Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08260

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,856,433	+		LRK53_RS08250	0.89	-1.6
1,856,433	+		LRK53_RS08250	0.89	-0.8
1,856,433	+		LRK53_RS08250	0.89	-0.7
1,856,433	+		LRK53_RS08250	0.89	-2.3
1,856,434	-		LRK53_RS08250	0.89	-1.1
1,856,458	+				-0.6
1,856,458	+				-1.1
1,856,458	+				-1.7
1,856,458	+				-0.9
1,856,458	+				-0.1
1,856,459	-				-1.6
1,856,459	-				-0.8
1,856,459	-				+1.0
1,856,459	-				-3.6
1,856,459	-				+0.3
1,856,459	-				-0.9
1,856,459	-				+0.8
1,856,548	+		LRK53_RS08255	0.11	+1.8
1,856,549	-		LRK53_RS08255	0.11	-2.0
1,856,549	-		LRK53_RS08255	0.11	-0.6
1,856,549	-		LRK53_RS08255	0.11	-0.1
1,856,590	+		LRK53_RS08255	0.17	+0.6
1,856,590	+		LRK53_RS08255	0.17	-1.6
1,856,591	-		LRK53_RS08255	0.17	-1.9
1,856,591	-		LRK53_RS08255	0.17	-0.3
1,856,591	-		LRK53_RS08255	0.17	-2.6
1,856,731	+		LRK53_RS08255	0.38	-0.3
1,856,732	-		LRK53_RS08255	0.38	+1.8
1,856,734	+		LRK53_RS08255	0.39	+0.5
1,856,734	+		LRK53_RS08255	0.39	-0.5
1,856,734	+		LRK53_RS08255	0.39	+0.3
1,856,734	+		LRK53_RS08255	0.39	-1.4
1,856,734	+		LRK53_RS08255	0.39	+0.0
1,856,734	+		LRK53_RS08255	0.39	-1.3
1,856,734	+		LRK53_RS08255	0.39	-0.7
1,856,735	-		LRK53_RS08255	0.39	-1.8
1,856,735	-		LRK53_RS08255	0.39	-0.5
1,856,735	-		LRK53_RS08255	0.39	-2.5
1,856,735	-		LRK53_RS08255	0.39	-1.5
1,856,735	-		LRK53_RS08255	0.39	-1.8
1,856,735	-		LRK53_RS08255	0.39	-0.3
1,856,735	-		LRK53_RS08255	0.39	-1.7
1,856,923	+		LRK53_RS08255	0.67	-0.4
1,856,923	+		LRK53_RS08255	0.67	-0.5
1,856,924	-		LRK53_RS08255	0.67	-2.6
1,856,924	-		LRK53_RS08255	0.67	-0.3
1,856,924	-		LRK53_RS08255	0.67	-1.8
1,856,924	-		LRK53_RS08255	0.67	-1.2
1,856,980	+		LRK53_RS08255	0.75	-0.5
1,856,980	+		LRK53_RS08255	0.75	-0.2
1,857,092	-				+0.7
1,857,176	+				-0.7
1,857,177	-				-0.2
1,857,177	-				-0.9
1,857,207	+				-0.9
1,857,208	-				-1.5
1,857,208	-				-2.3
1,857,208	-				-1.3
1,857,208	-				-1.9
1,857,208	-				-1.2
1,857,209	+				+0.3
1,857,209	+				-0.6
1,857,209	+				-1.5
1,857,210	-				-2.7
1,857,210	-				+0.5
1,857,221	-				-1.6
1,857,346	+				+1.4
1,857,364	+				-2.2
1,857,520	+		LRK53_RS08260	0.20	-0.2
1,857,521	-		LRK53_RS08260	0.20	-1.0
1,857,521	-		LRK53_RS08260	0.20	-0.8
