Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09380

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,098,529	+		LRK53_RS09375	0.33	-1.8
2,098,529	+		LRK53_RS09375	0.33	-0.4
2,098,530	-		LRK53_RS09375	0.33	-0.5
2,098,592	+		LRK53_RS09375	0.38	+0.1
2,098,593	-		LRK53_RS09375	0.38	-1.5
2,098,593	-		LRK53_RS09375	0.38	+0.1
2,098,593	-		LRK53_RS09375	0.38	-1.7
2,098,593	-		LRK53_RS09375	0.38	-1.1
2,098,599	+		LRK53_RS09375	0.38	+0.9
2,098,599	+		LRK53_RS09375	0.38	-1.3
2,098,637	+		LRK53_RS09375	0.41	-0.5
2,098,674	+		LRK53_RS09375	0.44	-1.2
2,098,748	+		LRK53_RS09375	0.50	-1.1
2,098,748	+		LRK53_RS09375	0.50	-2.2
2,098,748	+		LRK53_RS09375	0.50	-1.5
2,098,749	-		LRK53_RS09375	0.50	-2.7
2,098,749	-		LRK53_RS09375	0.50	-0.7
2,098,749	-		LRK53_RS09375	0.50	-0.8
2,098,784	+		LRK53_RS09375	0.53	-0.7
2,098,785	-		LRK53_RS09375	0.53	-0.7
2,098,982	+		LRK53_RS09375	0.68	-1.8
2,099,042	+		LRK53_RS09375	0.73	-1.5
2,099,042	+		LRK53_RS09375	0.73	-1.4
2,099,043	-		LRK53_RS09375	0.73	-1.0
2,099,044	-		LRK53_RS09375	0.73	-1.3
2,099,067	-		LRK53_RS09375	0.75	-1.5
2,099,087	+		LRK53_RS09375	0.76	-1.4
2,099,088	-		LRK53_RS09375	0.76	-1.5
2,099,090	-		LRK53_RS09375	0.77	-0.9
2,099,090	-		LRK53_RS09375	0.77	-0.4
2,099,114	+		LRK53_RS09375	0.79	-0.5
2,099,114	+		LRK53_RS09375	0.79	+0.1
2,099,114	+		LRK53_RS09375	0.79	-0.4
2,099,115	-		LRK53_RS09375	0.79	-0.4
2,099,117	-		LRK53_RS09375	0.79	-0.3
2,099,177	+		LRK53_RS09375	0.83	-1.0
2,099,205	+		LRK53_RS09375	0.86	+2.6
2,099,206	-		LRK53_RS09375	0.86	-1.0
2,099,274	+				+0.9
2,099,275	-				-0.9
2,099,275	-				+1.6
2,099,277	+				-1.2
2,099,277	+				-1.4
2,099,277	+				-0.9
2,099,278	-				-0.9
2,099,278	-				-1.2
2,099,282	-				-2.8
2,099,282	-				-0.6
2,099,287	+				-0.8
2,099,430	+				+1.7
2,099,430	+				-1.1
2,099,430	+				-1.2
2,099,430	+				-2.4
2,099,430	+				-0.6
2,099,430	+				+0.4
2,099,430	+				-1.7
2,099,430	+				-1.7
2,099,430	+				-1.1
2,099,430	+				-2.0
2,099,430	+				-1.4
2,099,430	+				-1.3
2,099,430	+				-0.5
2,099,430	+				-1.8
2,099,430	+				-1.3
2,099,431	-				+0.8
2,099,431	-				-1.5
2,099,431	-				-0.3
2,099,431	-				-1.2
2,099,431	-				-2.3
2,099,431	-				-2.3
2,099,431	-				-1.9
2,099,431	-				-0.8
2,099,431	-				+0.3
2,099,438	+				-0.8
2,099,438	+				+0.4
2,099,438	+				-1.5
2,099,438	+				-1.5
2,099,438	+				-1.1
2,099,438	+				-0.1
2,099,438	+				-0.1
2,099,438	+				-0.7
2,099,439	-				-1.3
2,099,439	-				-1.8
2,099,439	-				-0.6
