Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02469

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
2,759,956	+		MIT1002_02466	0.72	+0.3
2,759,959	-		MIT1002_02466	0.72	-2.2
2,759,964	-		MIT1002_02466	0.72	-1.1
2,759,986	+		MIT1002_02466	0.74	-0.7
2,760,148	+		MIT1002_02466	0.86	+1.1
2,760,154	-		MIT1002_02466	0.86	-0.2
2,760,156	-		MIT1002_02466	0.86	+1.9
2,760,185	+		MIT1002_02466	0.89	-0.3
2,760,185	+		MIT1002_02466	0.89	+0.5
2,760,214	+				+1.0
2,760,217	-				+0.2
2,760,222	-				-0.5
2,760,222	-				-2.1
2,760,222	-				+0.2
2,760,222	-				+0.3
2,760,252	-				+1.1
2,760,297	-				+1.2
2,760,332	+				+0.7
2,760,360	+				-0.6
2,760,360	+				-0.7
2,760,360	+				-1.0
2,760,360	+				+0.5
2,760,360	+				-0.9
2,760,360	+				-2.4
2,760,360	+				+0.8
2,760,360	+				+0.2
2,760,368	-				-0.2
2,760,368	-				-0.7
2,760,368	-				-0.0
2,760,416	+				+1.2
2,760,439	+				-1.2
2,760,507	+		MIT1002_02467	0.20	+2.5
2,760,562	+		MIT1002_02467	0.64	+0.1
2,760,588	-				-0.7
2,760,590	+				-1.2
2,760,590	+				+2.8
2,760,598	-				-0.8
2,760,598	-				+0.3
2,760,598	-				-1.5
2,760,598	-				-0.3
2,760,623	+		MIT1002_02468	0.19	+0.3
2,760,631	-		MIT1002_02468	0.22	+1.9
2,760,661	-		MIT1002_02468	0.34	+1.1
2,760,677	-		MIT1002_02468	0.40	-1.5
2,760,703	-		MIT1002_02468	0.49	+0.2
2,760,832	+				-1.5
2,760,880	-				+1.6
2,760,970	-				-0.1
2,760,970	-				+0.4
2,761,033	-		MIT1002_02469	0.14	+0.2
2,761,153	+		MIT1002_02469	0.28	-0.4
2,761,153	+		MIT1002_02469	0.28	+1.4
2,761,153	+		MIT1002_02469	0.28	-1.8
2,761,161	-		MIT1002_02469	0.29	-2.4
2,761,161	-		MIT1002_02469	0.29	-1.0
2,761,161	-		MIT1002_02469	0.29	+2.2
2,761,161	-		MIT1002_02469	0.29	-0.8
2,761,161	-		MIT1002_02469	0.29	-1.3
2,761,166	-		MIT1002_02469	0.30	-0.6
2,761,166	-		MIT1002_02469	0.30	+1.2
2,761,166	-		MIT1002_02469	0.30	+0.5
2,761,166	-		MIT1002_02469	0.30	+1.4
2,761,245	-		MIT1002_02469	0.40	-0.4
2,761,289	+		MIT1002_02469	0.45	+1.7
2,761,289	+		MIT1002_02469	0.45	+0.7
2,761,291	-		MIT1002_02469	0.45	-1.2
2,761,292	-		MIT1002_02469	0.46	-1.3
2,761,336	-		MIT1002_02469	0.51	-0.8
2,761,356	-		MIT1002_02469	0.53	+0.2
2,761,366	+		MIT1002_02469	0.55	-0.3
2,761,369	-		MIT1002_02469	0.55	+1.3
2,761,440	-		MIT1002_02469	0.64	+0.1
2,761,631	+		MIT1002_02469	0.87	+0.5
2,761,742	+				-2.3
2,761,742	+				+1.0
2,761,747	+				+0.5
2,761,759	-				+0.1
2,761,766	+				+0.4
2,761,766	+				-4.2
2,761,842	+		MIT1002_02470	0.13	-2.4
2,761,842	+		MIT1002_02470	0.13	-0.4
2,761,854	+		MIT1002_02470	0.16	-0.9
2,761,862	-		MIT1002_02470	0.18	+0.7
2,761,899	-		MIT1002_02470	0.26	-0.1
2,761,911	-		MIT1002_02470	0.28	+1.1
2,761,956	+		MIT1002_02470	0.38	-0.4
2,761,966	-		MIT1002_02470	0.41	-0.3
2,762,020	+		MIT1002_02470	0.53	+0.2
2,762,020	+		MIT1002_02470	0.53	-0.8
2,762,024	-		MIT1002_02470	0.54	-0.3
2,762,028	-		MIT1002_02470	0.54	-2.7
2,762,028	-		MIT1002_02470	0.54	-3.3
2,762,028	-		MIT1002_02470	0.54	-2.2
2,762,028	-		MIT1002_02470	0.54	+0.8
2,762,028	-		MIT1002_02470	0.54	+0.6
2,762,053	+		MIT1002_02470	0.60	-1.9
2,762,053	+		MIT1002_02470	0.60	-1.1
2,762,053	+		MIT1002_02470	0.60	-0.0
2,762,061	-		MIT1002_02470	0.62	-3.0
2,762,078	+		MIT1002_02470	0.66	-2.1
2,762,110	+		MIT1002_02470	0.73	+0.4
2,762,110	+		MIT1002_02470	0.73	-0.9
2,762,118	-		MIT1002_02470	0.74	-1.3
2,762,118	-		MIT1002_02470	0.74	+0.5
2,762,120	-		MIT1002_02470	0.75	-0.0
2,762,154	-		MIT1002_02470	0.82	-0.9
2,762,287	+		MIT1002_02471	0.19	-1.7
2,762,398	-		MIT1002_02471	0.81	+2.3
2,762,409	+		MIT1002_02471	0.87	+0.6
2,762,409	+		MIT1002_02471	0.87	+0.1
2,762,455	-				-0.1
2,762,521	-				-1.1
2,762,544	-				+2.1
2,762,575	-		MIT1002_02472	0.10	-0.4
2,762,663	+		MIT1002_02472	0.21	-1.7
2,762,672	-		MIT1002_02472	0.22	+1.3
2,762,672	-		MIT1002_02472	0.22	-0.0
2,762,672	-		MIT1002_02472	0.22	-1.1
2,762,697	-		MIT1002_02472	0.25	-1.0