Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00128

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 7
136,870	-		MIT1002_00127	0.41	-0.1
136,888	+		MIT1002_00127	0.42	-0.2
136,896	-		MIT1002_00127	0.43	+0.2
136,896	-		MIT1002_00127	0.43	-0.3
136,914	-		MIT1002_00127	0.44	-0.4
136,932	+		MIT1002_00127	0.46	+2.8
136,935	-		MIT1002_00127	0.46	+0.3
136,958	-		MIT1002_00127	0.48	+0.5
136,974	-		MIT1002_00127	0.49	-0.0
136,975	+		MIT1002_00127	0.49	+0.3
137,052	-		MIT1002_00127	0.56	-0.4
137,054	+		MIT1002_00127	0.56	+0.9
137,054	+		MIT1002_00127	0.56	-1.5
137,062	-		MIT1002_00127	0.57	+1.5
137,062	-		MIT1002_00127	0.57	-1.2
137,062	-		MIT1002_00127	0.57	-1.2
137,062	-		MIT1002_00127	0.57	-0.1
137,062	-		MIT1002_00127	0.57	+0.8
137,062	-		MIT1002_00127	0.57	+0.2
137,064	+		MIT1002_00127	0.57	+0.8
137,072	-		MIT1002_00127	0.58	-0.6
137,072	-		MIT1002_00127	0.58	-2.3
137,072	-		MIT1002_00127	0.58	-2.3
137,086	-		MIT1002_00127	0.59	+2.4
137,111	+		MIT1002_00127	0.61	-0.2
137,221	-		MIT1002_00127	0.70	-1.3
137,225	+		MIT1002_00127	0.71	+0.2
137,230	+		MIT1002_00127	0.71	+1.3
137,230	+		MIT1002_00127	0.71	+1.3
137,238	-		MIT1002_00127	0.72	+0.8
137,279	-		MIT1002_00127	0.75	+0.5
137,281	+		MIT1002_00127	0.75	-1.7
137,290	+		MIT1002_00127	0.76	-1.2
137,290	+		MIT1002_00127	0.76	+2.2
137,298	-		MIT1002_00127	0.77	+0.4
137,298	-		MIT1002_00127	0.77	+0.3
137,310	+		MIT1002_00127	0.78	+0.9
137,310	+		MIT1002_00127	0.78	-0.4
137,318	-		MIT1002_00127	0.78	+0.1
137,318	-		MIT1002_00127	0.78	+1.9
137,318	-		MIT1002_00127	0.78	-1.0
137,381	+		MIT1002_00127	0.84	-0.8
137,403	-		MIT1002_00127	0.86	+0.9
137,403	-		MIT1002_00127	0.86	-0.0
137,403	-		MIT1002_00127	0.86	+0.4
137,531	+				-1.3
137,656	-				-0.2
137,738	+				+0.4
137,778	+				-1.4
137,778	+				-0.2
137,955	+		MIT1002_00128	0.12	-0.0
138,043	-		MIT1002_00128	0.17	-0.3
138,056	+		MIT1002_00128	0.18	+0.1
138,064	-		MIT1002_00128	0.19	-0.2
138,116	-		MIT1002_00128	0.22	-1.3
138,184	-		MIT1002_00128	0.26	+0.6
138,197	-		MIT1002_00128	0.27	-1.6
138,197	-		MIT1002_00128	0.27	-1.1
138,197	-		MIT1002_00128	0.27	-1.8
138,197	-		MIT1002_00128	0.27	-0.0
138,218	+		MIT1002_00128	0.29	-0.2
138,218	+		MIT1002_00128	0.29	+0.1
138,221	-		MIT1002_00128	0.29	-0.7
138,226	-		MIT1002_00128	0.29	-1.2
138,226	-		MIT1002_00128	0.29	-0.2
138,227	-		MIT1002_00128	0.29	-2.6
138,232	-		MIT1002_00128	0.30	-1.9
138,254	-		MIT1002_00128	0.31	-1.9
138,300	-		MIT1002_00128	0.34	+0.5
138,326	+		MIT1002_00128	0.36	+1.0
138,335	-		MIT1002_00128	0.36	-2.1
138,337	-		MIT1002_00128	0.36	+0.1
138,369	+		MIT1002_00128	0.38	+1.4