1,857,521	-		LRK53_RS08260	0.20	-3.1
1,857,521	-		LRK53_RS08260	0.20	-0.6
1,857,556	+		LRK53_RS08260	0.23	-0.9
1,857,556	+		LRK53_RS08260	0.23	-1.1
1,857,556	+		LRK53_RS08260	0.23	-1.8
1,857,556	+		LRK53_RS08260	0.23	-2.1
1,857,556	+		LRK53_RS08260	0.23	-2.5
1,857,556	+		LRK53_RS08260	0.23	-2.5
1,857,557	-		LRK53_RS08260	0.23	-2.0
1,857,557	-		LRK53_RS08260	0.23	-0.2
1,857,557	-		LRK53_RS08260	0.23	+2.3
1,857,557	-		LRK53_RS08260	0.23	-2.1
1,857,658	+		LRK53_RS08260	0.31	-2.3
1,857,658	+		LRK53_RS08260	0.31	+0.7
1,857,658	+		LRK53_RS08260	0.31	-0.5
1,857,659	-		LRK53_RS08260	0.31	-1.2
1,857,659	-		LRK53_RS08260	0.31	-0.5
1,857,659	-		LRK53_RS08260	0.31	-0.3
1,857,659	-		LRK53_RS08260	0.31	-2.1
1,857,659	-		LRK53_RS08260	0.31	-0.9
1,857,659	-		LRK53_RS08260	0.31	-0.9
1,857,659	-		LRK53_RS08260	0.31	+0.0
1,857,664	+		LRK53_RS08260	0.31	+0.9
1,857,664	+		LRK53_RS08260	0.31	+3.0
1,857,664	+		LRK53_RS08260	0.31	-1.4
1,857,664	+		LRK53_RS08260	0.31	-2.0
1,857,664	+		LRK53_RS08260	0.31	-0.8
1,857,664	+		LRK53_RS08260	0.31	-1.1
1,857,664	+		LRK53_RS08260	0.31	-0.5
1,857,665	-		LRK53_RS08260	0.31	-2.0
1,857,665	-		LRK53_RS08260	0.31	-0.4
1,857,665	-		LRK53_RS08260	0.31	-0.8
1,857,833	-		LRK53_RS08260	0.44	-2.1
1,857,850	+		LRK53_RS08260	0.45	-0.5
1,857,850	+		LRK53_RS08260	0.45	-0.1
1,857,851	-		LRK53_RS08260	0.45	+0.2
1,857,851	-		LRK53_RS08260	0.45	-0.9
1,857,851	-		LRK53_RS08260	0.45	-2.6
1,857,851	-		LRK53_RS08260	0.45	-1.7
1,857,851	-		LRK53_RS08260	0.45	+0.1
1,857,880	+		LRK53_RS08260	0.47	-2.2
1,857,946	+		LRK53_RS08260	0.52	+0.0
1,857,946	+		LRK53_RS08260	0.52	-2.2
1,857,946	+		LRK53_RS08260	0.52	+1.2
1,857,946	+		LRK53_RS08260	0.52	-1.0
1,857,946	+		LRK53_RS08260	0.52	-0.2
1,857,946	+		LRK53_RS08260	0.52	-1.1
1,857,946	+		LRK53_RS08260	0.52	-0.3
1,857,946	+		LRK53_RS08260	0.52	-1.2
1,857,946	+		LRK53_RS08260	0.52	-0.2
1,857,946	+		LRK53_RS08260	0.52	-0.8
1,857,946	+		LRK53_RS08260	0.52	-1.0
1,857,946	+		LRK53_RS08260	0.52	-0.6
1,857,946	+		LRK53_RS08260	0.52	-1.4
1,857,946	+		LRK53_RS08260	0.52	+1.2
1,857,947	-		LRK53_RS08260	0.52	+0.6
1,857,947	-		LRK53_RS08260	0.52	-1.3
1,857,947	-		LRK53_RS08260	0.52	-0.4
1,857,947	-		LRK53_RS08260	0.52	-0.6
1,857,947	-		LRK53_RS08260	0.52	-1.9
