Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05885

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,362,903	+		LRK53_RS05875	0.88	-1.5
1,362,903	+		LRK53_RS05875	0.88	-1.0
1,362,903	+		LRK53_RS05875	0.88	-0.8
1,362,903	+		LRK53_RS05875	0.88	-0.7
1,362,904	-		LRK53_RS05875	0.88	-1.2
1,362,904	-		LRK53_RS05875	0.88	-0.5
1,362,904	-		LRK53_RS05875	0.88	-0.8
1,362,904	-		LRK53_RS05875	0.88	+0.1
1,362,904	-		LRK53_RS05875	0.88	-0.3
1,362,904	-		LRK53_RS05875	0.88	-0.6
1,362,904	-		LRK53_RS05875	0.88	-0.3
1,362,904	-		LRK53_RS05875	0.88	-0.5
1,362,975	+				-0.2
1,362,975	+				-1.4
1,362,975	+				-0.4
1,362,975	+				+0.1
1,362,975	+				-2.8
1,362,975	+				-1.6
1,362,975	+				-0.9
1,362,975	+				-0.9
1,362,975	+				-1.0
1,362,975	+				-0.9
1,362,975	+				+1.2
1,362,975	+				-0.1
1,362,975	+				-0.4
1,362,975	+				-1.1
1,362,975	+				-1.0
1,362,975	+				-1.2
1,362,975	+				-0.5
1,362,975	+				-1.1
1,362,975	+				-0.9
1,362,975	+				-1.6
1,362,975	+				-0.7
1,362,975	+				-1.3
1,362,975	+				-0.8
1,362,975	+				-1.6
1,362,975	+				-0.8
1,362,975	+				-1.3
1,362,975	+				-0.5
1,362,975	+				-2.4
1,362,975	+				-2.2
1,362,975	+				-2.1
1,362,975	+				-0.2
1,362,975	+				-0.6
1,362,975	+				-0.4
1,362,975	+				-1.5
1,362,975	+				-0.1
1,362,975	+				-1.7
1,362,975	+				+0.1
1,362,975	+				-1.3
1,362,975	+				-0.5
1,362,975	+				-1.4
1,362,975	+				-1.4
1,362,975	+				-2.1
1,362,975	+				-1.4
1,362,975	+				-1.1
1,362,975	+				-2.2
1,362,975	+				-1.1
1,362,975	+				-0.6
1,362,975	+				-0.9
1,362,975	+				-0.6
1,362,975	+				-0.5
1,362,975	+				-0.8
1,362,975	+				-0.5
1,362,975	+				+0.1
1,362,975	+				-0.7
1,362,975	+				-3.1
1,362,975	+				-0.3
1,362,975	+				-1.5
1,362,975	+				-1.2
1,362,975	+				-1.2
1,362,975	+				+0.3
1,362,975	+				-1.1
1,362,975	+				-2.0
1,362,975	+				-3.3
1,362,975	+				+0.3
1,362,975	+				+0.3
1,362,975	+				-1.6
1,362,975	+				-0.8
1,362,975	+				+1.3
1,362,975	+				-1.1
1,362,975	+				+0.6
1,362,975	+				-1.3
1,362,975	+				-0.5
1,362,975	+				-0.4
1,362,975	+				-1.2
1,362,975	+				-2.2
1,362,975	+				+0.1
1,362,975	+				-1.8
1,362,975	+				-2.1
1,362,975	+				-0.9
1,362,975	+				+0.6
1,362,975	+				-2.2
1,362,975	+				-0.7
1,362,975	+				-2.2
1,362,975	+				-1.3
1,362,975	+				-0.0
1,362,975	+				-1.8
1,362,975	+				-1.5
1,362,975	+				-1.2
1,362,975	+				-0.8
1,362,975	+				-0.2
1,362,975	+				-1.4
1,362,975	+				-0.6
1,362,975	+				-0.6
1,362,975	+				-0.6
1,362,975	+				-1.8
1,362,975	+				+0.2
