Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03700

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
4,130,511	-		MIT1002_03698	0.83	-3.1
4,130,511	-		MIT1002_03698	0.83	-2.9
4,130,600	-				-1.8
4,130,644	-				+0.6
4,130,653	-				+0.6
4,130,656	+				+0.8
4,130,679	+				-0.9
4,130,733	+		MIT1002_03699	0.13	-0.3
4,130,772	-		MIT1002_03699	0.18	-1.1
4,130,775	-		MIT1002_03699	0.19	-2.5
4,130,775	-		MIT1002_03699	0.19	-2.7
4,130,889	+		MIT1002_03699	0.33	-0.8
4,130,897	-		MIT1002_03699	0.34	-0.5
4,130,940	+		MIT1002_03699	0.39	+0.2
4,130,948	-		MIT1002_03699	0.40	+0.4
4,130,948	-		MIT1002_03699	0.40	+0.1
4,130,948	-		MIT1002_03699	0.40	-2.1
4,131,020	-		MIT1002_03699	0.49	+0.1
4,131,020	-		MIT1002_03699	0.49	+0.3
4,131,020	-		MIT1002_03699	0.49	-0.6
4,131,098	+		MIT1002_03699	0.58	-0.8
4,131,099	-		MIT1002_03699	0.58	-0.3
4,131,122	-		MIT1002_03699	0.61	-1.3
4,131,164	+		MIT1002_03699	0.66	-2.3
4,131,164	+		MIT1002_03699	0.66	+0.7
4,131,164	+		MIT1002_03699	0.66	-4.7
4,131,172	-		MIT1002_03699	0.67	+2.1
4,131,207	+		MIT1002_03699	0.72	-1.9
4,131,207	+		MIT1002_03699	0.72	+0.9
4,131,215	-		MIT1002_03699	0.73	-0.9
4,131,256	+		MIT1002_03699	0.78	-0.3
4,131,321	-		MIT1002_03699	0.86	-0.3
4,131,357	+				-1.4
4,131,410	+				-2.0
4,131,451	+				-1.2
4,131,456	+				+1.0
4,131,464	-				-1.8
4,131,625	-		MIT1002_03700	0.17	-0.4
4,131,629	+		MIT1002_03700	0.18	-2.9
4,131,662	+		MIT1002_03700	0.21	+1.6
4,131,739	+		MIT1002_03700	0.29	+0.0
4,131,741	-		MIT1002_03700	0.30	+1.2
4,131,765	-		MIT1002_03700	0.32	-0.2
4,131,765	-		MIT1002_03700	0.32	-0.2
4,131,827	+		MIT1002_03700	0.39	+0.9
4,131,835	-		MIT1002_03700	0.40	+1.2
4,131,835	-		MIT1002_03700	0.40	+0.7
4,131,840	-		MIT1002_03700	0.40	-0.4
4,131,867	+		MIT1002_03700	0.43	+2.2
4,131,875	-		MIT1002_03700	0.44	-0.3
4,131,875	-		MIT1002_03700	0.44	-0.0
4,131,905	+		MIT1002_03700	0.47	-0.7
4,131,947	-		MIT1002_03700	0.52	+2.1
4,131,972	+		MIT1002_03700	0.55	+0.5
4,131,979	+		MIT1002_03700	0.55	+0.5
4,132,073	-		MIT1002_03700	0.65	+0.5
4,132,073	-		MIT1002_03700	0.65	+0.3
4,132,080	+		MIT1002_03700	0.66	+0.3
4,132,080	+		MIT1002_03700	0.66	+1.7
4,132,088	-		MIT1002_03700	0.67	-0.1
4,132,208	-		MIT1002_03700	0.80	+0.1
4,132,373	+				-2.0
4,132,437	-				+0.6
4,132,455	-				+1.8
4,132,455	-				-1.1
4,132,515	-				-3.3
4,132,522	+				+1.0
4,132,530	-				-0.6
4,132,530	-				+0.2
4,132,571	+				-2.8
4,132,571	+				+0.4
4,132,581	+				-1.2
4,132,657	+				-0.3
4,132,658	+				-1.0
4,132,669	+				+1.5
4,132,676	+				+1.2
4,132,676	+				+0.4
4,132,677	-				-0.9
4,132,681	+				+1.2
4,132,684	-				-0.4
4,132,684	-				-2.0
4,132,684	-				-0.9
4,132,684	-				-0.6
4,132,691	+				+1.4
4,132,696	+				-2.5
4,132,712	+				-1.5
4,132,723	+				+0.5
4,132,730	+				+0.5
4,132,730	+				+2.3
4,132,730	+				-0.3
4,132,738	-				+2.0
4,132,744	-				-0.2
4,132,768	-				-0.9
4,132,777	+				+0.5
4,132,777	+				-1.0
4,132,777	+				+0.0
4,132,782	+				+2.0
4,132,784	+				-0.6
4,132,789	+				-0.5
4,132,790	-				+0.5
4,132,828	+				+2.1
4,132,859	+				-1.8
4,132,981	+				-3.1
4,132,986	-				+0.3
4,133,020	+				-1.2
4,133,045	+				-0.1
4,133,053	-				-1.3
4,133,089	+				+1.3
4,133,089	+				+2.1
4,133,099	-				+3.0
4,133,134	-				+0.6
4,133,209	+		MIT1002_03701	0.11	+0.4
4,133,212	-		MIT1002_03701	0.11	-1.7
4,133,212	-		MIT1002_03701	0.11	+1.3
4,133,217	-		MIT1002_03701	0.12	+0.1
4,133,233	+		MIT1002_03701	0.14	+0.2
4,133,234	-		MIT1002_03701	0.14	+0.9
4,133,241	-		MIT1002_03701	0.15	+1.6
4,133,247	-		MIT1002_03701	0.16	-1.5
4,133,266	+		MIT1002_03701	0.19	+1.3
4,133,321	+		MIT1002_03701	0.27	+0.2
4,133,322	+		MIT1002_03701	0.27	-0.2
4,133,330	-		MIT1002_03701	0.28	+0.4
4,133,330	-		MIT1002_03701	0.28	+2.0
4,133,330	-		MIT1002_03701	0.28	+0.5
4,133,330	-		MIT1002_03701	0.28	-0.6