Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01593

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
1,753,952	+		MIT1002_01592	0.25	-0.2
1,753,961	-		MIT1002_01592	0.26	+0.8
1,753,975	-		MIT1002_01592	0.27	-1.0
1,754,001	+		MIT1002_01592	0.29	-2.0
1,754,024	+		MIT1002_01592	0.31	-0.2
1,754,024	+		MIT1002_01592	0.31	-2.1
1,754,032	-		MIT1002_01592	0.31	+0.1
1,754,064	+		MIT1002_01592	0.34	-0.3
1,754,067	+		MIT1002_01592	0.34	-1.5
1,754,067	+		MIT1002_01592	0.34	-3.7
1,754,286	+		MIT1002_01592	0.51	-0.4
1,754,289	-		MIT1002_01592	0.52	+0.6
1,754,291	-		MIT1002_01592	0.52	-1.5
1,754,305	+		MIT1002_01592	0.53	-0.2
1,754,307	-		MIT1002_01592	0.53	+0.8
1,754,311	-		MIT1002_01592	0.53	-2.3
1,754,458	-		MIT1002_01592	0.65	-2.5
1,754,511	+		MIT1002_01592	0.69	+0.1
1,754,514	-		MIT1002_01592	0.69	+0.3
1,754,514	-		MIT1002_01592	0.69	-1.0
1,754,519	-		MIT1002_01592	0.70	-0.0
1,754,519	-		MIT1002_01592	0.70	-0.8
1,754,536	+		MIT1002_01592	0.71	-1.4
1,754,536	+		MIT1002_01592	0.71	-0.1
1,754,536	+		MIT1002_01592	0.71	-0.5
1,754,590	+		MIT1002_01592	0.75	-0.4
1,754,640	-		MIT1002_01592	0.79	+0.2
1,754,645	+		MIT1002_01592	0.80	-0.2
1,754,645	+		MIT1002_01592	0.80	-0.5
1,754,774	-		MIT1002_01592	0.90	+1.2
1,754,799	+				+0.3
1,754,900	+				+0.7
1,754,908	-				-0.2
1,754,945	-				+0.2
1,754,955	-				-1.0
1,754,960	-				-0.4
1,755,047	-		MIT1002_01593	0.16	-0.9
1,755,052	-		MIT1002_01593	0.17	-0.8
1,755,086	-		MIT1002_01593	0.21	-2.3
1,755,086	-		MIT1002_01593	0.21	-0.4
1,755,172	+		MIT1002_01593	0.32	+0.2
1,755,191	+		MIT1002_01593	0.34	+0.8
1,755,233	-		MIT1002_01593	0.39	-1.0
1,755,259	-		MIT1002_01593	0.42	+1.4
1,755,259	-		MIT1002_01593	0.42	-0.6
1,755,303	+		MIT1002_01593	0.48	-0.8
1,755,303	+		MIT1002_01593	0.48	-0.4
1,755,303	+		MIT1002_01593	0.48	-1.9
1,755,311	-		MIT1002_01593	0.49	-0.9
1,755,313	+		MIT1002_01593	0.49	-0.0
1,755,321	-		MIT1002_01593	0.50	-2.8
1,755,321	-		MIT1002_01593	0.50	-3.1
1,755,363	+		MIT1002_01593	0.55	+1.0
1,755,371	-		MIT1002_01593	0.56	+0.2
1,755,373	+		MIT1002_01593	0.56	+0.2
1,755,381	-		MIT1002_01593	0.57	+0.2
1,755,455	+		MIT1002_01593	0.66	-0.6
1,755,471	-		MIT1002_01593	0.68	-0.7
1,755,490	+		MIT1002_01593	0.70	-1.1
1,755,492	-		MIT1002_01593	0.71	-1.9
1,755,492	-		MIT1002_01593	0.71	+0.6
1,755,503	-		MIT1002_01593	0.72	-0.6
1,755,509	+		MIT1002_01593	0.73	-1.3
1,755,517	-		MIT1002_01593	0.74	-0.8
1,755,559	+		MIT1002_01593	0.79	-0.9
1,755,745	+				-0.2
1,755,791	-				+0.3
1,755,791	-				+1.0
1,755,820	-				-0.6
1,755,820	-				+0.2
1,755,843	-				+0.6
1,755,917	+				+0.4
1,755,925	-				+0.6
1,755,954	+				-2.7
1,755,988	+		MIT1002_01594	0.12	+0.8
1,755,996	-		MIT1002_01594	0.12	-1.8
1,756,105	-		MIT1002_01594	0.19	-3.3
1,756,112	-		MIT1002_01594	0.20	+1.6
1,756,140	-		MIT1002_01594	0.21	-0.5
1,756,204	-		MIT1002_01594	0.25	-1.8
1,756,260	+		MIT1002_01594	0.29	-1.9
1,756,287	+		MIT1002_01594	0.31	-1.8
1,756,287	+		MIT1002_01594	0.31	-0.7
1,756,287	+		MIT1002_01594	0.31	-0.9
1,756,295	-		MIT1002_01594	0.31	+1.0
1,756,295	-		MIT1002_01594	0.31	+1.8
1,756,295	-		MIT1002_01594	0.31	-0.2
1,756,319	+		MIT1002_01594	0.33	-2.9
1,756,322	+		MIT1002_01594	0.33	-1.8
1,756,322	+		MIT1002_01594	0.33	+0.9
1,756,322	+		MIT1002_01594	0.33	-0.4
1,756,322	+		MIT1002_01594	0.33	-1.8
1,756,330	-		MIT1002_01594	0.33	-1.5
1,756,330	-		MIT1002_01594	0.33	+1.0
1,756,330	-		MIT1002_01594	0.33	-1.0
1,756,330	-		MIT1002_01594	0.33	+0.7
1,756,362	+		MIT1002_01594	0.35	-0.0
1,756,406	+		MIT1002_01594	0.38	+0.9
1,756,448	-		MIT1002_01594	0.41	+1.5
1,756,573	-		MIT1002_01594	0.49	-2.8
1,756,581	+		MIT1002_01594	0.49	-2.3
1,756,589	-		MIT1002_01594	0.50	+0.7
1,756,619	+		MIT1002_01594	0.52	-0.6
1,756,619	+		MIT1002_01594	0.52	-1.3
1,756,627	+		MIT1002_01594	0.52	-2.1