Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02230

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
2,490,297	+		MIT1002_02229	0.20	-0.2
2,490,305	-		MIT1002_02229	0.20	-1.1
2,490,346	+		MIT1002_02229	0.24	+0.1
2,490,354	-		MIT1002_02229	0.24	-0.3
2,490,362	+		MIT1002_02229	0.25	+0.6
2,490,377	-		MIT1002_02229	0.26	+1.3
2,490,405	-		MIT1002_02229	0.28	+0.5
2,490,439	+		MIT1002_02229	0.31	+0.4
2,490,447	-		MIT1002_02229	0.32	-0.9
2,490,503	-		MIT1002_02229	0.36	-0.1
2,490,551	-		MIT1002_02229	0.40	+0.8
2,490,551	-		MIT1002_02229	0.40	-0.9
2,490,588	+		MIT1002_02229	0.43	-0.9
2,490,596	-		MIT1002_02229	0.44	-0.1
2,490,652	+		MIT1002_02229	0.49	+0.0
2,490,725	-		MIT1002_02229	0.54	-0.1
2,490,774	+		MIT1002_02229	0.58	-2.0
2,490,818	-		MIT1002_02229	0.62	+0.1
2,490,822	-		MIT1002_02229	0.62	-2.5
2,490,891	-		MIT1002_02229	0.68	-0.6
2,490,975	+		MIT1002_02229	0.75	+0.3
2,490,984	-		MIT1002_02229	0.76	-2.7
2,491,033	+		MIT1002_02229	0.80	+1.8
2,491,033	+		MIT1002_02229	0.80	-0.5
2,491,041	-		MIT1002_02229	0.80	+1.8
2,491,088	-		MIT1002_02229	0.84	+0.7
2,491,122	-		MIT1002_02229	0.87	-1.0
2,491,262	+				-0.5
2,491,262	-				-0.1
2,491,313	+				+0.9
2,491,314	+				-0.6
2,491,368	-				+0.5
2,491,453	-				+0.9
2,491,577	+		MIT1002_02230	0.17	+2.9
2,491,600	+		MIT1002_02230	0.18	-0.7
2,491,600	+		MIT1002_02230	0.18	+0.2
2,491,600	+		MIT1002_02230	0.18	-0.5
2,491,608	-		MIT1002_02230	0.18	-0.3
2,491,613	-		MIT1002_02230	0.19	+1.1
2,491,630	+		MIT1002_02230	0.20	-0.2
2,491,630	+		MIT1002_02230	0.20	+2.0
2,491,638	-		MIT1002_02230	0.20	-0.8
2,491,638	-		MIT1002_02230	0.20	-1.1
2,491,638	-		MIT1002_02230	0.20	-1.4
2,491,647	+		MIT1002_02230	0.21	-0.4
2,491,655	-		MIT1002_02230	0.21	+2.5
2,491,685	+		MIT1002_02230	0.23	+0.7
2,491,685	+		MIT1002_02230	0.23	-0.2
2,491,782	-		MIT1002_02230	0.28	-3.1
2,491,881	-		MIT1002_02230	0.34	-2.3
2,491,930	+		MIT1002_02230	0.37	+2.3
2,491,975	-		MIT1002_02230	0.39	+2.2
2,492,070	+		MIT1002_02230	0.45	+0.0
2,492,101	-		MIT1002_02230	0.46	-2.5
2,492,139	+		MIT1002_02230	0.49	-0.7
2,492,192	-		MIT1002_02230	0.52	-0.4
2,492,193	+		MIT1002_02230	0.52	-0.3
2,492,291	+		MIT1002_02230	0.57	-1.0
2,492,291	+		MIT1002_02230	0.57	+0.8
2,492,294	-		MIT1002_02230	0.57	+2.5
2,492,299	-		MIT1002_02230	0.58	-0.3
2,492,308	-		MIT1002_02230	0.58	+0.2