138,388	-		MIT1002_00128	0.40	-1.4
138,532	+		MIT1002_00128	0.49	-0.5
138,545	-		MIT1002_00128	0.50	-0.7
138,594	+		MIT1002_00128	0.53	-0.6
138,663	+		MIT1002_00128	0.57	+0.2
138,738	+		MIT1002_00128	0.62	-0.8
138,746	-		MIT1002_00128	0.62	-0.8
138,756	+		MIT1002_00128	0.63	-0.9
138,819	+		MIT1002_00128	0.67	+0.2
138,819	+		MIT1002_00128	0.67	+0.5
138,827	-		MIT1002_00128	0.68	-3.6
138,827	-		MIT1002_00128	0.68	-0.1
138,828	-		MIT1002_00128	0.68	-1.0
138,863	+		MIT1002_00128	0.70	+0.4
138,888	+		MIT1002_00128	0.72	-1.3
138,893	+		MIT1002_00128	0.72	+1.0
138,896	-		MIT1002_00128	0.72	+0.3
138,963	+		MIT1002_00128	0.76	+0.7
138,971	-		MIT1002_00128	0.77	-1.3
138,994	+		MIT1002_00128	0.78	-1.5
139,002	-		MIT1002_00128	0.79	+1.0
139,052	+		MIT1002_00128	0.82	-0.4
139,070	-		MIT1002_00128	0.83	-0.4
139,080	-		MIT1002_00128	0.84	-0.1
139,137	-		MIT1002_00128	0.88	-0.9
139,157	+		MIT1002_00128	0.89	-0.7
139,222	-				-1.5
139,244	+				-0.8
139,252	-				+0.1
139,287	+				+0.3
139,287	+				-0.3
139,287	+				-0.1
139,287	+				+0.0
139,287	+				-3.2
139,295	-				+0.8
139,295	-				-1.8
139,295	-				-0.2
139,295	-				-1.5
139,300	+				-0.2
139,335	+				+1.4
139,348	+				+0.2
139,361	+				+1.3
139,363	+				+1.2
139,363	+				+0.4
139,363	+				+0.8
139,371	-				+1.1
139,371	-				-1.0
139,371	-				+0.9
139,371	-				-1.6
139,371	-				-1.0
139,373	+				-1.6
139,373	+				+0.5
139,373	+				-1.4
139,373	+				-2.1
139,381	-				+1.2
139,406	+				+0.9
139,414	-				-0.3
139,414	-				-0.1
139,555	-		MIT1002_00129	0.21	+0.2
139,569	-		MIT1002_00129	0.22	+1.7
139,590	-		MIT1002_00129	0.25	+0.7
139,610	+		MIT1002_00129	0.27	+0.9
139,632	-		MIT1002_00129	0.29	+0.9
139,643	+		MIT1002_00129	0.31	-0.6
139,691	+		MIT1002_00129	0.36	+1.1
139,788	+		MIT1002_00129	0.47	-2.7
139,789	-		MIT1002_00129	0.47	-0.0
139,796	-		MIT1002_00129	0.48	+2.6
139,796	-		MIT1002_00129	0.48	-0.5
139,796	-		MIT1002_00129	0.48	+0.2
139,813	+		MIT1002_00129	0.50	+1.4
139,821	-		MIT1002_00129	0.51	-2.3
139,847	-		MIT1002_00129	0.54	-2.2
139,915	+		MIT1002_00129	0.61	-1.5
139,989	-		MIT1002_00129	0.70	-1.0
140,039	-		MIT1002_00129	0.75	+0.4
140,115	-		MIT1002_00129	0.84	-0.4
140,118	-		MIT1002_00129	0.84	+1.1
140,175	+				-0.6
140,175	+				-3.4
140,175	+				+1.4
140,175	+				+1.0
140,183	-				+0.8
140,183	-				-0.4
140,183	-				+1.8
140,183	-				+0.3
140,183	-				-1.1
140,212	+				-0.8
140,212	+				+0.1
140,212	+				-1.2
140,212	+				-0.5
140,220	-				+0.6
140,220	-				+0.7
140,220	-				+1.0
140,220	-				-1.7
140,220	-				+1.7
140,220	-				+0.0
140,220	-				+0.2
140,220	-				-1.2
140,277	-				-1.9