Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08655

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,943,231	+		LRK53_RS08650	0.33	+0.0
1,943,231	+		LRK53_RS08650	0.33	+2.5
1,943,232	-		LRK53_RS08650	0.33	+0.5
1,943,330	+		LRK53_RS08650	0.40	-0.9
1,943,378	+		LRK53_RS08650	0.44	-0.3
1,943,378	+		LRK53_RS08650	0.44	-0.5
1,943,590	+		LRK53_RS08650	0.58	-1.6
1,943,590	+		LRK53_RS08650	0.58	-1.3
1,943,590	+		LRK53_RS08650	0.58	-1.7
1,943,590	+		LRK53_RS08650	0.58	-2.7
1,943,590	+		LRK53_RS08650	0.58	+0.7
1,943,591	-		LRK53_RS08650	0.58	-0.5
1,943,591	-		LRK53_RS08650	0.58	-0.6
1,943,591	-		LRK53_RS08650	0.58	-2.9
1,943,591	-		LRK53_RS08650	0.58	-2.2
1,943,591	-		LRK53_RS08650	0.58	-1.5
1,943,591	-		LRK53_RS08650	0.58	-0.3
1,943,591	-		LRK53_RS08650	0.58	+0.0
1,943,747	+		LRK53_RS08650	0.69	-0.3
1,943,747	+		LRK53_RS08650	0.69	-2.8
1,943,747	+		LRK53_RS08650	0.69	-0.7
1,943,748	-		LRK53_RS08650	0.69	-0.5
1,943,756	+		LRK53_RS08650	0.70	-0.8
1,943,756	+		LRK53_RS08650	0.70	-0.2
1,943,756	+		LRK53_RS08650	0.70	-0.0
1,943,756	+		LRK53_RS08650	0.70	-1.9
1,943,757	-		LRK53_RS08650	0.70	-0.2
1,943,757	-		LRK53_RS08650	0.70	+0.3
1,943,780	+		LRK53_RS08650	0.71	-1.7
1,943,813	+		LRK53_RS08650	0.74	+0.1
1,943,832	+		LRK53_RS08650	0.75	+1.1
1,943,832	+		LRK53_RS08650	0.75	-2.1
1,943,833	-		LRK53_RS08650	0.75	+0.1
1,943,909	+		LRK53_RS08650	0.80	-0.3
1,943,909	+		LRK53_RS08650	0.80	-1.3
1,943,909	+		LRK53_RS08650	0.80	-1.7
1,943,909	+		LRK53_RS08650	0.80	-0.2
1,943,909	+		LRK53_RS08650	0.80	-0.3
1,943,909	+		LRK53_RS08650	0.80	-0.4
1,943,910	-		LRK53_RS08650	0.80	-1.3
1,943,959	+		LRK53_RS08650	0.84	-1.9
1,943,992	+		LRK53_RS08650	0.86	-4.7
1,943,992	+		LRK53_RS08650	0.86	-1.7
1,943,992	+		LRK53_RS08650	0.86	+0.8
1,943,992	+		LRK53_RS08650	0.86	-1.3
1,943,992	+		LRK53_RS08650	0.86	+0.3
1,943,992	+		LRK53_RS08650	0.86	-2.3
1,943,992	+		LRK53_RS08650	0.86	+2.4
1,943,993	-		LRK53_RS08650	0.86	+0.5
1,944,053	+				+0.5
1,944,053	+				-0.4
1,944,054	-				-0.3
1,944,192	+				-0.7
1,944,192	+				-2.9
1,944,192	+				-0.5
1,944,192	+				+0.5
1,944,192	+				-1.7
1,944,192	+				-2.0
1,944,192	+				-0.4
1,944,192	+				-0.7
1,944,193	-				-2.0
1,944,193	-				-0.5
1,944,193	-				-0.2
1,944,193	-				-0.8
1,944,193	-				-0.2
1,944,193	-				-1.6
1,944,193	-				-2.0
1,944,193	-				-2.2
1,944,193	-				-1.0
1,944,193	-				-0.8
