Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03770

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
4,213,807	+		MIT1002_03768	0.88	+0.9
4,213,812	+		MIT1002_03768	0.88	+1.6
4,213,815	-		MIT1002_03768	0.88	-1.3
4,213,825	+		MIT1002_03768	0.89	-2.2
4,213,825	+		MIT1002_03768	0.89	-1.2
4,213,825	+		MIT1002_03768	0.89	-0.4
4,213,833	-		MIT1002_03768	0.89	+0.4
4,213,833	-		MIT1002_03768	0.89	-0.5
4,213,833	-		MIT1002_03768	0.89	-1.2
4,213,835	+		MIT1002_03768	0.90	+2.7
4,213,959	-				+0.7
4,213,989	-				+1.5
4,214,124	-				-0.3
4,214,125	-				-1.0
4,214,140	+				+1.2
4,214,140	+				+0.0
4,214,140	+				+0.9
4,214,140	+				+0.8
4,214,148	-				-1.8
4,214,193	-		MIT1002_03769	0.14	-1.7
4,214,196	+		MIT1002_03769	0.14	+0.4
4,214,201	+		MIT1002_03769	0.15	-0.7
4,214,201	+		MIT1002_03769	0.15	-0.9
4,214,201	+		MIT1002_03769	0.15	+0.3
4,214,209	-		MIT1002_03769	0.16	+0.2
4,214,209	-		MIT1002_03769	0.16	-0.8
4,214,209	-		MIT1002_03769	0.16	+0.7
4,214,209	-		MIT1002_03769	0.16	+0.5
4,214,239	+		MIT1002_03769	0.22	+0.0
4,214,293	-		MIT1002_03769	0.31	+2.9
4,214,340	-		MIT1002_03769	0.39	+1.4
4,214,345	+		MIT1002_03769	0.40	+0.7
4,214,376	-		MIT1002_03769	0.45	+0.5
4,214,376	-		MIT1002_03769	0.45	+0.9
4,214,380	+		MIT1002_03769	0.46	-0.5
4,214,387	+		MIT1002_03769	0.47	+0.8
4,214,505	+		MIT1002_03769	0.68	-0.2
4,214,521	+		MIT1002_03769	0.71	+2.0
4,214,553	+		MIT1002_03769	0.76	-2.1
4,214,561	+		MIT1002_03769	0.78	-1.1
4,214,572	+		MIT1002_03769	0.80	-3.2
4,214,590	-		MIT1002_03769	0.83	-0.2
4,214,590	-		MIT1002_03769	0.83	+0.3
4,214,596	+		MIT1002_03769	0.84	-3.2
4,214,617	+		MIT1002_03769	0.87	+0.8
4,214,625	-		MIT1002_03769	0.89	-0.4
4,214,639	+				+0.0
4,214,649	-				-0.3
4,214,649	-				+0.3
4,214,649	-				-0.4
4,214,683	+				+0.8
4,214,686	-				-1.4
4,214,686	-				+1.5
4,214,716	-				+0.2
4,214,801	+				-0.7
4,214,809	-				+0.9
4,214,809	-				-1.1
4,214,831	+				+0.3
4,214,839	-				+0.7
4,214,841	+				-2.9
4,214,849	-				+0.4
4,214,849	-				-0.4
4,214,854	-				-0.8
4,214,864	-				-0.9
4,215,029	-		MIT1002_03770	0.25	-1.6
4,215,083	-		MIT1002_03770	0.30	-0.1
4,215,098	-		MIT1002_03770	0.32	-1.7
4,215,143	+		MIT1002_03770	0.36	-0.5
4,215,143	+		MIT1002_03770	0.36	-2.0
4,215,145	+		MIT1002_03770	0.37	-0.2
4,215,261	+		MIT1002_03770	0.49	-0.6
4,215,271	+		MIT1002_03770	0.50	-3.0
4,215,306	-		MIT1002_03770	0.53	-0.8
4,215,334	+		MIT1002_03770	0.56	+1.0
4,215,335	-		MIT1002_03770	0.56	-0.0
4,215,604	+		MIT1002_03770	0.84	-1.7
4,215,604	+		MIT1002_03770	0.84	-3.5
4,215,618	-		MIT1002_03770	0.85	-0.3
4,215,664	-				-0.4
4,215,680	+				-0.3
4,215,703	-				-1.4
4,215,762	-				+0.5
4,215,806	-				+1.9
4,215,806	-				-1.2
4,215,820	-				-2.1
4,215,847	+				+0.9
4,215,855	-				-0.7
4,215,855	-				-0.2
4,215,927	+				+0.3
4,215,929	-				+2.4
4,215,935	-				+1.6
4,215,935	-				-0.1
4,215,937	+				+0.9
4,215,954	-				+0.1
4,216,101	-				+0.4
4,216,187	-		MIT1002_03771	0.12	-0.1
4,216,224	+		MIT1002_03771	0.15	+0.8
4,216,271	+		MIT1002_03771	0.19	-0.8
4,216,271	+		MIT1002_03771	0.19	+0.2
4,216,271	+		MIT1002_03771	0.19	+2.5
4,216,271	+		MIT1002_03771	0.19	+0.2
4,216,271	+		MIT1002_03771	0.19	+0.0
4,216,271	+		MIT1002_03771	0.19	+0.4
4,216,279	-		MIT1002_03771	0.20	+2.3
4,216,281	+		MIT1002_03771	0.20	+0.8
4,216,281	+		MIT1002_03771	0.20	+2.8
4,216,322	+		MIT1002_03771	0.24	-0.7
4,216,396	-		MIT1002_03771	0.30	-1.8
4,216,440	-		MIT1002_03771	0.34	+0.8
4,216,516	-		MIT1002_03771	0.40	-0.5
4,216,519	+		MIT1002_03771	0.40	+1.2
4,216,519	+		MIT1002_03771	0.40	-2.1
4,216,552	-		MIT1002_03771	0.43	-0.5
4,216,670	+		MIT1002_03771	0.53	+0.2
4,216,701	+		MIT1002_03771	0.56	-0.9
4,216,748	+		MIT1002_03771	0.60	-0.5