Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03947

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
4,429,050	-				-0.4
4,429,101	-				-0.3
4,429,161	+				+0.6
4,429,246	+		MIT1002_03945	0.23	+0.3
4,429,256	-		MIT1002_03945	0.25	-0.6
4,429,265	+		MIT1002_03945	0.27	-1.1
4,429,266	+		MIT1002_03945	0.27	+0.9
4,429,266	+		MIT1002_03945	0.27	+0.2
4,429,276	+		MIT1002_03945	0.29	+1.1
4,429,375	-		MIT1002_03945	0.52	+0.4
4,429,399	+		MIT1002_03945	0.57	+0.1
4,429,422	-		MIT1002_03945	0.63	+0.3
4,429,483	-		MIT1002_03945	0.76	+0.6
4,429,564	-				+1.3
4,429,598	+				+0.5
4,429,598	+				+1.5
4,429,598	+				+0.2
4,429,598	+				+0.0
4,429,606	-				-0.2
4,429,635	-				+0.3
4,429,639	+				-0.1
4,429,683	-		MIT1002_03946	0.17	+0.9
4,429,683	-		MIT1002_03946	0.17	+0.1
4,429,694	+		MIT1002_03946	0.21	-1.9
4,429,694	+		MIT1002_03946	0.21	-1.3
4,429,695	-		MIT1002_03946	0.21	+1.1
4,429,841	+		MIT1002_03946	0.77	+0.3
4,429,841	+		MIT1002_03946	0.77	+0.9
4,429,966	+				-1.1
4,429,974	-				-1.5
4,429,990	-				+1.0
4,430,004	+				-0.3
4,430,148	+				+0.6
4,430,148	+				-0.1
4,430,156	-				-1.4
4,430,156	-				+2.3
4,430,156	-				+0.5
4,430,257	-		MIT1002_03947	0.12	-0.6
4,430,264	+		MIT1002_03947	0.12	-0.1
4,430,333	+		MIT1002_03947	0.15	+0.5
4,430,379	+		MIT1002_03947	0.18	+0.5
4,430,381	+		MIT1002_03947	0.18	-0.3
4,430,413	+		MIT1002_03947	0.19	+0.3
4,430,416	+		MIT1002_03947	0.19	-1.4
4,430,424	-		MIT1002_03947	0.20	-0.3
4,430,510	+		MIT1002_03947	0.24	-0.6
4,430,510	+		MIT1002_03947	0.24	-0.1
4,430,523	-		MIT1002_03947	0.24	+2.0
4,430,523	-		MIT1002_03947	0.24	-0.2
4,430,528	-		MIT1002_03947	0.24	-1.8
4,430,528	-		MIT1002_03947	0.24	-1.0
4,430,695	+		MIT1002_03947	0.32	+2.0
4,430,703	-		MIT1002_03947	0.33	-1.1
4,430,784	+		MIT1002_03947	0.36	-0.5
4,430,791	-		MIT1002_03947	0.37	-1.9
4,430,792	-		MIT1002_03947	0.37	-1.4
4,430,823	+		MIT1002_03947	0.38	+1.1
4,430,889	+		MIT1002_03947	0.41	+0.7
4,430,889	+		MIT1002_03947	0.41	+2.0
4,430,897	-		MIT1002_03947	0.42	-1.4
4,430,897	-		MIT1002_03947	0.42	+0.3
4,430,897	-		MIT1002_03947	0.42	-0.4
4,430,933	+		MIT1002_03947	0.43	-0.1
4,430,943	-		MIT1002_03947	0.44	+1.3
4,430,965	-		MIT1002_03947	0.45	-0.3
4,431,102	+		MIT1002_03947	0.51	+0.4
4,431,116	-		MIT1002_03947	0.52	+0.6
4,431,149	-		MIT1002_03947	0.54	-1.1
4,431,243	+		MIT1002_03947	0.58	-0.3
4,431,243	+		MIT1002_03947	0.58	+0.3
4,431,243	+		MIT1002_03947	0.58	-0.4
4,431,251	-		MIT1002_03947	0.58	+1.9
4,431,255	+		MIT1002_03947	0.59	+1.9
4,431,281	+		MIT1002_03947	0.60	+0.7
4,431,287	-		MIT1002_03947	0.60	-0.1
4,431,291	+		MIT1002_03947	0.60	-2.0
