Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01079

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
1,184,801	+		MIT1002_01078	0.16	-1.1
1,184,808	+		MIT1002_01078	0.17	-0.2
1,184,814	-		MIT1002_01078	0.17	-2.9
1,184,989	-		MIT1002_01078	0.32	+0.4
1,185,033	+		MIT1002_01078	0.36	+0.3
1,185,105	-		MIT1002_01078	0.42	-2.9
1,185,114	-		MIT1002_01078	0.42	-1.8
1,185,121	+		MIT1002_01078	0.43	-0.3
1,185,121	+		MIT1002_01078	0.43	+1.1
1,185,219	+		MIT1002_01078	0.51	-0.1
1,185,219	+		MIT1002_01078	0.51	-0.5
1,185,229	-		MIT1002_01078	0.52	-1.1
1,185,268	+		MIT1002_01078	0.55	+0.3
1,185,276	-		MIT1002_01078	0.56	+1.0
1,185,424	-		MIT1002_01078	0.68	+0.6
1,185,518	+		MIT1002_01078	0.76	-1.5
1,185,526	-		MIT1002_01078	0.77	+0.4
1,185,533	+		MIT1002_01078	0.77	-0.3
1,185,539	-		MIT1002_01078	0.78	+0.8
1,185,560	-		MIT1002_01078	0.80	+1.7
1,185,578	+		MIT1002_01078	0.81	+1.6
1,185,634	-		MIT1002_01078	0.86	-0.9
1,185,642	+		MIT1002_01078	0.87	+2.2
1,185,652	+		MIT1002_01078	0.87	+0.6
1,185,660	+		MIT1002_01078	0.88	+0.7
1,185,660	-		MIT1002_01078	0.88	+0.4
1,185,660	-		MIT1002_01078	0.88	+1.6
1,185,709	+				+0.5
1,185,803	-				-0.8
1,185,882	+				+0.7
1,185,893	+				+0.1
1,185,893	+				-0.5
1,185,901	-				+1.8
1,186,016	-		MIT1002_01079	0.20	-1.1
1,186,016	-		MIT1002_01079	0.20	-1.2
1,186,072	+		MIT1002_01079	0.25	-0.4
1,186,080	-		MIT1002_01079	0.26	-1.1
1,186,174	+		MIT1002_01079	0.35	+0.0
1,186,182	-		MIT1002_01079	0.36	+0.1
1,186,185	+		MIT1002_01079	0.36	-0.2
1,186,185	+		MIT1002_01079	0.36	+1.3
1,186,185	+		MIT1002_01079	0.36	-1.3
1,186,185	+		MIT1002_01079	0.36	-0.8
1,186,185	+		MIT1002_01079	0.36	-1.1
1,186,185	+		MIT1002_01079	0.36	-1.1
1,186,185	+		MIT1002_01079	0.36	+1.7
1,186,185	+		MIT1002_01079	0.36	+2.7
1,186,193	-		MIT1002_01079	0.37	-0.6
1,186,193	-		MIT1002_01079	0.37	+0.0
1,186,193	-		MIT1002_01079	0.37	+0.7
1,186,193	-		MIT1002_01079	0.37	-0.1
1,186,193	-		MIT1002_01079	0.37	+0.4
1,186,193	-		MIT1002_01079	0.37	-0.4
1,186,193	-		MIT1002_01079	0.37	-0.4
1,186,193	-		MIT1002_01079	0.37	+0.9
1,186,236	+		MIT1002_01079	0.41	-2.2
1,186,244	-		MIT1002_01079	0.42	-1.8
1,186,245	-		MIT1002_01079	0.42	-1.1
1,186,246	-		MIT1002_01079	0.42	-1.1
1,186,291	+		MIT1002_01079	0.46	+0.4
1,186,394	+		MIT1002_01079	0.56	+0.4
1,186,394	+		MIT1002_01079	0.56	+0.6
1,186,394	+		MIT1002_01079	0.56	+0.4
1,186,401	+		MIT1002_01079	0.56	+1.5
1,186,402	-		MIT1002_01079	0.56	-1.5
1,186,491	+		MIT1002_01079	0.65	-0.9
1,186,499	-		MIT1002_01079	0.65	+0.2
1,186,520	+		MIT1002_01079	0.67	-2.1
1,186,528	-		MIT1002_01079	0.68	+0.5
1,186,554	-		MIT1002_01079	0.70	-2.6
1,186,579	+		MIT1002_01079	0.73	+0.7
1,186,580	-		MIT1002_01079	0.73	+2.5
1,186,587	-		MIT1002_01079	0.74	+0.5
1,186,654	-		MIT1002_01079	0.80	-0.4
1,186,682	-		MIT1002_01079	0.82	-0.4
1,186,720	-		MIT1002_01079	0.86	+1.5
1,186,753	+		MIT1002_01079	0.89	-0.3
1,186,854	-				+0.4
1,186,893	+				+3.4
1,186,901	-				+0.6
1,186,910	-				+0.1
1,186,913	+				+0.1
1,186,928	+				+0.1
1,186,928	+				+0.2
1,186,928	+				+2.2
1,186,928	+				-0.0
1,186,936	-				-0.8
1,186,958	-				-0.9
1,187,131	-		MIT1002_01080	0.13	-1.9
1,187,206	-		MIT1002_01080	0.22	+0.6
1,187,343	+		MIT1002_01080	0.39	+0.7
1,187,343	+		MIT1002_01080	0.39	+1.4
1,187,343	+		MIT1002_01080	0.39	-0.2
1,187,343	+		MIT1002_01080	0.39	+1.4
1,187,351	-		MIT1002_01080	0.40	-0.6
1,187,351	-		MIT1002_01080	0.40	-0.9
1,187,351	-		MIT1002_01080	0.40	-1.0
1,187,399	-		MIT1002_01080	0.46	-0.9
1,187,399	-		MIT1002_01080	0.46	+1.8
1,187,493	+		MIT1002_01080	0.58	+0.7
1,187,512	+		MIT1002_01080	0.60	-2.0
1,187,512	+		MIT1002_01080	0.60	-1.1
1,187,512	+		MIT1002_01080	0.60	+0.9
1,187,512	+		MIT1002_01080	0.60	+2.3
1,187,515	-		MIT1002_01080	0.61	-0.7
1,187,520	-		MIT1002_01080	0.61	-0.9
1,187,520	-		MIT1002_01080	0.61	+1.8
1,187,520	-		MIT1002_01080	0.61	+1.4
1,187,545	+		MIT1002_01080	0.64	+0.9
1,187,617	+		MIT1002_01080	0.73	+0.7
1,187,625	-		MIT1002_01080	0.74	-2.2
1,187,630	-		MIT1002_01080	0.75	-0.5
1,187,636	-		MIT1002_01080	0.76	+0.4
1,187,708	+		MIT1002_01080	0.85	+0.1
1,187,708	+		MIT1002_01080	0.85	-2.2
1,187,729	+		MIT1002_01080	0.87	+0.2