Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03354

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
3,751,528	+		MIT1002_03353	0.40	+1.6
3,751,538	-		MIT1002_03353	0.41	-0.7
3,751,600	-		MIT1002_03353	0.46	-0.9
3,751,688	+		MIT1002_03353	0.54	-0.5
3,751,743	+		MIT1002_03353	0.58	+0.1
3,751,743	+		MIT1002_03353	0.58	-1.8
3,751,751	-		MIT1002_03353	0.59	+2.2
3,751,751	-		MIT1002_03353	0.59	+0.7
3,751,751	-		MIT1002_03353	0.59	+1.5
3,751,762	-		MIT1002_03353	0.60	+0.2
3,751,762	-		MIT1002_03353	0.60	-1.1
3,751,771	+		MIT1002_03353	0.61	+0.5
3,751,797	-		MIT1002_03353	0.63	-0.5
3,751,804	+		MIT1002_03353	0.64	+0.4
3,751,818	+		MIT1002_03353	0.65	+2.9
3,751,882	-		MIT1002_03353	0.70	-0.3
3,751,902	-		MIT1002_03353	0.72	-1.6
3,751,978	+		MIT1002_03353	0.78	+1.1
3,751,986	-		MIT1002_03353	0.79	+0.1
3,752,055	+		MIT1002_03353	0.85	-1.4
3,752,098	+		MIT1002_03353	0.89	+0.6
3,752,187	-				+1.8
3,752,218	+				+0.5
3,752,238	+				-0.5
3,752,238	+				-1.4
3,752,246	-				+0.1
3,752,255	+				-0.8
3,752,263	+				-0.5
3,752,263	+				-0.0
3,752,270	+				+0.1
3,752,270	+				+0.3
3,752,270	+				+1.4
3,752,271	-				-3.6
3,752,278	-				-0.0
3,752,278	-				-1.4
3,752,315	-				+1.3
3,752,442	+				+0.1
3,752,442	+				-3.9
3,752,450	-				-0.8
3,752,450	-				-1.1
3,752,533	+				-1.3
3,752,620	+		MIT1002_03354	0.31	-1.1
3,752,698	-		MIT1002_03354	0.52	-0.4
3,752,698	-		MIT1002_03354	0.52	+1.1
3,752,753	-		MIT1002_03354	0.67	-1.1
3,752,765	-		MIT1002_03354	0.71	-1.4
3,752,873	-				+1.2
3,752,877	+				+0.7
3,752,887	-				+0.2
3,753,106	-		MIT1002_03355	0.41	-0.9
3,753,170	-		MIT1002_03355	0.52	+0.8
3,753,224	+		MIT1002_03355	0.61	+0.6
3,753,288	-		MIT1002_03355	0.72	-1.8
3,753,430	+				+0.3
3,753,438	-				-0.3
3,753,463	+				+0.1
3,753,560	+				-1.4
3,753,598	+		MIT1002_03356	0.11	+0.3
3,753,672	+		MIT1002_03356	0.17	+0.6
3,753,723	+		MIT1002_03356	0.20	+0.7
3,753,751	-		MIT1002_03356	0.22	+0.5
3,753,822	-		MIT1002_03356	0.28	+1.1