Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03860

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
4,324,213	+				-1.6
4,324,305	+				+0.9
4,324,329	+				-0.4
4,324,337	-				-2.5
4,324,361	+				+0.6
4,324,361	+				-1.7
4,324,361	+				+1.2
4,324,361	+				+0.3
4,324,389	+				+0.2
4,324,631	+		MIT1002_03859	0.24	-1.8
4,324,638	-		MIT1002_03859	0.26	+0.1
4,324,827	+		MIT1002_03859	0.56	-0.4
4,324,860	+		MIT1002_03859	0.61	-0.5
4,324,866	+		MIT1002_03859	0.62	+0.8
4,324,904	+		MIT1002_03859	0.68	-0.6
4,324,905	+		MIT1002_03859	0.68	-0.3
4,324,905	+		MIT1002_03859	0.68	-2.6
4,324,946	+		MIT1002_03859	0.75	-0.5
4,324,977	+		MIT1002_03859	0.80	-1.1
4,325,048	+				-0.8
4,325,048	+				+0.7
4,325,056	-				-0.6
4,325,056	-				-0.6
4,325,063	-				-1.7
4,325,146	-				+0.6
4,325,204	-				+0.8
4,325,361	+		MIT1002_03860	0.35	+0.1
4,325,402	-		MIT1002_03860	0.44	-1.0
4,325,434	-		MIT1002_03860	0.51	-2.5
4,325,486	+		MIT1002_03860	0.63	-2.6
4,325,579	+		MIT1002_03860	0.83	+0.5
4,325,585	+		MIT1002_03860	0.85	-1.9
4,325,593	-		MIT1002_03860	0.87	-2.8
4,325,593	-		MIT1002_03860	0.87	+0.1
4,325,607	-		MIT1002_03860	0.90	+0.2
4,325,763	-				+0.6
4,325,763	-				+0.3
4,325,799	-				+0.7
4,325,799	-				-2.5
4,325,806	-				-0.0
4,325,843	+		MIT1002_03861	0.10	-0.5
4,325,843	-		MIT1002_03861	0.10	+0.4
4,325,851	-		MIT1002_03861	0.11	+0.2
4,325,928	+		MIT1002_03861	0.19	+0.4
4,325,931	-		MIT1002_03861	0.20	+1.2
4,325,941	-		MIT1002_03861	0.21	+1.1
4,325,964	-		MIT1002_03861	0.23	-1.2
4,326,010	+		MIT1002_03861	0.28	+0.9
4,326,070	-		MIT1002_03861	0.35	-0.3
4,326,119	+		MIT1002_03861	0.40	+0.7
4,326,127	-		MIT1002_03861	0.41	+0.8
4,326,143	+		MIT1002_03861	0.43	+0.3
4,326,153	+		MIT1002_03861	0.44	+0.5
4,326,159	-		MIT1002_03861	0.44	+1.8
4,326,170	+		MIT1002_03861	0.46	-0.6
4,326,171	-		MIT1002_03861	0.46	-0.9
4,326,211	-		MIT1002_03861	0.50	-0.2
4,326,218	+		MIT1002_03861	0.51	-1.3
4,326,339	-		MIT1002_03861	0.64	-0.5
4,326,339	-		MIT1002_03861	0.64	+0.5
4,326,376	-		MIT1002_03861	0.68	+0.5
4,326,490	-		MIT1002_03861	0.80	+1.3
4,326,509	+		MIT1002_03861	0.82	+1.4
4,326,622	+				+0.8
4,326,622	+				+1.7