2,099,439	-				+0.8
2,099,439	-				-1.2
2,099,439	-				-1.5
2,099,439	-				-1.4
2,099,439	-				-1.1
2,099,466	+				+0.4
2,099,466	+				-1.4
2,099,466	+				+0.3
2,099,466	+				-0.3
2,099,467	-				-0.5
2,099,467	-				-2.3
2,099,467	-				-0.3
2,099,556	+				-2.3
2,099,557	-				-2.2
2,099,557	-				-0.7
2,099,557	-				-1.3
2,099,903	+		LRK53_RS09380	0.17	-0.1
2,099,903	+		LRK53_RS09380	0.17	-0.8
2,099,903	+		LRK53_RS09380	0.17	-1.9
2,099,903	+		LRK53_RS09380	0.17	-1.4
2,099,903	+		LRK53_RS09380	0.17	+0.3
2,099,903	+		LRK53_RS09380	0.17	-2.0
2,099,903	+		LRK53_RS09380	0.17	+2.1
2,099,903	+		LRK53_RS09380	0.17	-0.8
2,099,903	+		LRK53_RS09380	0.17	-0.1
2,099,904	-		LRK53_RS09380	0.17	+0.1
2,099,904	-		LRK53_RS09380	0.17	-1.7
2,099,904	-		LRK53_RS09380	0.17	+0.1
2,099,904	-		LRK53_RS09380	0.17	+0.1
2,099,904	-		LRK53_RS09380	0.17	-1.5
2,099,904	-		LRK53_RS09380	0.17	-0.7
2,099,904	-		LRK53_RS09380	0.17	-1.0
2,099,904	-		LRK53_RS09380	0.17	-0.1
2,099,904	-		LRK53_RS09380	0.17	-1.6
2,099,918	+		LRK53_RS09380	0.17	-1.0
2,099,918	+		LRK53_RS09380	0.17	-1.0
2,099,919	-		LRK53_RS09380	0.17	-1.0
2,099,919	-		LRK53_RS09380	0.17	+2.1
2,099,919	-		LRK53_RS09380	0.17	-0.6
2,099,921	+		LRK53_RS09380	0.17	-3.3
2,099,921	+		LRK53_RS09380	0.17	-2.0
2,099,921	+		LRK53_RS09380	0.17	-0.7
2,099,921	+		LRK53_RS09380	0.17	-0.5
2,099,922	-		LRK53_RS09380	0.17	+0.1
2,099,922	-		LRK53_RS09380	0.17	-0.1
2,100,002	+		LRK53_RS09380	0.21	-1.5
2,100,003	-		LRK53_RS09380	0.21	-1.1
2,100,003	-		LRK53_RS09380	0.21	-0.5
2,100,003	-		LRK53_RS09380	0.21	-2.3
2,100,003	-		LRK53_RS09380	0.21	-0.1
2,100,003	-		LRK53_RS09380	0.21	+2.5
2,100,119	+		LRK53_RS09380	0.26	-1.5
2,100,119	+		LRK53_RS09380	0.26	-0.5
2,100,119	+		LRK53_RS09380	0.26	-2.2
2,100,119	+		LRK53_RS09380	0.26	-0.1
2,100,119	+		LRK53_RS09380	0.26	-2.0
2,100,120	-		LRK53_RS09380	0.26	+1.5
2,100,120	-		LRK53_RS09380	0.26	-0.1
2,100,188	+		LRK53_RS09380	0.29	-1.0
2,100,188	+		LRK53_RS09380	0.29	-0.1
2,100,188	+		LRK53_RS09380	0.29	-0.1
2,100,188	+		LRK53_RS09380	0.29	+0.5
2,100,189	-		LRK53_RS09380	0.29	+0.1
2,100,189	-		LRK53_RS09380	0.29	-0.7
2,100,218	+		LRK53_RS09380	0.30	-2.2
2,100,218	+		LRK53_RS09380	0.30	+0.1
2,100,218	+		LRK53_RS09380	0.30	-1.2
2,100,218	+		LRK53_RS09380	0.30	-1.5
2,100,218	+		LRK53_RS09380	0.30	-1.2
2,100,219	-		LRK53_RS09380	0.30	-1.1
2,100,219	-		LRK53_RS09380	0.30	-0.8
2,100,219	-		LRK53_RS09380	0.30	-0.8
2,100,219	-		LRK53_RS09380	0.30	+0.7