2,492,313	-		MIT1002_02230	0.58	+2.2
2,492,332	+		MIT1002_02230	0.60	-0.3
2,492,385	+		MIT1002_02230	0.63	+0.4
2,492,405	-		MIT1002_02230	0.64	+2.5
2,492,416	+		MIT1002_02230	0.64	+1.1
2,492,418	+		MIT1002_02230	0.64	+0.6
2,492,426	-		MIT1002_02230	0.65	-1.8
2,492,439	-		MIT1002_02230	0.66	+1.5
2,492,467	+		MIT1002_02230	0.67	+1.3
2,492,467	+		MIT1002_02230	0.67	-0.7
2,492,472	+		MIT1002_02230	0.68	+1.1
2,492,485	-		MIT1002_02230	0.68	+0.3
2,492,519	-		MIT1002_02230	0.70	+0.4
2,492,524	-		MIT1002_02230	0.70	-2.2
2,492,569	+		MIT1002_02230	0.73	-0.5
2,492,627	+		MIT1002_02230	0.76	-0.4
2,492,637	+		MIT1002_02230	0.77	-0.5
2,492,691	+		MIT1002_02230	0.80	+0.9
2,492,691	+		MIT1002_02230	0.80	-0.7
2,492,699	-		MIT1002_02230	0.80	-1.0
2,492,705	-		MIT1002_02230	0.81	-2.1
2,492,724	+		MIT1002_02230	0.82	-1.7
2,492,725	-		MIT1002_02230	0.82	-0.6
2,492,744	+		MIT1002_02230	0.83	+0.0
2,492,780	+		MIT1002_02230	0.85	+0.8
2,492,807	-		MIT1002_02230	0.87	+0.6
2,492,975	+				-0.3
2,493,089	+				-0.5
2,493,099	+				-1.9
2,493,099	+				+0.4
2,493,107	-				-1.3
2,493,189	-		MIT1002_02231	0.13	+0.5
2,493,195	+		MIT1002_02231	0.13	-2.3
2,493,226	+		MIT1002_02231	0.18	-2.3
2,493,258	-		MIT1002_02231	0.22	-1.2
2,493,273	-		MIT1002_02231	0.24	+0.8
2,493,273	-		MIT1002_02231	0.24	+1.2
2,493,277	+		MIT1002_02231	0.25	+1.5
2,493,341	+		MIT1002_02231	0.34	-0.8
2,493,349	-		MIT1002_02231	0.35	+1.1
2,493,349	-		MIT1002_02231	0.35	-1.8
2,493,410	+		MIT1002_02231	0.44	-3.6
2,493,413	+		MIT1002_02231	0.44	+0.5
2,493,415	+		MIT1002_02231	0.44	-0.0
2,493,420	+		MIT1002_02231	0.45	-0.3
2,493,421	-		MIT1002_02231	0.45	-0.2
2,493,423	-		MIT1002_02231	0.45	+0.2
2,493,432	+		MIT1002_02231	0.47	-1.0
2,493,468	+		MIT1002_02231	0.52	+0.2
2,493,478	-		MIT1002_02231	0.53	+0.4
2,493,609	+		MIT1002_02231	0.71	-0.3
2,493,641	+		MIT1002_02231	0.76	+0.7
2,493,649	+		MIT1002_02231	0.77	+0.9
2,493,649	+		MIT1002_02231	0.77	-0.1
2,493,649	+		MIT1002_02231	0.77	+0.4
2,493,649	+		MIT1002_02231	0.77	+1.6
2,493,655	-		MIT1002_02231	0.78	-1.3
2,493,657	-		MIT1002_02231	0.78	-0.1
2,493,657	-		MIT1002_02231	0.78	+0.5
2,493,657	-		MIT1002_02231	0.78	-1.4
2,493,717	-		MIT1002_02231	0.87	+2.0
2,493,726	+		MIT1002_02231	0.88	-0.0
2,493,746	-				+0.6
2,493,981	+				-1.9
2,493,993	+				+1.3
2,493,993	+				-1.4
2,493,993	+				-2.8
2,494,001	-				-2.1