Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02228

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
2,488,239	+				-0.7
2,488,298	-				-1.5
2,488,424	+				+0.4
2,488,524	-		MIT1002_02227	0.18	+0.7
2,488,586	+		MIT1002_02227	0.25	-0.8
2,488,649	-		MIT1002_02227	0.32	-0.1
2,488,798	-		MIT1002_02227	0.49	+0.3
2,488,896	+		MIT1002_02227	0.61	-2.3
2,488,913	+		MIT1002_02227	0.63	-1.9
2,488,952	-		MIT1002_02227	0.67	-0.0
2,488,990	+		MIT1002_02227	0.71	-2.4
2,489,053	+		MIT1002_02227	0.79	-1.1
2,489,283	+				-0.9
2,489,283	-				-1.8
2,489,291	-				-1.4
2,489,297	-				-1.0
2,489,463	-		MIT1002_02228	0.28	-1.3
2,489,463	-		MIT1002_02228	0.28	+0.4
2,489,490	+		MIT1002_02228	0.31	+2.5
2,489,630	+		MIT1002_02228	0.49	-2.3
2,489,630	+		MIT1002_02228	0.49	-2.1
2,489,635	+		MIT1002_02228	0.49	-0.1
2,489,638	-		MIT1002_02228	0.50	+0.9
2,489,638	-		MIT1002_02228	0.50	-1.6
2,489,697	+		MIT1002_02228	0.57	+0.4
2,489,705	-		MIT1002_02228	0.58	-0.8
2,489,758	-		MIT1002_02228	0.64	-2.6
2,489,814	-		MIT1002_02228	0.71	-0.8
2,489,867	+		MIT1002_02228	0.78	+1.1
2,489,875	-		MIT1002_02228	0.79	+0.1
2,489,875	-		MIT1002_02228	0.79	-0.3
2,489,912	-		MIT1002_02228	0.83	+0.1
2,489,977	+				+0.5
2,489,985	-				+1.1
2,489,989	+				-0.9
2,489,998	-				+0.7
2,489,999	+				-1.3
2,490,049	+				-1.0
2,490,271	+		MIT1002_02229	0.17	+0.0
2,490,297	+		MIT1002_02229	0.20	-0.2
2,490,305	-		MIT1002_02229	0.20	-1.1
2,490,346	+		MIT1002_02229	0.24	+0.1
2,490,354	-		MIT1002_02229	0.24	-0.3
2,490,362	+		MIT1002_02229	0.25	+0.6
2,490,377	-		MIT1002_02229	0.26	+1.3
2,490,405	-		MIT1002_02229	0.28	+0.5
2,490,439	+		MIT1002_02229	0.31	+0.4
2,490,447	-		MIT1002_02229	0.32	-0.9
2,490,503	-		MIT1002_02229	0.36	-0.1
2,490,551	-		MIT1002_02229	0.40	+0.8
2,490,551	-		MIT1002_02229	0.40	-0.9
2,490,588	+		MIT1002_02229	0.43	-0.9
2,490,596	-		MIT1002_02229	0.44	-0.1
2,490,652	+		MIT1002_02229	0.49	+0.0
2,490,725	-		MIT1002_02229	0.54	-0.1
2,490,774	+		MIT1002_02229	0.58	-2.0
2,490,818	-		MIT1002_02229	0.62	+0.1
2,490,822	-		MIT1002_02229	0.62	-2.5
2,490,891	-		MIT1002_02229	0.68	-0.6
2,490,975	+		MIT1002_02229	0.75	+0.3
2,490,984	-		MIT1002_02229	0.76	-2.7
2,491,033	+		MIT1002_02229	0.80	+1.8
2,491,033	+		MIT1002_02229	0.80	-0.5
2,491,041	-		MIT1002_02229	0.80	+1.8