2,100,219	-		LRK53_RS09380	0.30	+1.4
2,100,302	+		LRK53_RS09380	0.34	+0.2
2,100,302	+		LRK53_RS09380	0.34	-1.4
2,100,303	-		LRK53_RS09380	0.34	-0.1
2,100,389	+		LRK53_RS09380	0.38	-0.9
2,100,389	+		LRK53_RS09380	0.38	+0.2
2,100,389	+		LRK53_RS09380	0.38	-2.4
2,100,389	+		LRK53_RS09380	0.38	-2.8
2,100,389	+		LRK53_RS09380	0.38	-2.3
2,100,389	+		LRK53_RS09380	0.38	-1.8
2,100,389	+		LRK53_RS09380	0.38	-0.9
2,100,389	+		LRK53_RS09380	0.38	-1.1
2,100,389	+		LRK53_RS09380	0.38	-3.3
2,100,390	-		LRK53_RS09380	0.38	+0.7
2,100,390	-		LRK53_RS09380	0.38	-0.7
2,100,390	-		LRK53_RS09380	0.38	+1.3
2,100,390	-		LRK53_RS09380	0.38	+1.1
2,100,390	-		LRK53_RS09380	0.38	-0.5
2,100,390	-		LRK53_RS09380	0.38	-1.2
2,100,390	-		LRK53_RS09380	0.38	+0.9
2,100,390	-		LRK53_RS09380	0.38	-1.3
2,100,390	-		LRK53_RS09380	0.38	-2.7
2,100,390	-		LRK53_RS09380	0.38	-0.8
2,100,390	-		LRK53_RS09380	0.38	+1.1
2,100,390	-		LRK53_RS09380	0.38	+0.1
2,100,413	+		LRK53_RS09380	0.39	-1.5
2,100,413	+		LRK53_RS09380	0.39	-0.1
2,100,413	+		LRK53_RS09380	0.39	-0.3
2,100,414	-		LRK53_RS09380	0.39	-0.5
2,100,414	-		LRK53_RS09380	0.39	-1.1
2,100,414	-		LRK53_RS09380	0.39	+0.1
2,100,414	-		LRK53_RS09380	0.39	-1.7
2,100,560	+		LRK53_RS09380	0.45	-2.5
2,100,560	+		LRK53_RS09380	0.45	+0.0
2,100,561	-		LRK53_RS09380	0.45	-1.1
2,100,561	-		LRK53_RS09380	0.45	-0.7
2,100,651	-		LRK53_RS09380	0.49	+0.6
2,100,651	-		LRK53_RS09380	0.49	-0.5
2,100,651	-		LRK53_RS09380	0.49	-0.3
2,100,680	+		LRK53_RS09380	0.51	-1.5
2,100,680	+		LRK53_RS09380	0.51	-1.5
2,100,681	-		LRK53_RS09380	0.51	-2.3
2,100,681	-		LRK53_RS09380	0.51	-0.1
2,100,681	-		LRK53_RS09380	0.51	-1.3
2,100,681	-		LRK53_RS09380	0.51	-1.0
2,100,681	-		LRK53_RS09380	0.51	-0.7
2,100,681	-		LRK53_RS09380	0.51	-1.4
2,100,689	+		LRK53_RS09380	0.51	-0.8
2,100,689	+		LRK53_RS09380	0.51	-2.6
2,100,689	+		LRK53_RS09380	0.51	-2.2
2,100,689	+		LRK53_RS09380	0.51	-2.7
2,100,689	+		LRK53_RS09380	0.51	-2.4
2,100,689	+		LRK53_RS09380	0.51	-0.9
2,100,690	-		LRK53_RS09380	0.51	-1.2
2,100,690	-		LRK53_RS09380	0.51	-1.7
2,100,728	+		LRK53_RS09380	0.53	-1.7
2,100,728	+		LRK53_RS09380	0.53	-0.0
2,100,728	+		LRK53_RS09380	0.53	-0.7
2,100,728	+		LRK53_RS09380	0.53	-0.5
2,100,809	+		LRK53_RS09380	0.56	-2.6
2,100,809	+		LRK53_RS09380	0.56	-0.9
2,100,810	-		LRK53_RS09380	0.56	+2.2
2,100,810	-		LRK53_RS09380	0.56	-1.8
2,100,810	-		LRK53_RS09380	0.56	+0.9
2,100,876	-		LRK53_RS09380	0.59	-1.1
2,100,876	-		LRK53_RS09380	0.59	-0.3
