Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03712

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
4,146,237	-		MIT1002_03710	0.56	+0.5
4,146,308	-		MIT1002_03710	0.65	+2.1
4,146,345	-		MIT1002_03710	0.69	-0.1
4,146,345	-		MIT1002_03710	0.69	-0.9
4,146,384	-		MIT1002_03710	0.74	-0.9
4,146,512	-		MIT1002_03710	0.89	-0.7
4,146,514	+		MIT1002_03710	0.89	+0.8
4,146,573	+				+0.3
4,146,618	+				-0.2
4,146,618	+				-2.5
4,146,618	+				-2.2
4,146,659	-				-0.0
4,146,673	+				+0.2
4,146,675	+				-0.6
4,146,675	+				+0.1
4,146,683	-				-0.3
4,146,708	+				+0.4
4,146,754	+		MIT1002_03711	0.18	+0.2
4,146,789	+		MIT1002_03711	0.25	-0.2
4,146,873	-		MIT1002_03711	0.40	-0.9
4,146,889	-		MIT1002_03711	0.44	-0.2
4,146,948	+		MIT1002_03711	0.55	+0.4
4,146,948	+		MIT1002_03711	0.55	+0.9
4,146,987	-		MIT1002_03711	0.62	-2.7
4,147,003	+		MIT1002_03711	0.65	+0.7
4,147,013	+		MIT1002_03711	0.67	+0.9
4,147,013	+		MIT1002_03711	0.67	+2.3
4,147,027	+		MIT1002_03711	0.69	+0.1
4,147,060	+		MIT1002_03711	0.76	-0.4
4,147,092	+		MIT1002_03711	0.82	-1.6
4,147,115	-		MIT1002_03711	0.86	-1.4
4,147,173	-				-0.4
4,147,198	+				+0.2
4,147,245	-				-2.4
4,147,280	-				+0.8
4,147,295	-		MIT1002_03712	0.10	-1.9
4,147,381	+		MIT1002_03712	0.24	+2.4
4,147,401	+		MIT1002_03712	0.28	-0.9
4,147,409	+		MIT1002_03712	0.29	+1.7
4,147,417	-		MIT1002_03712	0.30	-1.3
4,147,483	+		MIT1002_03712	0.41	-1.3
4,147,505	+		MIT1002_03712	0.45	+0.2
4,147,540	+		MIT1002_03712	0.51	+1.3
4,147,567	+		MIT1002_03712	0.55	+0.9
4,147,608	-		MIT1002_03712	0.62	+0.7
4,147,628	+		MIT1002_03712	0.66	-2.6
4,147,693	-		MIT1002_03712	0.76	-0.8
4,147,736	-		MIT1002_03712	0.83	-0.0
4,147,776	+				+0.3
4,147,779	-				+0.1
4,147,863	-				+0.1
4,147,898	-				+0.6
4,147,964	+				-0.7
4,147,972	-				+0.9
4,148,025	-		MIT1002_03713	0.13	+0.5
4,148,040	+		MIT1002_03713	0.17	+1.0
4,148,067	-		MIT1002_03713	0.25	-2.1
4,148,068	-		MIT1002_03713	0.25	-0.5
4,148,101	+		MIT1002_03713	0.35	+1.0
4,148,101	+		MIT1002_03713	0.35	+1.0
4,148,108	+		MIT1002_03713	0.37	-1.9
4,148,119	+		MIT1002_03713	0.40	+0.9
4,148,140	+		MIT1002_03713	0.46	-1.0
4,148,140	+		MIT1002_03713	0.46	-0.8
4,148,140	+		MIT1002_03713	0.46	+0.5
4,148,140	+		MIT1002_03713	0.46	+0.5
4,148,140	+		MIT1002_03713	0.46	-0.7
4,148,140	+		MIT1002_03713	0.46	+1.0
4,148,140	+		MIT1002_03713	0.46	-0.9
4,148,148	-		MIT1002_03713	0.48	-3.6
4,148,211	+		MIT1002_03713	0.66	+3.4
4,148,220	+		MIT1002_03713	0.69	+2.1
4,148,220	+		MIT1002_03713	0.69	+0.2
4,148,220	+		MIT1002_03713	0.69	+0.2
4,148,228	-		MIT1002_03713	0.71	-0.8
4,148,229	+		MIT1002_03713	0.71	-1.3
4,148,247	+		MIT1002_03713	0.76	+0.4
4,148,344	+				+0.9
4,148,344	+				+1.2
4,148,352	-				-1.6
4,148,397	+				-0.0
4,148,399	+				-1.8
4,148,399	+				+0.8
4,148,407	-				+2.8
4,148,410	-				+0.5
4,148,426	+				-2.9
4,148,451	-				+1.1
4,148,456	-				-2.0
4,148,458	+				-1.0
4,148,458	+				+0.5
4,148,458	+				-0.9
4,148,475	+				-0.3
4,148,477	-				-1.5
4,148,483	-				-4.0
4,148,490	+		MIT1002_03714	0.10	+0.7
4,148,502	+		MIT1002_03714	0.11	+1.8
4,148,533	+		MIT1002_03714	0.13	-2.8
4,148,541	-		MIT1002_03714	0.13	+0.1
4,148,564	+		MIT1002_03714	0.15	-1.3
4,148,704	-		MIT1002_03714	0.23	-0.3
4,148,722	-		MIT1002_03714	0.24	+1.4
4,148,756	+		MIT1002_03714	0.27	+0.4
4,148,758	+		MIT1002_03714	0.27	+0.4
4,148,766	+		MIT1002_03714	0.27	+0.5
4,148,766	-		MIT1002_03714	0.27	-0.6
4,148,766	-		MIT1002_03714	0.27	+0.6
4,148,766	-		MIT1002_03714	0.27	+1.6
4,148,774	-		MIT1002_03714	0.28	-2.5
4,148,784	-		MIT1002_03714	0.28	+0.8
4,148,797	-		MIT1002_03714	0.29	-0.2
4,148,814	+		MIT1002_03714	0.30	+0.2
4,148,828	-		MIT1002_03714	0.31	-1.1
4,148,834	-		MIT1002_03714	0.31	-1.2