Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS13300

Experiment: Psabiae_ML3b with MT80

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Psabiae_ML3b with MT80
2,976,072	+		QEN71_RS13295	0.62	+0.4
2,976,345	+		QEN71_RS13295	0.73	-0.2
2,976,345	+		QEN71_RS13295	0.73	-0.6
2,976,345	+		QEN71_RS13295	0.73	-0.4
2,976,345	+		QEN71_RS13295	0.73	-0.7
2,976,345	+		QEN71_RS13295	0.73	+0.4
2,976,345	+		QEN71_RS13295	0.73	+0.3
2,976,345	+		QEN71_RS13295	0.73	+0.5
2,976,345	+		QEN71_RS13295	0.73	+0.2
2,976,345	+		QEN71_RS13295	0.73	-0.8
2,976,346	-		QEN71_RS13295	0.73	+0.0
2,976,346	-		QEN71_RS13295	0.73	+1.5
2,976,346	-		QEN71_RS13295	0.73	-0.4
2,976,346	-		QEN71_RS13295	0.73	-0.1
2,976,346	-		QEN71_RS13295	0.73	-0.6
2,976,429	+		QEN71_RS13295	0.76	-0.6
2,976,429	+		QEN71_RS13295	0.76	-0.0
2,976,429	+		QEN71_RS13295	0.76	+0.3
2,976,429	+		QEN71_RS13295	0.76	-0.5
2,976,429	+		QEN71_RS13295	0.76	-1.0
2,976,430	-		QEN71_RS13295	0.76	+0.5
2,976,430	-		QEN71_RS13295	0.76	+0.4
2,976,430	-		QEN71_RS13295	0.76	+0.4
2,976,658	-		QEN71_RS13295	0.85	+0.7
2,976,658	-		QEN71_RS13295	0.85	-2.2
2,976,658	-		QEN71_RS13295	0.85	-0.5
2,976,763	+		QEN71_RS13295	0.89	-1.0
2,976,763	+		QEN71_RS13295	0.89	+0.3
2,976,763	+		QEN71_RS13295	0.89	-0.0
2,976,763	+		QEN71_RS13295	0.89	-1.3
2,976,764	-		QEN71_RS13295	0.89	+1.3
2,976,764	-		QEN71_RS13295	0.89	+0.6
2,976,977	+				-0.2
2,977,481	+		QEN71_RS13300	0.39	-0.8
2,977,481	+		QEN71_RS13300	0.39	-0.2
2,977,481	+		QEN71_RS13300	0.39	+1.8
2,977,482	-		QEN71_RS13300	0.39	-0.4
2,977,482	-		QEN71_RS13300	0.39	-1.1
2,977,489	-		QEN71_RS13300	0.40	+0.6
2,977,489	-		QEN71_RS13300	0.40	-0.1
2,977,604	+		QEN71_RS13300	0.50	+0.4
2,977,604	+		QEN71_RS13300	0.50	+0.4
2,977,604	+		QEN71_RS13300	0.50	+1.2
2,977,604	+		QEN71_RS13300	0.50	-0.5
2,977,604	+		QEN71_RS13300	0.50	-1.8
2,977,604	+		QEN71_RS13300	0.50	-0.4
2,977,605	-		QEN71_RS13300	0.50	+1.4
2,977,605	-		QEN71_RS13300	0.50	+0.6
2,977,605	-		QEN71_RS13300	0.50	-0.4
2,977,605	-		QEN71_RS13300	0.50	-1.4
2,977,605	-		QEN71_RS13300	0.50	-0.8
2,977,605	-		QEN71_RS13300	0.50	-1.1
2,977,605	-		QEN71_RS13300	0.50	-0.3
2,977,605	-		QEN71_RS13300	0.50	+0.2
2,977,607	+		QEN71_RS13300	0.50	+0.5
2,977,607	+		QEN71_RS13300	0.50	+0.1
2,977,607	+		QEN71_RS13300	0.50	-0.8
2,977,607	+		QEN71_RS13300	0.50	-0.7
2,977,607	+		QEN71_RS13300	0.50	+0.1
2,977,608	-		QEN71_RS13300	0.50	-0.2
2,977,608	-		QEN71_RS13300	0.50	-0.8
2,977,608	-		QEN71_RS13300	0.50	+0.0
2,977,608	-		QEN71_RS13300	0.50	+1.7
2,977,608	-		QEN71_RS13300	0.50	-0.3
2,977,608	-		QEN71_RS13300	0.50	+1.0
2,977,608	-		QEN71_RS13300	0.50	+0.2
2,977,608	-		QEN71_RS13300	0.50	-1.8
2,977,608	-		QEN71_RS13300	0.50	-0.6
2,977,608	-		QEN71_RS13300	0.50	-0.3
2,977,608	-		QEN71_RS13300	0.50	-1.1
2,977,608	-		QEN71_RS13300	0.50	-1.9
2,977,608	-		QEN71_RS13300	0.50	+0.5
2,977,610	+		QEN71_RS13300	0.51	-0.3
2,977,610	+		QEN71_RS13300	0.51	+0.1
2,977,610	+		QEN71_RS13300	0.51	-0.4
2,977,610	+		QEN71_RS13300	0.51	-0.6
2,977,611	-		QEN71_RS13300	0.51	+1.2
2,977,611	-		QEN71_RS13300	0.51	-0.9
2,977,611	-		QEN71_RS13300	0.51	+0.2
2,977,886	+		QEN71_RS13300	0.75	-0.6
2,977,886	+		QEN71_RS13300	0.75	-0.2
2,977,886	+		QEN71_RS13300	0.75	+0.4
2,977,887	-		QEN71_RS13300	0.75	-1.2
2,977,887	-		QEN71_RS13300	0.75	+1.0