2,101,037	+		LRK53_RS09380	0.66	-1.0
2,101,037	+		LRK53_RS09380	0.66	-0.8
2,101,037	+		LRK53_RS09380	0.66	-1.0
2,101,037	+		LRK53_RS09380	0.66	+0.3
2,101,037	+		LRK53_RS09380	0.66	-2.5
2,101,037	+		LRK53_RS09380	0.66	-0.3
2,101,037	+		LRK53_RS09380	0.66	-1.4
2,101,037	+		LRK53_RS09380	0.66	-1.4
2,101,038	-		LRK53_RS09380	0.66	-0.3
2,101,038	-		LRK53_RS09380	0.66	-0.9
2,101,038	-		LRK53_RS09380	0.66	-0.6
2,101,038	-		LRK53_RS09380	0.66	-0.6
2,101,118	+		LRK53_RS09380	0.70	-1.1
2,101,118	+		LRK53_RS09380	0.70	-1.1
2,101,118	+		LRK53_RS09380	0.70	-1.1
2,101,119	-		LRK53_RS09380	0.70	-1.0
2,101,119	-		LRK53_RS09380	0.70	-1.7
2,101,119	-		LRK53_RS09380	0.70	-1.1
2,101,130	+		LRK53_RS09380	0.70	-0.6
2,101,131	-		LRK53_RS09380	0.70	+0.5
2,101,131	-		LRK53_RS09380	0.70	+2.1
2,101,131	-		LRK53_RS09380	0.70	-0.5
2,101,142	+		LRK53_RS09380	0.71	-1.5
2,101,143	-		LRK53_RS09380	0.71	-3.5
2,101,214	+		LRK53_RS09380	0.74	-2.9
2,101,214	+		LRK53_RS09380	0.74	-0.9
2,101,214	+		LRK53_RS09380	0.74	+0.1
2,101,214	+		LRK53_RS09380	0.74	-2.0
2,101,214	+		LRK53_RS09380	0.74	-2.3
2,101,214	+		LRK53_RS09380	0.74	-0.9
2,101,215	-		LRK53_RS09380	0.74	-1.9
2,101,215	-		LRK53_RS09380	0.74	-0.9
2,101,215	-		LRK53_RS09380	0.74	-0.3
2,101,215	-		LRK53_RS09380	0.74	-0.6
2,101,215	-		LRK53_RS09380	0.74	+0.2
2,101,215	-		LRK53_RS09380	0.74	+0.0
2,101,215	-		LRK53_RS09380	0.74	-1.2
2,101,215	-		LRK53_RS09380	0.74	+1.4
2,101,379	+		LRK53_RS09380	0.81	-0.5
2,101,380	-		LRK53_RS09380	0.81	-0.5
2,101,380	-		LRK53_RS09380	0.81	+0.5
2,101,394	+		LRK53_RS09380	0.82	+0.1
2,101,439	+		LRK53_RS09380	0.84	+0.1
2,101,439	+		LRK53_RS09380	0.84	-1.2
2,101,439	+		LRK53_RS09380	0.84	+0.4
2,101,439	+		LRK53_RS09380	0.84	-2.4
2,101,439	+		LRK53_RS09380	0.84	-0.6
2,101,440	-		LRK53_RS09380	0.84	-1.0
2,101,440	-		LRK53_RS09380	0.84	+0.0
2,101,592	+				-2.1
2,101,592	+				+1.0
2,101,592	+				-1.3
2,101,593	-				+0.5
2,101,593	-				+1.6
2,101,593	-				-0.1
2,101,616	+				-2.3
2,101,643	+				-1.7
2,101,644	-				+0.3
2,101,644	-				-1.3
2,101,644	-				-1.3
2,101,644	-				+0.1
2,101,706	+				-0.1
2,101,706	+				-1.2
2,101,706	+				-0.3
2,101,706	+				-0.9
2,101,706	+				-0.5
2,101,706	+				-0.2
2,101,707	-				-1.6
2,101,707	-				-0.7
2,101,707	-				-0.7
2,101,707	-				-0.6
2,101,757	+				-1.7
2,101,758	-				-1.0
2,101,758	-				+0.3
2,101,761	-				-1.4
2,101,761	-				-0.7
2,101,761	-				-0.1
2,101,761	-				+1.7
2,101,761	-				-0.5
2,101,765	+				-2.3
2,101,765	+				-0.2