1,944,193	-				+0.0
1,944,193	-				+0.5
1,944,193	-				-0.2
1,944,314	-				-0.3
1,944,314	-				+0.0
1,944,334	+				+0.3
1,944,334	+				+1.1
1,944,334	+				-0.2
1,944,334	+				-0.7
1,944,335	-				-1.5
1,944,562	+		LRK53_RS08655	0.21	-2.4
1,944,562	+		LRK53_RS08655	0.21	-0.2
1,944,562	+		LRK53_RS08655	0.21	-1.0
1,944,562	+		LRK53_RS08655	0.21	-1.4
1,944,562	+		LRK53_RS08655	0.21	-0.7
1,944,562	+		LRK53_RS08655	0.21	+0.2
1,944,562	+		LRK53_RS08655	0.21	+0.2
1,944,562	+		LRK53_RS08655	0.21	-1.4
1,944,562	+		LRK53_RS08655	0.21	+0.7
1,944,562	+		LRK53_RS08655	0.21	-0.9
1,944,562	+		LRK53_RS08655	0.21	+0.3
1,944,562	+		LRK53_RS08655	0.21	-1.0
1,944,563	-		LRK53_RS08655	0.21	+1.8
1,944,811	+		LRK53_RS08655	0.34	-1.4
1,944,811	+		LRK53_RS08655	0.34	-1.6
1,944,811	+		LRK53_RS08655	0.34	-1.2
1,944,811	+		LRK53_RS08655	0.34	-0.5
1,944,811	+		LRK53_RS08655	0.34	-2.4
1,944,811	+		LRK53_RS08655	0.34	-2.4
1,944,812	-		LRK53_RS08655	0.34	+1.0
1,944,812	-		LRK53_RS08655	0.34	-2.0
1,944,812	-		LRK53_RS08655	0.34	-0.2
1,944,892	+		LRK53_RS08655	0.39	-0.3
1,944,892	+		LRK53_RS08655	0.39	-0.9
1,944,893	-		LRK53_RS08655	0.39	-2.5
1,944,893	-		LRK53_RS08655	0.39	+0.5
1,944,973	+		LRK53_RS08655	0.43	-2.6
1,944,973	+		LRK53_RS08655	0.43	-1.2
1,944,973	+		LRK53_RS08655	0.43	+0.0
1,944,973	+		LRK53_RS08655	0.43	-3.5
1,944,973	+		LRK53_RS08655	0.43	+1.0
1,944,973	+		LRK53_RS08655	0.43	-2.0
1,944,974	-		LRK53_RS08655	0.43	-2.6
1,944,974	-		LRK53_RS08655	0.43	-0.1
1,944,974	-		LRK53_RS08655	0.43	+2.3
1,944,974	-		LRK53_RS08655	0.43	-1.7
1,944,974	-		LRK53_RS08655	0.43	-0.2
1,944,974	-		LRK53_RS08655	0.43	+1.5
1,945,000	+		LRK53_RS08655	0.45	+0.0
1,945,000	+		LRK53_RS08655	0.45	-0.9
1,945,000	+		LRK53_RS08655	0.45	-2.3
1,945,000	+		LRK53_RS08655	0.45	-2.1
1,945,000	+		LRK53_RS08655	0.45	-0.9
1,945,000	+		LRK53_RS08655	0.45	-0.5
1,945,001	-		LRK53_RS08655	0.45	+1.1
1,945,001	-		LRK53_RS08655	0.45	-0.6
1,945,087	+		LRK53_RS08655	0.50	-2.2
1,945,088	-		LRK53_RS08655	0.50	+1.7
1,945,088	-		LRK53_RS08655	0.50	-0.6
1,945,093	+		LRK53_RS08655	0.50	-2.4
1,945,093	+		LRK53_RS08655	0.50	+0.3
1,945,093	+		LRK53_RS08655	0.50	-3.2
1,945,093	+		LRK53_RS08655	0.50	+0.0
1,945,093	+		LRK53_RS08655	0.50	-0.3
1,945,093	+		LRK53_RS08655	0.50	-1.4
1,945,093	+		LRK53_RS08655	0.50	-0.9
1,945,093	+		LRK53_RS08655	0.50	-2.4
1,945,093	+		LRK53_RS08655	0.50	+0.3
