Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03195

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
3,559,682	+		MIT1002_03194	0.70	+1.9
3,559,690	+		MIT1002_03194	0.71	-0.8
3,559,717	-		MIT1002_03194	0.72	-1.2
3,559,757	+		MIT1002_03194	0.73	-0.1
3,559,795	-		MIT1002_03194	0.75	-0.7
3,559,916	+		MIT1002_03194	0.79	-0.2
3,559,918	+		MIT1002_03194	0.79	-1.4
3,559,920	+		MIT1002_03194	0.79	+0.1
3,559,962	+		MIT1002_03194	0.81	-4.3
3,559,992	+		MIT1002_03194	0.82	-1.0
3,559,992	+		MIT1002_03194	0.82	-0.7
3,559,992	+		MIT1002_03194	0.82	-0.2
3,560,000	-		MIT1002_03194	0.82	-1.5
3,560,000	-		MIT1002_03194	0.82	-1.0
3,560,034	+		MIT1002_03194	0.84	-0.2
3,560,095	-		MIT1002_03194	0.86	+0.1
3,560,162	+		MIT1002_03194	0.88	+0.2
3,560,235	-				-3.7
3,560,262	-				-1.6
3,560,276	+				-0.6
3,560,284	-				-0.7
3,560,284	-				-0.8
3,560,284	-				-0.2
3,560,284	-				+1.3
3,560,284	-				+0.1
3,560,298	-				-0.6
3,560,391	-				+0.3
3,560,408	-				-0.7
3,560,460	+				+1.8
3,560,467	+				-0.2
3,560,467	+				+0.0
3,560,467	+				-0.1
3,560,475	-				-0.2
3,560,476	-				-0.2
3,560,515	+				-0.5
3,560,525	-				-2.5
3,560,533	+				-1.3
3,560,582	-				+0.6
3,560,582	-				-4.2
3,563,383	-				-0.7
3,563,680	-		MIT1002_03196	0.74	+0.1
3,563,803	-				+1.6
3,563,810	-				+0.3
3,563,878	-				-2.9
3,563,914	-				-1.7
3,563,929	-				-0.6
3,563,973	-		MIT1002_03197	0.11	-1.4
3,564,129	-		MIT1002_03197	0.21	-0.3
3,564,129	-		MIT1002_03197	0.21	-0.2
3,564,149	-		MIT1002_03197	0.23	+2.2