1,857,947	-		LRK53_RS08260	0.52	-0.2
1,857,947	-		LRK53_RS08260	0.52	-0.9
1,857,947	-		LRK53_RS08260	0.52	-1.0
1,857,947	-		LRK53_RS08260	0.52	-1.2
1,857,947	-		LRK53_RS08260	0.52	-0.8
1,857,947	-		LRK53_RS08260	0.52	+0.5
1,857,947	-		LRK53_RS08260	0.52	-0.9
1,857,947	-		LRK53_RS08260	0.52	-1.7
1,857,947	-		LRK53_RS08260	0.52	-0.9
1,857,953	-		LRK53_RS08260	0.53	-0.9
1,857,953	-		LRK53_RS08260	0.53	-0.6
1,857,953	-		LRK53_RS08260	0.53	-0.7
1,858,013	-		LRK53_RS08260	0.57	-0.5
1,858,013	-		LRK53_RS08260	0.57	-1.3
1,858,013	-		LRK53_RS08260	0.57	+0.4
1,858,244	-		LRK53_RS08260	0.75	+0.2
1,858,334	+		LRK53_RS08260	0.81	-0.5
1,858,334	+		LRK53_RS08260	0.81	-0.8
1,858,334	+		LRK53_RS08260	0.81	+0.5
1,858,334	+		LRK53_RS08260	0.81	-1.1
1,858,334	+		LRK53_RS08260	0.81	-3.0
1,858,334	+		LRK53_RS08260	0.81	-1.1
1,858,335	-		LRK53_RS08260	0.81	-0.7
1,858,335	-		LRK53_RS08260	0.81	-0.7
1,858,335	-		LRK53_RS08260	0.81	-0.7
1,858,335	-		LRK53_RS08260	0.81	-0.9
1,858,335	-		LRK53_RS08260	0.81	-2.5
1,858,335	-		LRK53_RS08260	0.81	+1.0
1,858,335	-		LRK53_RS08260	0.81	-2.0
1,858,335	-		LRK53_RS08260	0.81	-1.4
1,858,621	+				-0.2
1,858,622	-				-0.2
1,858,622	-				-0.0
1,858,679	-				-1.5
1,858,774	+				-0.2
1,858,774	+				-1.5
1,858,969	+		LRK53_RS08265	0.26	-1.6
1,858,969	+		LRK53_RS08265	0.26	-0.5
1,858,970	-		LRK53_RS08265	0.26	-1.9
1,859,000	+		LRK53_RS08265	0.30	-1.8
1,859,000	+		LRK53_RS08265	0.30	+0.5
1,859,000	+		LRK53_RS08265	0.30	-1.8
1,859,000	+		LRK53_RS08265	0.30	-2.6
1,859,000	+		LRK53_RS08265	0.30	-0.9
1,859,000	+		LRK53_RS08265	0.30	+1.8
1,859,000	+		LRK53_RS08265	0.30	-1.7
1,859,001	-		LRK53_RS08265	0.30	+1.6
1,859,001	-		LRK53_RS08265	0.30	-3.4
1,859,001	-		LRK53_RS08265	0.30	-0.2
1,859,001	-		LRK53_RS08265	0.30	-1.6
1,859,001	-		LRK53_RS08265	0.30	+0.4
1,859,001	-		LRK53_RS08265	0.30	-0.9
1,859,001	-		LRK53_RS08265	0.30	+0.1
1,859,001	-		LRK53_RS08265	0.30	-3.0
1,859,140	+		LRK53_RS08265	0.47	-1.0
1,859,140	+		LRK53_RS08265	0.47	+1.2
1,859,140	+		LRK53_RS08265	0.47	-1.9
1,859,140	+		LRK53_RS08265	0.47	+0.7
1,859,140	+		LRK53_RS08265	0.47	+0.8
1,859,140	+		LRK53_RS08265	0.47	-1.2
1,859,141	-		LRK53_RS08265	0.48	-3.1
1,859,518	+				-0.5
1,859,519	-				-0.1
1,859,519	-				+0.6
1,859,519	-				-1.1