Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02464

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
2,754,838	-				+0.3
2,754,898	+		MIT1002_02463	0.12	+1.4
2,754,898	+		MIT1002_02463	0.12	+1.5
2,754,898	+		MIT1002_02463	0.12	-0.5
2,754,898	+		MIT1002_02463	0.12	-0.1
2,754,906	-		MIT1002_02463	0.14	-1.4
2,754,906	-		MIT1002_02463	0.14	-1.0
2,754,906	-		MIT1002_02463	0.14	+1.7
2,754,906	-		MIT1002_02463	0.14	+0.5
2,754,906	-		MIT1002_02463	0.14	+0.2
2,754,906	-		MIT1002_02463	0.14	-0.7
2,754,932	+		MIT1002_02463	0.18	+2.4
2,754,952	+		MIT1002_02463	0.21	-1.4
2,754,967	-		MIT1002_02463	0.23	-0.1
2,754,977	-		MIT1002_02463	0.24	-1.5
2,754,977	-		MIT1002_02463	0.24	+1.5
2,754,977	-		MIT1002_02463	0.24	+1.0
2,754,979	-		MIT1002_02463	0.25	+2.4
2,754,984	-		MIT1002_02463	0.25	+0.1
2,755,009	-		MIT1002_02463	0.29	-2.7
2,755,031	-		MIT1002_02463	0.32	-0.5
2,755,052	-		MIT1002_02463	0.35	-0.6
2,755,125	+		MIT1002_02463	0.46	+3.0
2,755,125	+		MIT1002_02463	0.46	-0.4
2,755,133	-		MIT1002_02463	0.47	+0.5
2,755,178	+		MIT1002_02463	0.54	+1.8
2,755,187	+		MIT1002_02463	0.56	+1.3
2,755,443	+				-1.2
2,755,443	+				-0.4
2,755,443	+				-0.0
2,755,451	-				+0.2
2,755,602	-				-0.3
2,755,602	-				+0.4
2,755,658	+				-0.0
2,755,668	-				-0.6
2,755,674	-				-2.3
2,755,717	+				-2.0
2,755,752	+				-0.3
2,755,774	+				+0.5
2,755,774	+				+2.4
2,755,774	+				-0.8
2,755,797	+				-0.5
2,755,805	-				-0.9
2,755,898	-		MIT1002_02464	0.12	-0.8
2,755,913	-		MIT1002_02464	0.13	+0.2
2,755,923	+		MIT1002_02464	0.14	+0.6
2,755,936	+		MIT1002_02464	0.15	+1.2
2,755,979	+		MIT1002_02464	0.18	-3.0
2,755,979	+		MIT1002_02464	0.18	+1.3
2,755,987	-		MIT1002_02464	0.18	-0.4
2,756,001	-		MIT1002_02464	0.19	-2.1
2,756,028	-		MIT1002_02464	0.21	-1.0
2,756,059	+		MIT1002_02464	0.23	+0.7
2,756,067	-		MIT1002_02464	0.23	-1.3
2,756,067	-		MIT1002_02464	0.23	+0.5
2,756,067	-		MIT1002_02464	0.23	+0.7
2,756,077	-		MIT1002_02464	0.24	-0.3
2,756,082	+		MIT1002_02464	0.24	-1.4
2,756,103	+		MIT1002_02464	0.26	+0.9
2,756,172	+		MIT1002_02464	0.30	+0.5
2,756,172	+		MIT1002_02464	0.30	-2.8
2,756,221	+		MIT1002_02464	0.34	-1.4
2,756,221	+		MIT1002_02464	0.34	-3.4
2,756,229	-		MIT1002_02464	0.34	-0.8
2,756,229	-		MIT1002_02464	0.34	-0.2
2,756,287	+		MIT1002_02464	0.38	-1.7
2,756,327	+		MIT1002_02464	0.41	+0.1
2,756,449	+		MIT1002_02464	0.49	+1.9
2,756,449	+		MIT1002_02464	0.49	+1.0
2,756,452	-		MIT1002_02464	0.49	+0.5
2,756,457	-		MIT1002_02464	0.49	-2.3
2,756,489	+		MIT1002_02464	0.51	+0.9
2,756,494	+		MIT1002_02464	0.52	+0.8
2,756,532	+		MIT1002_02464	0.54	-0.3
2,756,532	+		MIT1002_02464	0.54	+1.5
2,756,532	+		MIT1002_02464	0.54	+1.5
2,756,540	-		MIT1002_02464	0.55	+1.0
2,756,540	-		MIT1002_02464	0.55	+0.3
2,756,540	-		MIT1002_02464	0.55	+0.9
2,756,540	-		MIT1002_02464	0.55	-0.5
2,756,540	-		MIT1002_02464	0.55	+0.3
2,756,540	-		MIT1002_02464	0.55	-0.6
2,756,565	-		MIT1002_02464	0.57	+0.5
2,756,670	-		MIT1002_02464	0.64	-0.2
2,756,672	+		MIT1002_02464	0.64	+0.3
2,756,763	+		MIT1002_02464	0.70	-0.8
2,756,769	-		MIT1002_02464	0.70	-0.6
2,756,769	-		MIT1002_02464	0.70	-0.8
2,756,857	+		MIT1002_02464	0.76	+2.7
2,756,857	+		MIT1002_02464	0.76	-0.1
2,756,857	+		MIT1002_02464	0.76	+0.5
2,756,857	+		MIT1002_02464	0.76	-0.7
2,756,865	+		MIT1002_02464	0.77	+0.7
2,756,865	-		MIT1002_02464	0.77	-1.6
2,756,884	+		MIT1002_02464	0.78	+0.2
2,757,053	+		MIT1002_02464	0.89	+1.5
2,757,078	+				+0.8
2,757,116	+				+0.1
2,757,156	+				-0.5
2,757,181	+				-0.3
2,757,203	+				-1.8
2,757,268	+				-1.3
2,757,276	-				-0.1
2,757,322	-				-0.2
2,757,327	-				-0.1
2,757,375	-				+0.6
2,757,436	+				-1.3
2,757,436	+				-2.0
2,757,444	-				+0.2
2,757,616	+		MIT1002_02465	0.10	+1.2
2,757,778	+		MIT1002_02465	0.21	+1.2
2,757,785	-		MIT1002_02465	0.21	+2.2
2,757,786	-		MIT1002_02465	0.21	+0.3
2,757,808	+		MIT1002_02465	0.23	-0.3
2,757,810	+		MIT1002_02465	0.23	+2.1
2,757,898	-		MIT1002_02465	0.29	-0.2
2,757,917	+		MIT1002_02465	0.30	+0.2
2,757,925	-		MIT1002_02465	0.30	-2.2
2,757,928	+		MIT1002_02465	0.31	-1.7
2,757,938	+		MIT1002_02465	0.31	+0.6
2,758,009	+		MIT1002_02465	0.36	+0.5
2,758,012	-		MIT1002_02465	0.36	+0.7
2,758,022	+		MIT1002_02465	0.37	+0.2
2,758,022	+		MIT1002_02465	0.37	-0.9
2,758,022	+		MIT1002_02465	0.37	+0.5
2,758,030	-		MIT1002_02465	0.37	-0.9
2,758,030	-		MIT1002_02465	0.37	-2.8
2,758,032	+		MIT1002_02465	0.37	-0.0
2,758,032	+		MIT1002_02465	0.37	-2.0
2,758,040	-		MIT1002_02465	0.38	+1.2
2,758,046	+		MIT1002_02465	0.38	-1.7
2,758,078	+		MIT1002_02465	0.40	-0.5