1,362,976	-				-1.8
1,362,976	-				-1.4
1,362,976	-				-3.1
1,362,976	-				-2.7
1,362,976	-				-0.6
1,362,976	-				-0.3
1,362,976	-				-1.4
1,362,976	-				-1.0
1,362,976	-				-1.1
1,362,976	-				-0.8
1,362,976	-				-1.8
1,362,976	-				-1.2
1,362,976	-				-1.0
1,362,976	-				-3.0
1,362,976	-				+1.5
1,362,976	-				+0.7
1,362,976	-				+0.3
1,362,976	-				-1.7
1,362,976	-				-2.2
1,362,976	-				-1.2
1,362,976	-				-1.0
1,362,976	-				+1.9
1,362,976	-				-1.5
1,362,976	-				-0.8
1,362,976	-				-1.7
1,362,976	-				+0.1
1,362,976	-				-1.1
1,362,976	-				-2.3
1,362,976	-				+0.3
1,362,976	-				-2.4
1,362,976	-				-0.4
1,362,976	-				-2.6
1,362,976	-				-2.3
1,362,976	-				-1.7
1,362,976	-				-2.2
1,362,976	-				-0.8
1,362,976	-				-1.4
1,362,976	-				-1.9
1,362,976	-				-1.4
1,362,976	-				-0.7
1,362,976	-				-2.5
1,362,976	-				+1.5
1,362,976	-				-0.8
1,362,976	-				-0.7
1,362,976	-				-2.1
1,362,976	-				-1.1
1,362,976	-				+2.1
1,362,976	-				-1.1
1,362,976	-				-1.5
1,362,976	-				-3.2
1,362,976	-				-0.9
1,362,976	-				-1.0
1,362,976	-				-0.2
1,362,976	-				+0.3
1,362,976	-				-2.5
1,362,976	-				-1.8
1,362,976	-				-0.2
1,362,976	-				-3.2
1,362,976	-				-1.7
1,362,976	-				-3.3
1,362,976	-				-0.2
1,362,976	-				+0.5
1,362,976	-				-2.6
1,362,976	-				-1.2
1,362,976	-				-1.5
1,362,976	-				-0.9
1,362,976	-				-0.8
1,362,976	-				-0.9
1,362,976	-				-1.7
1,362,976	-				-0.5
1,362,976	-				-2.1
1,362,976	-				+1.9
1,362,976	-				+0.0
1,362,976	-				+0.0
1,362,976	-				-1.1
1,362,976	-				-2.8
1,362,976	-				-2.4
1,363,002	+				-2.6
1,363,002	+				-1.5
1,363,002	+				-0.6
1,363,002	+				-0.5
1,363,002	+				-1.4
1,363,002	+				-0.8
1,363,002	+				-1.3
1,363,003	-				-1.7
1,363,003	-				-0.7
1,363,003	-				+0.9
1,363,003	-				-0.1
1,363,003	-				-0.8
1,363,003	-				-2.2
1,363,003	-				-1.4
1,363,003	-				-1.6
1,363,003	-				-1.2
1,363,087	+				-0.5
1,363,087	+				+0.6
1,363,087	+				-0.8
1,363,087	+				-1.7
1,363,087	+				-0.8
1,363,087	+				-1.0
1,363,087	+				+0.8
1,363,087	+				-0.7
1,363,087	+				-1.5
1,363,088	-				-1.1
1,363,088	-				-1.2
1,363,088	-				-0.2
1,363,088	-				-3.2
1,363,088	-				-1.8
1,363,088	-				-1.6
1,363,088	-				-0.9
1,363,199	+				-0.1
1,363,199	+				-1.2
1,363,199	+				-1.9
1,363,199	+				+0.7
1,363,200	-				-0.8
1,363,200	-				-0.9
1,363,876	-				-0.9
1,363,876	-				-0.4
1,363,876	-				-1.3
1,363,938	+		LRK53_RS05885	0.20	-0.0
1,363,938	+		LRK53_RS05885	0.20	+0.6
1,363,939	-		LRK53_RS05885	0.20	-2.1