2,101,765	+				-2.8
2,101,765	+				+0.5
2,101,765	+				-1.5
2,101,766	-				+1.6
2,101,782	-				+0.5
2,101,797	-				-0.6
2,101,797	-				-0.6
2,101,797	-				-0.7
2,101,850	+				+0.3
2,101,850	+				-2.2
2,101,850	+				-0.8
2,101,851	-				+0.4
2,102,026	+		LRK53_RS09385	0.14	+0.1
2,102,026	+		LRK53_RS09385	0.14	+1.4
2,102,026	+		LRK53_RS09385	0.14	-0.5
2,102,026	+		LRK53_RS09385	0.14	-2.3
2,102,026	+		LRK53_RS09385	0.14	-1.3
2,102,026	+		LRK53_RS09385	0.14	-2.1
2,102,026	+		LRK53_RS09385	0.14	-0.1
2,102,026	+		LRK53_RS09385	0.14	-2.4
2,102,026	+		LRK53_RS09385	0.14	-0.6
2,102,026	+		LRK53_RS09385	0.14	-1.8
2,102,026	+		LRK53_RS09385	0.14	-1.1
2,102,027	-		LRK53_RS09385	0.14	-0.6
2,102,027	-		LRK53_RS09385	0.14	-0.4
2,102,027	-		LRK53_RS09385	0.14	-0.6
2,102,027	-		LRK53_RS09385	0.14	+2.4
2,102,027	-		LRK53_RS09385	0.14	+0.7
2,102,027	-		LRK53_RS09385	0.14	-1.6
2,102,027	-		LRK53_RS09385	0.14	+2.1
2,102,027	-		LRK53_RS09385	0.14	+0.3
2,102,053	+		LRK53_RS09385	0.17	-1.4
2,102,054	-		LRK53_RS09385	0.17	-0.6
2,102,251	+		LRK53_RS09385	0.36	-1.4
2,102,251	+		LRK53_RS09385	0.36	-1.7
2,102,251	+		LRK53_RS09385	0.36	-1.9
2,102,251	+		LRK53_RS09385	0.36	-2.7
2,102,251	+		LRK53_RS09385	0.36	-0.7
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2,102,317	+		LRK53_RS09385	0.42	-0.3
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2,102,446	+		LRK53_RS09385	0.54	-0.5
2,102,446	+		LRK53_RS09385	0.54	-2.0
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2,102,606	-		LRK53_RS09385	0.70	-1.8
2,102,606	-		LRK53_RS09385	0.70	-2.0
2,102,611	+		LRK53_RS09385	0.70	+1.1
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2,102,611	+		LRK53_RS09385	0.70	-1.7
2,102,612	-		LRK53_RS09385	0.71	-3.0
2,102,612	-		LRK53_RS09385	0.71	-0.9
2,102,743	+		LRK53_RS09385	0.83	+0.9
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2,102,759	+		LRK53_RS09385	0.85	+0.1
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2,102,759	+		LRK53_RS09385	0.85	-0.3
2,102,759	+		LRK53_RS09385	0.85	-0.7
2,102,759	+		LRK53_RS09385	0.85	-0.9
2,102,759	+		LRK53_RS09385	0.85	-2.0
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2,102,759	+		LRK53_RS09385	0.85	-0.1
2,102,759	+		LRK53_RS09385	0.85	-2.3
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2,102,759	+		LRK53_RS09385	0.85	-0.3
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2,102,762	-		LRK53_RS09385	0.85	-1.1
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