Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02650

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
2,945,858	+				+0.8
2,945,903	-				+1.3
2,945,946	+				+0.4
2,945,946	+				+0.9
2,945,946	+				-0.2
2,945,954	-				-2.0
2,945,954	-				+0.9
2,945,954	-				-1.3
2,945,954	-				-1.1
2,945,987	-				-1.3
2,946,045	-		MIT1002_02649	0.16	+1.1
2,946,096	-		MIT1002_02649	0.24	-0.2
2,946,166	+		MIT1002_02649	0.36	-0.4
2,946,170	+		MIT1002_02649	0.37	-1.9
2,946,234	+		MIT1002_02649	0.47	+0.9
2,946,248	+		MIT1002_02649	0.50	+0.5
2,946,250	+		MIT1002_02649	0.50	-0.0
2,946,325	+		MIT1002_02649	0.63	+0.7
2,946,372	-		MIT1002_02649	0.70	-1.1
2,946,372	-		MIT1002_02649	0.70	+0.6
2,946,372	-		MIT1002_02649	0.70	-2.0
2,946,403	-		MIT1002_02649	0.76	+1.0
2,946,407	+		MIT1002_02649	0.76	-0.9
2,946,413	-		MIT1002_02649	0.77	-1.1
2,946,445	+		MIT1002_02649	0.83	-3.1
2,946,463	+		MIT1002_02649	0.86	-0.4
2,946,471	-		MIT1002_02649	0.87	+0.5
2,946,488	-		MIT1002_02649	0.90	-1.1
2,946,661	-		MIT1002_02650	0.11	-0.1
2,946,670	-		MIT1002_02650	0.12	+0.3
2,946,670	-		MIT1002_02650	0.12	+0.8
2,946,767	-		MIT1002_02650	0.22	-2.0
2,946,826	+		MIT1002_02650	0.29	-2.1
2,946,826	+		MIT1002_02650	0.29	+0.2
2,946,826	+		MIT1002_02650	0.29	-0.8
2,946,835	+		MIT1002_02650	0.30	+0.8
2,946,843	-		MIT1002_02650	0.30	+0.0
2,946,843	-		MIT1002_02650	0.30	-0.9
2,946,853	-		MIT1002_02650	0.32	+0.7
2,946,856	+		MIT1002_02650	0.32	-0.5
2,946,936	+		MIT1002_02650	0.40	+0.0
2,946,945	+		MIT1002_02650	0.41	+0.4
2,947,003	+		MIT1002_02650	0.47	-1.8
2,947,008	+		MIT1002_02650	0.48	+1.1
2,947,008	+		MIT1002_02650	0.48	-0.1
2,947,011	-		MIT1002_02650	0.48	-0.8
2,947,026	-		MIT1002_02650	0.50	-0.1
2,947,161	-		MIT1002_02650	0.64	-0.3
2,947,225	-		MIT1002_02650	0.71	+0.2
2,947,333	-		MIT1002_02650	0.82	-0.8
2,947,335	+		MIT1002_02650	0.82	-0.9
2,947,384	+		MIT1002_02650	0.88	-0.0
2,947,459	+				-0.3
2,947,489	-				+0.4
2,947,503	+				-0.1
2,947,511	-				-2.4
2,947,645	-				+1.5
2,947,696	+				+0.9
2,947,696	+				-1.0
2,947,704	-				+0.8
2,947,704	-				-0.4
2,947,707	+				+0.8
2,947,707	-				-1.0
2,947,743	-				-0.7
2,947,754	-				-1.0
2,947,830	+		MIT1002_02651	0.12	-0.2
2,947,885	-		MIT1002_02651	0.20	-0.6
2,947,993	-		MIT1002_02651	0.35	+0.4
2,948,003	-		MIT1002_02651	0.36	+0.4
2,948,003	-		MIT1002_02651	0.36	-0.5
2,948,015	+		MIT1002_02651	0.38	+0.3
2,948,015	+		MIT1002_02651	0.38	+0.3
2,948,060	+		MIT1002_02651	0.44	-0.5
2,948,060	+		MIT1002_02651	0.44	-0.3
2,948,060	+		MIT1002_02651	0.44	+1.4
2,948,060	+		MIT1002_02651	0.44	-0.9
2,948,060	+		MIT1002_02651	0.44	+0.9
2,948,065	+		MIT1002_02651	0.45	-0.1
2,948,066	-		MIT1002_02651	0.45	-2.4
2,948,068	-		MIT1002_02651	0.45	+0.6
2,948,075	+		MIT1002_02651	0.46	+0.9
2,948,075	+		MIT1002_02651	0.46	+0.0
2,948,075	+		MIT1002_02651	0.46	-1.3
2,948,078	-		MIT1002_02651	0.46	+1.2
2,948,083	-		MIT1002_02651	0.47	-0.6
2,948,083	-		MIT1002_02651	0.47	+0.1
2,948,083	-		MIT1002_02651	0.47	+1.2
2,948,083	-		MIT1002_02651	0.47	+0.8
2,948,091	-		MIT1002_02651	0.48	-1.6
2,948,117	-		MIT1002_02651	0.52	-1.3
2,948,145	+		MIT1002_02651	0.56	-1.8
2,948,148	-		MIT1002_02651	0.56	-1.8
2,948,158	-		MIT1002_02651	0.57	-0.1
2,948,218	+		MIT1002_02651	0.66	-0.2
2,948,218	-		MIT1002_02651	0.66	-0.4
2,948,311	-		MIT1002_02651	0.79	-1.5
2,948,323	-		MIT1002_02651	0.80	+1.0
2,948,323	-		MIT1002_02651	0.80	+1.9