Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03755

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
4,194,978	-				+0.7
4,195,120	+		MIT1002_03754	0.13	-0.5
4,195,161	-		MIT1002_03754	0.18	-3.6
4,195,186	-		MIT1002_03754	0.21	+0.7
4,195,191	-		MIT1002_03754	0.22	+0.2
4,195,307	+		MIT1002_03754	0.36	-0.8
4,195,361	+		MIT1002_03754	0.42	+0.2
4,195,392	+		MIT1002_03754	0.46	-0.3
4,195,423	+		MIT1002_03754	0.50	-1.4
4,195,438	+		MIT1002_03754	0.52	-0.4
4,195,519	-		MIT1002_03754	0.62	-1.2
4,195,519	-		MIT1002_03754	0.62	-0.2
4,195,528	-		MIT1002_03754	0.63	-2.0
4,195,538	+		MIT1002_03754	0.64	+0.4
4,195,580	-		MIT1002_03754	0.69	-0.7
4,195,767	+				+2.7
4,195,767	+				+1.5
4,195,767	+				+2.1
4,195,767	+				-0.6
4,195,767	+				-1.8
4,195,767	+				+0.8
4,195,767	+				-1.4
4,195,775	-				-0.4
4,195,775	-				+0.9
4,195,775	-				+1.0
4,195,775	-				+0.1
4,195,785	-				-0.7
4,195,825	+				+1.0
4,196,006	-				-0.6
4,196,034	-				-0.5
4,196,049	-				-0.1
4,196,075	-				+0.2
4,196,089	+		MIT1002_03755	0.10	-0.3
4,196,128	-		MIT1002_03755	0.13	+0.6
4,196,177	+		MIT1002_03755	0.17	-0.4
4,196,203	+		MIT1002_03755	0.19	+1.4
4,196,225	+		MIT1002_03755	0.21	-0.1
4,196,226	-		MIT1002_03755	0.21	-2.5
4,196,293	+		MIT1002_03755	0.26	-0.4
4,196,304	+		MIT1002_03755	0.27	-0.6
4,196,306	-		MIT1002_03755	0.28	-0.6
4,196,314	+		MIT1002_03755	0.28	+0.1
4,196,314	+		MIT1002_03755	0.28	+1.1
4,196,314	+		MIT1002_03755	0.28	-1.2
4,196,314	-		MIT1002_03755	0.28	-2.1
4,196,316	+		MIT1002_03755	0.28	-0.7
4,196,327	+		MIT1002_03755	0.29	+0.2
4,196,327	+		MIT1002_03755	0.29	-1.7
4,196,337	+		MIT1002_03755	0.30	+1.0
4,196,406	+		MIT1002_03755	0.35	-1.1
4,196,406	+		MIT1002_03755	0.35	-2.4
4,196,414	-		MIT1002_03755	0.36	-0.8
4,196,431	-		MIT1002_03755	0.37	-0.3
4,196,440	+		MIT1002_03755	0.38	-0.1
4,196,445	+		MIT1002_03755	0.38	-1.6
4,196,448	-		MIT1002_03755	0.39	-1.0
4,196,448	-		MIT1002_03755	0.39	-1.3
4,196,452	+		MIT1002_03755	0.39	-2.2
4,196,459	-		MIT1002_03755	0.40	-1.5
4,196,460	-		MIT1002_03755	0.40	-0.0
4,196,477	+		MIT1002_03755	0.41	-2.6
4,196,600	+		MIT1002_03755	0.51	-0.6
4,196,608	-		MIT1002_03755	0.51	+0.5
4,196,615	+		MIT1002_03755	0.52	-0.3
4,196,632	+		MIT1002_03755	0.53	-0.5
4,196,637	+		MIT1002_03755	0.54	-0.4
4,196,647	-		MIT1002_03755	0.54	+1.2
4,196,668	-		MIT1002_03755	0.56	-2.0
4,196,671	-		MIT1002_03755	0.56	-0.8
4,196,692	-		MIT1002_03755	0.58	+2.8
4,196,692	-		MIT1002_03755	0.58	+0.4
4,196,726	-		MIT1002_03755	0.61	-2.4
4,196,741	-		MIT1002_03755	0.62	-1.4
4,196,807	+		MIT1002_03755	0.67	-0.9
4,196,812	+		MIT1002_03755	0.67	+0.2
4,196,820	-		MIT1002_03755	0.68	+0.2
4,196,830	-		MIT1002_03755	0.69	-1.1
4,196,830	-		MIT1002_03755	0.69	-0.2
4,196,840	-		MIT1002_03755	0.70	-0.2
4,196,884	-		MIT1002_03755	0.73	-2.8
4,196,900	-		MIT1002_03755	0.74	-2.3
4,196,966	+		MIT1002_03755	0.80	-1.4
4,196,985	-		MIT1002_03755	0.81	+0.2
4,197,083	-		MIT1002_03755	0.89	-1.3
4,197,098	-		MIT1002_03755	0.90	-0.8
4,197,144	+				+0.4
4,197,221	+				+0.1
4,197,229	-				+1.4
4,197,254	+				+0.6
4,197,267	+				-1.6
4,197,267	+				+0.7
4,197,275	-				+2.1
4,197,275	-				+1.6
4,197,398	-				+0.8
4,197,483	-				+1.6
4,197,542	+				+1.9
4,197,610	+				+2.0
4,197,756	+		MIT1002_03756	0.15	+0.2
4,197,761	+		MIT1002_03756	0.16	+1.4
4,197,761	+		MIT1002_03756	0.16	+2.1
4,197,776	+		MIT1002_03756	0.17	+0.8
4,197,776	+		MIT1002_03756	0.17	+2.3
4,197,784	-		MIT1002_03756	0.17	+0.1
4,197,784	-		MIT1002_03756	0.17	+2.3
4,197,792	-		MIT1002_03756	0.17	+1.6
4,197,835	+		MIT1002_03756	0.20	+3.4
4,197,887	+		MIT1002_03756	0.22	-1.7
4,197,905	+		MIT1002_03756	0.23	+0.8
4,197,920	-		MIT1002_03756	0.24	+1.7
4,197,922	+		MIT1002_03756	0.24	+1.0
4,197,940	-		MIT1002_03756	0.25	+2.3
4,198,013	+		MIT1002_03756	0.29	-0.3
4,198,013	+		MIT1002_03756	0.29	+2.1
4,198,013	+		MIT1002_03756	0.29	+1.8
4,198,014	-		MIT1002_03756	0.29	+2.1
4,198,021	-		MIT1002_03756	0.29	+3.1
4,198,026	+		MIT1002_03756	0.29	+1.9
4,198,026	+		MIT1002_03756	0.29	+2.1
4,198,045	-		MIT1002_03756	0.30	+1.2
4,198,143	+		MIT1002_03756	0.35	+1.1
4,198,143	+		MIT1002_03756	0.35	+0.6
4,198,151	-		MIT1002_03756	0.36	+1.2
4,198,151	-		MIT1002_03756	0.36	+1.8
4,198,151	-		MIT1002_03756	0.36	+2.7
4,198,151	-		MIT1002_03756	0.36	+2.3
4,198,166	-		MIT1002_03756	0.37	+2.9