2,977,887	-		QEN71_RS13300	0.75	-0.3
2,977,887	-		QEN71_RS13300	0.75	-0.8
2,977,952	+		QEN71_RS13300	0.81	-0.0
2,977,952	+		QEN71_RS13300	0.81	+0.1
2,978,054	+				+0.3
2,978,054	+				-1.0
2,978,054	+				+0.0
2,978,054	+				-0.7
2,978,055	-				+0.2
2,978,179	+				-0.3
2,978,180	-				-1.9
2,978,227	+				-0.0
2,978,227	+				+0.7
2,978,227	+				-0.6
2,978,228	-				-0.3
2,978,228	-				-0.6
2,978,228	-				-1.5
2,978,228	-				-1.5
2,978,234	-				-0.9
2,978,241	+				-0.0
2,978,241	+				+0.2
2,978,241	+				-0.4
2,978,241	+				+0.4
2,978,241	+				+0.4
2,978,242	-				+0.1
2,978,242	-				-0.0
2,978,242	-				-0.8
2,978,242	-				-0.2
2,978,245	+				-1.4
2,978,245	+				+0.1
2,978,245	+				+0.2
2,978,245	+				+0.0
2,978,245	+				-0.3
2,978,245	+				-0.2
2,978,245	+				+0.3
2,978,245	+				-0.6
2,978,245	+				+0.1
2,978,245	+				-0.9
2,978,245	+				+0.2
2,978,245	+				+0.7
2,978,245	+				-1.0
2,978,245	+				-0.9
2,978,245	+				-1.5
2,978,245	+				-0.4
2,978,245	+				-0.2
2,978,245	+				+0.7
2,978,245	+				+1.1
2,978,245	+				-0.1
2,978,246	-				-1.1
2,978,246	-				-0.7
2,978,246	-				-0.3
2,978,246	-				+0.3
2,978,246	-				-0.7
2,978,246	-				+2.5
2,978,246	-				-0.1
2,978,246	-				-0.1
2,978,246	-				-0.9
2,978,246	-				+0.1
2,978,246	-				+0.1
2,978,246	-				+0.9
2,978,246	-				+0.2
2,978,246	-				-0.3
2,978,246	-				-0.5
2,978,246	-				-0.1
2,978,246	-				+0.6
2,978,246	-				-0.9
2,978,246	-				-0.3
2,978,249	+				-0.5
2,978,249	+				-0.1
2,978,249	+				-0.2
2,978,249	+				+1.7
2,978,249	+				+0.1
2,978,249	+				+0.3
2,978,249	+				+1.3
2,978,249	+				-0.5
2,978,249	+				+0.7
2,978,249	+				-1.0
2,978,249	+				-0.4
2,978,250	-				+0.2
2,978,250	-				-0.2
2,978,250	-				+1.3
2,978,250	-				-1.0
2,978,250	-				+0.5
2,978,250	-				-0.2
2,978,250	-				-0.6
2,978,250	-				+1.7
2,978,250	-				-1.6
2,978,250	-				-0.8
2,978,250	-				+0.4
2,978,250	-				-0.3
2,978,250	-				+2.2
2,978,250	-				+0.2
2,978,250	-				+0.1
2,978,475	+		QEN71_RS13305	0.52	-0.6
2,978,476	-		QEN71_RS13305	0.52	-1.0
2,978,610	+				-0.5
2,978,610	+				-0.6
2,978,610	+				-0.3
2,978,610	+				-1.0
2,978,610	+				-0.1
2,978,611	-				+1.0
2,978,611	-				+1.1
2,978,611	-				-0.1
2,978,611	-				+0.0
2,978,611	-				+0.8
2,978,623	-				+0.7
2,978,656	-				+0.5
2,978,862	+		QEN71_RS13310	0.16	+1.5
2,978,862	+		QEN71_RS13310	0.16	-0.2
2,978,863	-		QEN71_RS13310	0.16	+0.3
2,978,863	-		QEN71_RS13310	0.16	-0.5
2,978,871	+		QEN71_RS13310	0.16	-2.3
2,978,872	-		QEN71_RS13310	0.16	-0.4
2,978,949	+		QEN71_RS13310	0.22	-0.2
2,978,992	-		QEN71_RS13310	0.25	+0.3
2,979,063	+		QEN71_RS13310	0.31	+0.3
2,979,063	+		QEN71_RS13310	0.31	-0.2
2,979,063	+		QEN71_RS13310	0.31	+0.1
2,979,064	-		QEN71_RS13310	0.31	+0.4
2,979,066	+		QEN71_RS13310	0.31	+0.3
2,979,066	+		QEN71_RS13310	0.31	+0.5
2,979,066	+		QEN71_RS13310	0.31	+1.2
2,979,067	-		QEN71_RS13310	0.31	+0.4
2,979,067	-		QEN71_RS13310	0.31	-0.4
2,979,067	-		QEN71_RS13310	0.31	+0.7
2,979,084	+		QEN71_RS13310	0.32	-0.1
2,979,084	+		QEN71_RS13310	0.32	-0.1
2,979,114	+		QEN71_RS13310	0.35	+0.3
2,979,114	+		QEN71_RS13310	0.35	-0.2
2,979,114	+		QEN71_RS13310	0.35	+0.0
2,979,115	-		QEN71_RS13310	0.35	+0.4
2,979,115	-		QEN71_RS13310	0.35	-1.6
2,979,115	-		QEN71_RS13310	0.35	-0.2
2,979,115	-		QEN71_RS13310	0.35	-0.7