312,056	+				-1.5
2,312,056	+				-1.3
2,312,056	+				+0.3
2,312,057	-				-2.0
2,312,057	-				-0.4
2,312,057	-				-0.9
2,312,057	-				-0.6
2,312,057	-				-1.6
2,312,145	-				+0.1
2,312,145	-				-0.1
2,312,145	-				-0.1
2,312,214	+				-1.8
2,312,214	+				-1.8
2,312,214	+				-0.6
2,312,215	-				+0.5
2,312,221	-				+0.3
2,312,250	+				-0.7
2,312,250	+				-0.5
2,312,250	+				-2.1
2,312,250	+				+0.7
2,312,250	+				-1.9
2,312,250	+				-0.8
2,312,250	+				-0.5
2,312,250	+				-0.0
2,312,250	+				-0.3
2,312,251	-				-3.1
2,312,285	+				+1.8
2,312,286	-				-1.5
2,312,286	-				-0.9
2,312,385	+				-1.4
2,312,392	-				-2.1
2,312,470	+				-0.7
2,312,471	-				-0.6
2,312,471	-				-2.1
2,312,471	-				-1.5
2,312,471	-				+0.3
2,312,527	+		LRK53_RS10345	0.12	-1.4
2,312,527	+		LRK53_RS10345	0.12	+0.2
2,312,527	+		LRK53_RS10345	0.12	+1.5
2,312,528	-		LRK53_RS10345	0.12	+1.5
2,312,641	-		LRK53_RS10345	0.16	+0.3
2,312,693	+		LRK53_RS10345	0.19	-0.4
2,312,693	+		LRK53_RS10345	0.19	+0.7
2,312,693	+		LRK53_RS10345	0.19	-0.5
2,312,693	+		LRK53_RS10345	0.19	-0.3
2,312,694	-		LRK53_RS10345	0.19	-0.9
2,312,694	-		LRK53_RS10345	0.19	-2.9
2,312,694	-		LRK53_RS10345	0.19	-2.0
2,312,742	+		LRK53_RS10345	0.21	-1.0
2,312,744	+		LRK53_RS10345	0.21	-1.9
2,312,744	+		LRK53_RS10345	0.21	-0.3
2,312,744	+		LRK53_RS10345	0.21	-0.4
2,312,745	-		LRK53_RS10345	0.21	+0.5
2,312,745	-		LRK53_RS10345	0.21	+1.9
2,312,745	-		LRK53_RS10345	0.21	-0.9
2,312,785	+		LRK53_RS10345	0.22	+0.2
2,312,785	+		LRK53_RS10345	0.22	-0.5
2,312,785	+		LRK53_RS10345	0.22	-1.5
2,312,786	-		LRK53_RS10345	0.23	-0.8
2,313,038	+		LRK53_RS10345	0.33	-0.7
2,313,038	+		LRK53_RS10345	0.33	-1.7
2,313,038	+		LRK53_RS10345	0.33	-0.9
2,313,038	+		LRK53_RS10345	0.33	+0.1
2,313,038	+		LRK53_RS10345	0.33	-1.7
2,313,038	+		LRK53_RS10345	0.33	-1.7
2,313,039	-		LRK53_RS10345	0.33	-2.3
2,313,039	-		LRK53_RS10345	0.33	-0.4
2,313,039	-		LRK53_RS10345	0.33	+0.5
2,313,040	+		LRK53_RS10345	0.33	-1.5
2,313,040	+		LRK53_RS10345	0.33	-1.0
2,313,040	+		LRK53_RS10345	0.33	+0.2
2,313,040	+		LRK53_RS10345	0.33	+0.5
2,313,041	-		LRK53_RS10345	0.33	-0.9
2,313,041	-		LRK53_RS10345	0.33	+0.1
2,313,041	-		LRK53_RS10345	0.33	-3.0
2,313,068	+		LRK53_RS10345	0.34	-0.2
2,313,068	+		LRK53_RS10345	0.34	+0.3
2,313,068	+		LRK53_RS10345	0.34	-0.9
2,313,069	-		LRK53_RS10345	0.35	-0.8
2,313,069	-		LRK53_RS10345	0.35	-0.2