1,945,093	+		LRK53_RS08655	0.50	-1.2
1,945,093	+		LRK53_RS08655	0.50	-4.5
1,945,094	-		LRK53_RS08655	0.50	-1.2
1,945,094	-		LRK53_RS08655	0.50	+0.7
1,945,094	-		LRK53_RS08655	0.50	-1.6
1,945,094	-		LRK53_RS08655	0.50	+2.4
1,945,094	-		LRK53_RS08655	0.50	+0.8
1,945,210	+		LRK53_RS08655	0.56	+0.1
1,945,210	+		LRK53_RS08655	0.56	-1.0
1,945,210	+		LRK53_RS08655	0.56	-0.2
1,945,210	+		LRK53_RS08655	0.56	+0.5
1,945,210	+		LRK53_RS08655	0.56	-0.9
1,945,210	+		LRK53_RS08655	0.56	-2.0
1,945,210	+		LRK53_RS08655	0.56	-0.8
1,945,210	+		LRK53_RS08655	0.56	-0.6
1,945,211	-		LRK53_RS08655	0.56	+0.0
1,945,211	-		LRK53_RS08655	0.56	+1.3
1,945,217	-		LRK53_RS08655	0.57	-1.5
1,945,401	+		LRK53_RS08655	0.67	-0.8
1,945,401	+		LRK53_RS08655	0.67	-0.0
1,945,402	-		LRK53_RS08655	0.67	-2.6
1,945,402	-		LRK53_RS08655	0.67	-2.4
1,945,507	+		LRK53_RS08655	0.73	-3.8
1,945,507	+		LRK53_RS08655	0.73	-0.1
1,945,507	+		LRK53_RS08655	0.73	-1.6
1,945,507	+		LRK53_RS08655	0.73	-1.9
1,945,507	+		LRK53_RS08655	0.73	-3.9
1,945,507	+		LRK53_RS08655	0.73	-0.6
1,945,507	+		LRK53_RS08655	0.73	-1.4
1,945,507	+		LRK53_RS08655	0.73	-0.3
1,945,508	-		LRK53_RS08655	0.73	-0.2
1,945,508	-		LRK53_RS08655	0.73	-2.7
1,945,508	-		LRK53_RS08655	0.73	+2.8
1,945,508	-		LRK53_RS08655	0.73	-0.5
1,945,508	-		LRK53_RS08655	0.73	-1.9
1,945,508	-		LRK53_RS08655	0.73	+0.2
1,945,508	-		LRK53_RS08655	0.73	+0.8
1,945,508	-		LRK53_RS08655	0.73	-2.3
1,945,567	+		LRK53_RS08655	0.76	+0.1
1,945,567	+		LRK53_RS08655	0.76	-1.6
1,945,567	+		LRK53_RS08655	0.76	-1.5
1,945,567	+		LRK53_RS08655	0.76	-1.3
1,945,568	-		LRK53_RS08655	0.76	-0.3
1,945,568	-		LRK53_RS08655	0.76	-0.2
1,945,642	+		LRK53_RS08655	0.80	-1.0
1,945,642	+		LRK53_RS08655	0.80	-1.0
1,945,642	+		LRK53_RS08655	0.80	+0.7
1,945,642	+		LRK53_RS08655	0.80	+0.3
1,945,642	+		LRK53_RS08655	0.80	-0.5
1,945,642	+		LRK53_RS08655	0.80	-1.6
1,945,642	+		LRK53_RS08655	0.80	-0.5
1,945,642	+		LRK53_RS08655	0.80	-0.2
1,945,642	+		LRK53_RS08655	0.80	+1.3
1,945,642	+		LRK53_RS08655	0.80	+0.8
1,945,643	-		LRK53_RS08655	0.80	-0.7
1,945,643	-		LRK53_RS08655	0.80	-1.9
1,945,643	-		LRK53_RS08655	0.80	-0.1
1,945,643	-		LRK53_RS08655	0.80	-1.1
1,945,643	-		LRK53_RS08655	0.80	-0.5
1,945,643	-		LRK53_RS08655	0.80	-0.4
1,945,643	-		LRK53_RS08655	0.80	-0.3
1,945,643	-		LRK53_RS08655	0.80	-0.2
1,945,643	-		LRK53_RS08655	0.80	-0.7
1,945,643	-		LRK53_RS08655	0.80	-1.7
