Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02857

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
3,170,566	-				-0.2
3,170,586	-				+1.4
3,170,779	-		MIT1002_02856	0.27	+0.8
3,170,825	+		MIT1002_02856	0.31	+0.4
3,170,861	-		MIT1002_02856	0.35	-0.6
3,170,923	+		MIT1002_02856	0.41	+0.4
3,170,936	-		MIT1002_02856	0.42	+0.7
3,170,936	-		MIT1002_02856	0.42	-0.4
3,170,951	+		MIT1002_02856	0.44	+0.9
3,171,010	-		MIT1002_02856	0.49	+1.0
3,171,029	+		MIT1002_02856	0.51	-1.4
3,171,108	-		MIT1002_02856	0.59	+1.5
3,171,113	-		MIT1002_02856	0.59	-0.5
3,171,128	+		MIT1002_02856	0.61	+0.9
3,171,130	+		MIT1002_02856	0.61	-0.7
3,171,164	+		MIT1002_02856	0.64	+1.2
3,171,199	+		MIT1002_02856	0.68	-1.5
3,171,213	-		MIT1002_02856	0.69	+1.9
3,171,216	-		MIT1002_02856	0.69	+2.6
3,171,247	-		MIT1002_02856	0.73	-1.9
3,171,287	-		MIT1002_02856	0.76	+0.8
3,171,293	-		MIT1002_02856	0.77	+0.2
3,171,330	+		MIT1002_02856	0.81	-2.9
3,171,338	-		MIT1002_02856	0.81	+0.7
3,171,386	+		MIT1002_02856	0.86	-0.2
3,171,391	+		MIT1002_02856	0.87	-0.2
3,171,391	+		MIT1002_02856	0.87	-0.6
3,171,391	+		MIT1002_02856	0.87	+0.6
3,171,391	+		MIT1002_02856	0.87	-0.6
3,171,391	+		MIT1002_02856	0.87	-0.4
3,171,391	+		MIT1002_02856	0.87	-1.2
3,171,399	-		MIT1002_02856	0.87	-0.0
3,171,399	-		MIT1002_02856	0.87	-0.8
3,171,399	-		MIT1002_02856	0.87	-0.9
3,171,401	+		MIT1002_02856	0.88	+0.3
3,171,401	+		MIT1002_02856	0.88	-2.0
3,171,419	-		MIT1002_02856	0.89	+0.1
3,171,419	-		MIT1002_02856	0.89	+0.4
3,171,437	-				+0.3
3,171,465	+				+0.3
3,171,545	+				-0.8
3,171,688	+		MIT1002_02857	0.16	+0.3
3,171,742	+		MIT1002_02857	0.22	+0.1
3,171,756	-		MIT1002_02857	0.24	+2.9
3,171,773	+		MIT1002_02857	0.26	-0.7
3,171,781	-		MIT1002_02857	0.27	+1.1
3,171,829	+		MIT1002_02857	0.32	+1.6
3,171,846	+		MIT1002_02857	0.34	+1.3
3,171,847	+		MIT1002_02857	0.34	-1.4
3,171,854	-		MIT1002_02857	0.35	+0.6
3,171,865	+		MIT1002_02857	0.36	+1.0
3,171,888	-		MIT1002_02857	0.39	-0.2
3,171,896	-		MIT1002_02857	0.40	+0.1
3,171,981	-		MIT1002_02857	0.49	-0.2
3,172,041	+		MIT1002_02857	0.56	-0.8
3,172,096	-		MIT1002_02857	0.62	+0.7
3,172,208	-		MIT1002_02857	0.75	-0.4
3,172,248	-		MIT1002_02857	0.80	+0.7
3,172,305	-		MIT1002_02857	0.86	-0.1
3,172,340	-				+1.2
3,172,450	-				+2.6
3,172,536	+		MIT1002_02858	0.16	+0.4
3,172,536	+		MIT1002_02858	0.16	-1.8
3,172,536	+		MIT1002_02858	0.16	-0.4
3,172,536	+		MIT1002_02858	0.16	-3.0
3,172,538	-		MIT1002_02858	0.17	-0.2
3,172,544	-		MIT1002_02858	0.17	-0.7
3,172,544	-		MIT1002_02858	0.17	-0.5
3,172,546	+		MIT1002_02858	0.18	+2.3
3,172,554	-		MIT1002_02858	0.19	+1.6
3,172,567	+		MIT1002_02858	0.21	-0.3
3,172,637	-		MIT1002_02858	0.30	+0.4
3,172,642	-		MIT1002_02858	0.31	-0.4
3,172,642	-		MIT1002_02858	0.31	-0.1
3,172,649	+		MIT1002_02858	0.32	-1.7
3,172,729	+		MIT1002_02858	0.42	+2.9
3,172,808	+		MIT1002_02858	0.53	-0.9
3,172,826	-		MIT1002_02858	0.55	-1.9
3,172,840	+		MIT1002_02858	0.57	+0.1
3,172,891	+		MIT1002_02858	0.64	-1.3
3,172,946	+		MIT1002_02858	0.72	-0.0
3,172,988	-		MIT1002_02858	0.77	+2.3
3,173,100	+				-0.4
3,173,229	-				+0.5
3,173,359	+				-0.9
3,173,367	-				-2.2
3,173,380	-				-2.6