1,363,939	-		LRK53_RS05885	0.20	-0.8
1,363,989	+		LRK53_RS05885	0.28	-1.3
1,363,990	-		LRK53_RS05885	0.28	-2.8
1,364,163	+		LRK53_RS05885	0.56	+0.4
1,364,163	+		LRK53_RS05885	0.56	-0.8
1,364,163	+		LRK53_RS05885	0.56	+0.2
1,364,163	+		LRK53_RS05885	0.56	-0.4
1,364,164	-		LRK53_RS05885	0.56	-0.1
1,364,164	-		LRK53_RS05885	0.56	-1.0
1,364,164	-		LRK53_RS05885	0.56	+0.1
1,364,164	-		LRK53_RS05885	0.56	+1.0
1,364,164	-		LRK53_RS05885	0.56	-2.1
1,364,164	-		LRK53_RS05885	0.56	-1.3
1,364,253	+		LRK53_RS05885	0.71	-0.4
1,364,253	+		LRK53_RS05885	0.71	-0.5
1,364,253	+		LRK53_RS05885	0.71	-0.4
1,364,253	+		LRK53_RS05885	0.71	-2.0
1,364,253	+		LRK53_RS05885	0.71	-0.7
1,364,254	-		LRK53_RS05885	0.71	-0.8
1,364,254	-		LRK53_RS05885	0.71	-0.8
1,364,254	-		LRK53_RS05885	0.71	+1.0
1,364,274	+		LRK53_RS05885	0.74	-2.3
1,364,274	+		LRK53_RS05885	0.74	-1.2
1,364,274	+		LRK53_RS05885	0.74	+0.1
1,364,274	+		LRK53_RS05885	0.74	-0.8
1,364,274	+		LRK53_RS05885	0.74	+1.1
1,364,274	+		LRK53_RS05885	0.74	-1.5
1,364,274	+		LRK53_RS05885	0.74	+1.7
1,364,274	+		LRK53_RS05885	0.74	-1.3
1,364,274	+		LRK53_RS05885	0.74	+1.5
1,364,275	-		LRK53_RS05885	0.74	-0.4
1,364,275	-		LRK53_RS05885	0.74	+0.7
1,364,275	-		LRK53_RS05885	0.74	+0.2
1,364,275	-		LRK53_RS05885	0.74	+0.7
1,364,328	+		LRK53_RS05885	0.83	-0.7
1,364,328	+		LRK53_RS05885	0.83	+0.3
1,364,328	+		LRK53_RS05885	0.83	+0.3
1,364,328	+		LRK53_RS05885	0.83	+1.3
1,364,329	-		LRK53_RS05885	0.83	-0.6
1,364,329	-		LRK53_RS05885	0.83	-0.4
1,364,329	-		LRK53_RS05885	0.83	+0.0
1,364,329	-		LRK53_RS05885	0.83	+0.1
1,364,669	+		LRK53_RS05890	0.27	-1.1
1,364,669	+		LRK53_RS05890	0.27	-0.8
1,364,777	+		LRK53_RS05890	0.39	+0.2
1,364,831	+		LRK53_RS05890	0.46	-1.0
1,364,831	+		LRK53_RS05890	0.46	-1.5
1,364,831	+		LRK53_RS05890	0.46	-1.0
1,364,831	+		LRK53_RS05890	0.46	-0.8
1,364,831	+		LRK53_RS05890	0.46	-0.7
1,364,831	+		LRK53_RS05890	0.46	-0.8
1,364,831	+		LRK53_RS05890	0.46	-1.8
1,364,831	+		LRK53_RS05890	0.46	-1.3
1,364,831	+		LRK53_RS05890	0.46	-0.7
1,364,832	-		LRK53_RS05890	0.46	+0.0
1,364,832	-		LRK53_RS05890	0.46	-1.0
1,364,832	-		LRK53_RS05890	0.46	-2.7
1,364,832	-		LRK53_RS05890	0.46	+1.7
1,364,832	-		LRK53_RS05890	0.46	-0.3
1,364,832	-		LRK53_RS05890	0.46	-1.3
1,364,832	-		LRK53_RS05890	0.46	-2.0
1,364,861	+		LRK53_RS05890	0.49	+0.1
1,364,861	+		LRK53_RS05890	0.49	-0.2
1,364,861	+		LRK53_RS05890	0.49	-1.5
1,364,861	+		LRK53_RS05890	0.49	-1.6
1,364,862	-		LRK53_RS05890	0.49	-1.3
1,364,862	-		LRK53_RS05890	0.49	-0.1