1,945,906	+				-0.2
1,945,906	+				-1.2
1,945,906	+				+0.6
1,945,906	+				-0.4
1,946,012	+				-1.5
1,946,013	-				-0.8
1,946,013	-				-1.7
1,946,014	+				-1.6
1,946,019	+				-0.5
1,946,020	-				+0.0
1,946,020	-				-0.1
1,946,020	-				+0.8
1,946,023	-				-0.2
1,946,023	-				-1.7
1,946,048	+				-1.8
1,946,077	+				-2.3
1,946,077	+				-1.0
1,946,077	+				-1.1
1,946,078	-				+0.3
1,946,078	-				+1.5
1,946,078	-				-0.8
1,946,078	-				-1.2
1,946,098	+				-1.3
1,946,098	+				-1.2
1,946,098	+				-0.9
1,946,099	-				-1.9
1,946,099	-				-1.8
1,946,099	-				+0.0
1,946,176	+				-2.2
1,946,176	+				-0.7
1,946,176	+				-1.3
1,946,177	-				-1.5
1,946,177	-				-3.5
1,946,177	-				-0.9
1,946,177	-				-1.0
1,946,197	+		LRK53_RS08660	0.14	-1.1
1,946,198	-		LRK53_RS08660	0.14	-0.9
1,946,198	-		LRK53_RS08660	0.14	+0.0
1,946,198	-		LRK53_RS08660	0.14	-2.3
1,946,198	-		LRK53_RS08660	0.14	-0.3
1,946,390	+		LRK53_RS08660	0.56	+0.0
1,946,391	-		LRK53_RS08660	0.56	-1.9
1,946,391	-		LRK53_RS08660	0.56	-1.0
1,946,391	-		LRK53_RS08660	0.56	-3.4
1,946,391	-		LRK53_RS08660	0.56	-1.0
1,946,391	-		LRK53_RS08660	0.56	+0.0
1,946,425	+		LRK53_RS08660	0.63	-1.9
1,946,425	+		LRK53_RS08660	0.63	-0.4
1,946,425	+		LRK53_RS08660	0.63	-1.5
1,946,425	+		LRK53_RS08660	0.63	+0.7
1,946,425	+		LRK53_RS08660	0.63	-1.2
1,946,426	-		LRK53_RS08660	0.63	+0.7
1,946,552	+				-0.5
1,946,552	+				-1.1
1,946,552	+				-0.1
1,946,552	+				-1.6
1,946,552	+				-0.5
1,946,552	+				-1.1
1,946,552	+				+0.1
1,946,552	+				-0.6
1,946,552	+				-0.2
1,946,552	+				+1.2
1,946,552	+				+1.3
1,946,552	+				+0.8
1,946,553	-				+0.0
1,946,553	-				+0.3
1,946,553	-				+1.7
1,946,553	-				-2.3
1,946,553	-				-1.7
1,946,553	-				-0.8
1,946,553	-				-1.2
1,946,553	-				-0.7
1,946,575	+				-0.6
1,946,575	+				-2.1
1,946,576	-				+2.0
1,946,576	-				-1.2
1,946,576	-				-1.2
1,946,650	+		LRK53_RS08665	0.29	+1.0
1,946,752	+		LRK53_RS08665	0.79	-0.9
1,946,752	+		LRK53_RS08665	0.79	-1.2
1,946,752	+		LRK53_RS08665	0.79	-2.2
1,946,753	-		LRK53_RS08665	0.79	-1.3
1,946,753	-		LRK53_RS08665	0.79	-0.5
1,946,794	+				-0.7
1,946,794	+				-0.5
1,946,794	+				-1.8
1,946,795	-				-1.1
1,946,795	-				+0.3
1,946,795	-				-2.2
1,946,795	-				-1.6
1,946,809	+				-0.7
1,946,928	+				-1.7
1,946,928	+				-1.3
1,946,929	-				+1.1
1,946,929	-				-0.3
1,946,929	-				-1.8
1,946,929	-				-1.6