Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01862

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
2,073,529	-				-0.8
2,073,529	-				+0.4
2,073,540	-				+0.2
2,073,548	+				+0.3
2,073,562	-				+0.5
2,073,562	-				-0.3
2,073,570	-				+1.1
2,073,572	-				-2.7
2,073,675	+				-1.2
2,073,697	-				-0.9
2,073,708	+				+0.6
2,073,780	+		MIT1002_01861	0.10	+1.4
2,073,795	+		MIT1002_01861	0.13	+0.4
2,073,803	-		MIT1002_01861	0.14	-0.1
2,073,826	+		MIT1002_01861	0.17	-0.2
2,073,828	-		MIT1002_01861	0.17	+0.4
2,073,872	+		MIT1002_01861	0.24	-1.3
2,073,877	+		MIT1002_01861	0.24	-1.8
2,073,884	+		MIT1002_01861	0.25	+1.1
2,073,894	-		MIT1002_01861	0.27	-0.3
2,073,953	+		MIT1002_01861	0.35	-1.2
2,073,962	+		MIT1002_01861	0.36	-0.2
2,073,975	-		MIT1002_01861	0.38	+2.5
2,074,158	+		MIT1002_01861	0.64	-1.3
2,074,177	+		MIT1002_01861	0.67	-0.9
2,074,259	+		MIT1002_01861	0.78	+0.8
2,074,261	-		MIT1002_01861	0.79	+0.1
2,074,267	-		MIT1002_01861	0.80	-0.3
2,074,267	-		MIT1002_01861	0.80	+1.9
2,074,311	+		MIT1002_01861	0.86	-0.4
2,074,492	+				+0.7
2,074,618	-		MIT1002_01862	0.17	-1.0
2,074,683	-		MIT1002_01862	0.25	-1.7
2,074,694	-		MIT1002_01862	0.26	-2.1
2,074,734	+		MIT1002_01862	0.32	-0.5
2,074,740	+		MIT1002_01862	0.32	+0.0
2,074,741	+		MIT1002_01862	0.32	+0.9
2,074,797	-		MIT1002_01862	0.40	-1.6
2,074,820	+		MIT1002_01862	0.43	+0.7
2,074,828	-		MIT1002_01862	0.44	+0.0
2,074,907	-		MIT1002_01862	0.54	-0.1
2,074,907	-		MIT1002_01862	0.54	-0.3
2,074,907	-		MIT1002_01862	0.54	-1.2
2,074,907	-		MIT1002_01862	0.54	-1.1
2,075,058	-		MIT1002_01862	0.73	+0.1
2,075,138	+		MIT1002_01862	0.84	-0.0
2,075,166	+		MIT1002_01862	0.87	-0.2
2,075,206	+				-0.5
2,075,440	+		MIT1002_01863	0.24	+0.5
2,075,536	+		MIT1002_01863	0.57	+1.5
2,075,605	+		MIT1002_01863	0.80	+0.1
2,075,617	+		MIT1002_01863	0.84	-2.1
2,075,625	-		MIT1002_01863	0.87	-1.3
2,075,625	-		MIT1002_01863	0.87	+1.3
2,075,708	+				+0.4
2,075,750	+				+0.9
2,075,793	-				+1.0
2,075,928	+		MIT1002_01864	0.27	-1.1
2,075,936	-		MIT1002_01864	0.28	-0.9
2,075,941	+		MIT1002_01864	0.29	+0.3
2,075,941	-		MIT1002_01864	0.29	-1.1
2,076,082	+		MIT1002_01864	0.51	+0.1
2,076,090	-		MIT1002_01864	0.53	+0.1
2,076,148	-		MIT1002_01864	0.62	-0.5
2,076,176	+		MIT1002_01864	0.66	+0.5
2,076,176	+		MIT1002_01864	0.66	+0.9
2,076,241	+		MIT1002_01864	0.77	+1.8
2,076,260	-		MIT1002_01864	0.80	-0.5