4,431,299	-		MIT1002_03947	0.61	-0.1
4,431,329	+		MIT1002_03947	0.62	-1.0
4,431,356	+		MIT1002_03947	0.63	-1.3
4,431,372	-		MIT1002_03947	0.64	+1.0
4,431,372	-		MIT1002_03947	0.64	+0.3
4,431,383	+		MIT1002_03947	0.65	-1.2
4,431,439	-		MIT1002_03947	0.67	-0.2
4,431,496	+		MIT1002_03947	0.70	+1.3
4,431,496	+		MIT1002_03947	0.70	+0.5
4,431,504	-		MIT1002_03947	0.70	+0.3
4,431,504	-		MIT1002_03947	0.70	+0.7
4,431,514	-		MIT1002_03947	0.71	+1.3
4,431,519	+		MIT1002_03947	0.71	-0.8
4,431,631	-		MIT1002_03947	0.76	-0.1
4,431,631	-		MIT1002_03947	0.76	-0.5
4,431,719	-		MIT1002_03947	0.80	-1.6
4,431,735	+		MIT1002_03947	0.81	+1.6
4,431,763	-		MIT1002_03947	0.82	-0.1
4,431,791	-		MIT1002_03947	0.84	+0.2
4,431,809	+		MIT1002_03947	0.84	+0.7
4,431,839	+		MIT1002_03947	0.86	+0.2
4,431,839	+		MIT1002_03947	0.86	-2.7
4,431,860	+		MIT1002_03947	0.87	-0.3
4,431,865	+		MIT1002_03947	0.87	+0.5
4,431,899	-		MIT1002_03947	0.89	+0.2
4,431,918	-		MIT1002_03947	0.90	+1.2
4,431,952	+				-0.1
4,431,989	+				+0.7
4,431,989	+				+0.3
4,431,995	-				-0.0
4,431,995	-				-1.1
4,431,995	-				-1.6
4,431,995	-				+0.5
4,431,997	-				+0.6
4,431,997	-				+0.5
4,431,997	-				-0.1
4,432,005	-				+0.9
4,432,007	-				-0.6
4,432,017	-				+0.2
4,432,073	+				-0.1
4,432,074	-				-0.5
4,432,154	-				-1.0
4,432,207	-				-1.4
4,432,239	-				-0.0
4,432,275	+				+0.3
4,432,275	+				+0.5
4,432,283	-				-0.7
4,432,340	-				-0.1
4,432,375	+				+0.3
4,432,377	+				-0.5
4,432,395	-				+0.2
4,432,476	+				-0.1
4,432,484	-				+0.1
4,432,521	+				+0.2
4,432,529	-				-0.5
4,432,609	-				+1.1
4,432,622	+				+0.9
4,432,630	-				-1.5
4,432,770	+		MIT1002_03948	0.20	-0.6
4,432,822	+		MIT1002_03948	0.47	+0.8
4,432,822	+		MIT1002_03948	0.47	+1.9
4,432,830	-		MIT1002_03948	0.51	-0.8
4,432,836	-		MIT1002_03948	0.54	-3.0
4,432,856	+		MIT1002_03948	0.65	+0.9
4,432,864	-		MIT1002_03948	0.69	+1.1
4,432,883	+		MIT1002_03948	0.79	+0.3
4,432,890	+		MIT1002_03948	0.82	-0.5
4,432,910	-				+1.4
4,432,927	+				-1.1
4,432,940	+				+2.4
4,432,950	+				+0.1
4,432,950	+				+1.3
4,432,950	+				+0.8
4,432,950	+				-0.8
4,432,950	+				+0.6
4,432,950	+				+0.8
4,432,950	+				-0.0
4,432,950	+				+0.4
4,432,950	+				+0.1
4,432,950	+				-0.2
4,432,950	+				-0.5
4,432,958	-				+1.2
4,432,958	-				-2.7
4,432,958	-				-1.5
4,432,958	-				-0.9
4,432,958	-				+1.0
4,432,958	-				-1.0
4,432,958	-				-0.8
4,432,958	-				-0.0
4,432,958	-				+0.2
4,432,958	-				-0.2
4,432,958	-				-2.2
4,432,958	-				+0.9
4,433,061	+		MIT1002_03949	0.23	+0.8
4,433,066	+		MIT1002_03949	0.24	-2.6
4,433,076	+		MIT1002_03949	0.25	+1.5