Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01181

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
1,294,552	+		MIT1002_01180	0.11	+1.0
1,294,552	+		MIT1002_01180	0.11	-0.5
1,294,594	+		MIT1002_01180	0.16	+0.2
1,294,643	+		MIT1002_01180	0.21	+0.5
1,294,643	+		MIT1002_01180	0.21	-2.3
1,294,643	+		MIT1002_01180	0.21	-1.2
1,294,651	-		MIT1002_01180	0.22	+1.2
1,294,651	-		MIT1002_01180	0.22	+0.2
1,294,666	+		MIT1002_01180	0.24	+1.3
1,294,749	-		MIT1002_01180	0.33	-1.1
1,294,867	-		MIT1002_01180	0.46	-1.4
1,294,872	+		MIT1002_01180	0.47	+0.9
1,294,893	-		MIT1002_01180	0.49	-2.4
1,294,893	-		MIT1002_01180	0.49	-2.7
1,294,893	-		MIT1002_01180	0.49	-0.1
1,294,942	+		MIT1002_01180	0.54	+1.5
1,295,170	+		MIT1002_01180	0.80	-0.4
1,295,201	+		MIT1002_01180	0.83	-1.5
1,295,206	+		MIT1002_01180	0.84	+0.9
1,295,206	+		MIT1002_01180	0.84	-0.6
1,295,218	+		MIT1002_01180	0.85	-1.0
1,295,263	-				+0.6
1,295,439	-				-2.1
1,295,463	+				-0.6
1,295,599	+				+2.2
1,295,626	-				-2.0
1,295,626	-				-0.1
1,295,648	+				+1.1
1,295,656	-				+0.1
1,295,677	+		MIT1002_01181	0.11	-0.4
1,295,768	-		MIT1002_01181	0.19	-0.9
1,295,855	-		MIT1002_01181	0.26	+0.4
1,295,925	-		MIT1002_01181	0.32	-0.5
1,295,945	+		MIT1002_01181	0.34	-0.8
1,295,953	-		MIT1002_01181	0.34	+2.9
1,295,975	+		MIT1002_01181	0.36	+1.1
1,295,993	+		MIT1002_01181	0.38	-1.1
1,296,040	+		MIT1002_01181	0.41	+0.8
1,296,053	+		MIT1002_01181	0.42	+0.2
1,296,135	-		MIT1002_01181	0.49	-0.3
1,296,141	-		MIT1002_01181	0.50	-0.2
1,296,151	-		MIT1002_01181	0.51	-0.5
1,296,170	+		MIT1002_01181	0.52	-0.5
1,296,251	+		MIT1002_01181	0.59	-1.4
1,296,258	+		MIT1002_01181	0.60	+0.6
1,296,271	+		MIT1002_01181	0.61	-0.6
1,296,401	-		MIT1002_01181	0.71	+1.2
1,296,405	+		MIT1002_01181	0.72	+0.3
1,296,437	-		MIT1002_01181	0.74	+0.0
1,296,478	+		MIT1002_01181	0.78	-0.9
1,296,481	-		MIT1002_01181	0.78	-1.3
1,296,486	-		MIT1002_01181	0.79	+0.0
1,296,486	-		MIT1002_01181	0.79	+3.2
1,296,512	-		MIT1002_01181	0.81	+0.9
1,296,536	+		MIT1002_01181	0.83	-0.7
1,296,536	+		MIT1002_01181	0.83	-1.8
1,296,544	-		MIT1002_01181	0.83	-2.1
1,296,551	+		MIT1002_01181	0.84	-3.1
1,296,576	+		MIT1002_01181	0.86	+1.1
1,296,594	-		MIT1002_01181	0.88	-0.4
1,296,599	-		MIT1002_01181	0.88	-0.3
1,296,599	-		MIT1002_01181	0.88	-3.2
1,296,614	-		MIT1002_01181	0.89	-2.6
1,296,684	+				-0.6
1,296,684	+				+0.9
1,296,684	+				+0.7
1,296,692	-				-0.2
1,296,700	+				-0.1
1,296,754	-				-2.0
1,296,802	+				+1.9
1,296,802	+				-2.5
1,296,802	+				+1.1
1,296,802	+				-1.5
1,296,802	+				+0.1
1,296,802	+				-2.5
1,296,802	+				+1.1
1,296,802	+				+3.1
1,296,810	-				+0.1
1,296,810	-				+0.5
1,296,810	-				+0.1
1,296,810	-				-0.2
1,296,810	-				-0.0
1,296,810	-				-1.4
1,296,810	-				-0.4
1,296,824	+				+1.7
1,296,975	+				+1.4
1,296,975	+				+0.3
1,296,975	+				-3.2
1,296,975	+				+2.1
1,296,977	+				+0.5
1,296,983	-				+0.2
1,297,074	+		MIT1002_01182	0.38	+0.3
1,297,076	+		MIT1002_01182	0.39	+0.1
1,297,081	-		MIT1002_01182	0.42	+0.5
1,297,103	+		MIT1002_01182	0.52	-0.8
1,297,252	+		MIT1002_01183	0.33	-1.7
1,297,252	+		MIT1002_01183	0.33	+1.2
1,297,296	+		MIT1002_01183	0.55	-0.3
1,297,337	-		MIT1002_01183	0.76	-0.3
1,297,402	-				+0.7
1,297,406	+				-0.8
1,297,414	-				-0.8
1,297,414	-				-1.6