Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17700

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
3,878,333	+				-2.9
3,878,333	+				-0.2
3,878,333	+				-0.7
3,878,334	-				-0.6
3,878,334	-				+1.4
3,878,334	-				+1.6
3,878,334	-				-1.9
3,878,334	-				-1.3
3,878,378	+		LRK53_RS17695	0.12	-1.1
3,878,378	+		LRK53_RS17695	0.12	+0.8
3,878,379	-		LRK53_RS17695	0.12	-0.9
3,878,379	-		LRK53_RS17695	0.12	+1.4
3,878,403	+		LRK53_RS17695	0.15	-2.6
3,878,403	+		LRK53_RS17695	0.15	-0.8
3,878,403	+		LRK53_RS17695	0.15	-0.3
3,878,403	+		LRK53_RS17695	0.15	-0.1
3,878,403	+		LRK53_RS17695	0.15	-2.3
3,878,403	+		LRK53_RS17695	0.15	+0.2
3,878,403	+		LRK53_RS17695	0.15	+0.0
3,878,403	+		LRK53_RS17695	0.15	-1.0
3,878,403	+		LRK53_RS17695	0.15	+0.2
3,878,403	+		LRK53_RS17695	0.15	-1.7
3,878,403	+		LRK53_RS17695	0.15	-1.4
3,878,403	+		LRK53_RS17695	0.15	-0.9
3,878,403	+		LRK53_RS17695	0.15	+0.6
3,878,403	+		LRK53_RS17695	0.15	-0.1
3,878,403	+		LRK53_RS17695	0.15	-0.4
3,878,403	+		LRK53_RS17695	0.15	-1.2
3,878,403	+		LRK53_RS17695	0.15	+1.4
3,878,403	+		LRK53_RS17695	0.15	-1.9
3,878,403	+		LRK53_RS17695	0.15	-0.0
3,878,404	-		LRK53_RS17695	0.15	+0.3
3,878,404	-		LRK53_RS17695	0.15	-0.2
3,878,404	-		LRK53_RS17695	0.15	-0.6
3,878,404	-		LRK53_RS17695	0.15	-1.2
3,878,404	-		LRK53_RS17695	0.15	-0.6
3,878,404	-		LRK53_RS17695	0.15	-0.9
3,878,404	-		LRK53_RS17695	0.15	+0.3
3,878,404	-		LRK53_RS17695	0.15	-0.2
3,878,404	-		LRK53_RS17695	0.15	-0.8
3,878,404	-		LRK53_RS17695	0.15	+0.1
3,878,404	-		LRK53_RS17695	0.15	+0.7
3,878,405	+		LRK53_RS17695	0.15	-0.4
3,878,405	+		LRK53_RS17695	0.15	+0.3
3,878,405	+		LRK53_RS17695	0.15	+0.4
3,878,405	+		LRK53_RS17695	0.15	+0.8
3,878,405	+		LRK53_RS17695	0.15	+0.6
3,878,405	+		LRK53_RS17695	0.15	-1.3
3,878,405	+		LRK53_RS17695	0.15	+3.7
3,878,405	+		LRK53_RS17695	0.15	-1.9
3,878,405	+		LRK53_RS17695	0.15	-0.9
3,878,405	+		LRK53_RS17695	0.15	+0.3
3,878,405	+		LRK53_RS17695	0.15	-1.5
3,878,405	+		LRK53_RS17695	0.15	+1.0
3,878,405	+		LRK53_RS17695	0.15	-0.5
3,878,406	-		LRK53_RS17695	0.15	+0.1
3,878,406	-		LRK53_RS17695	0.15	+0.5
3,878,406	-		LRK53_RS17695	0.15	-0.5
3,878,406	-		LRK53_RS17695	0.15	-1.4
3,878,406	-		LRK53_RS17695	0.15	+0.2
3,878,406	-		LRK53_RS17695	0.15	-0.6
3,878,406	-		LRK53_RS17695	0.15	-0.8
3,878,406	-		LRK53_RS17695	0.15	+0.4
3,878,406	-		LRK53_RS17695	0.15	-0.5
3,878,406	-		LRK53_RS17695	0.15	-1.0
3,878,406	-		LRK53_RS17695	0.15	-1.4
3,878,406	-		LRK53_RS17695	0.15	+1.5
3,878,459	-		LRK53_RS17695	0.20	+1.0
3,878,459	-		LRK53_RS17695	0.20	+0.5
3,878,474	+		LRK53_RS17695	0.22	+0.0
3,878,474	+		LRK53_RS17695	0.22	-1.1
3,878,474	+		LRK53_RS17695	0.22	-1.1
3,878,475	-		LRK53_RS17695	0.22	-0.4
3,878,475	-		LRK53_RS17695	0.22	+0.5
3,878,475	-		LRK53_RS17695	0.22	-0.4
3,878,475	-		LRK53_RS17695	0.22	+0.8
3,878,509	-		LRK53_RS17695	0.25	-2.3
3,879,152	+				-0.3
3,879,152	+				-0.6
3,879,153	-				+1.5
3,879,153	-				+0.8
3,879,160	+				-2.6
3,879,161	-				-0.5
3,879,214	+				-0.6
3,879,214	+				-1.8
3,879,261	+				-0.4
3,879,261	+				-0.9
3,879,261	+				-1.0
3,879,261	+				-0.8
3,879,261	+				+0.9
3,879,261	+				-1.3
3,879,261	+				-0.3
3,879,262	-				-1.8
3,879,262	-				+1.4
3,879,262	-				+0.5
3,879,262	-				-1.1
3,879,316	+				-1.2
3,879,316	+				-1.4
3,879,316	+				-1.4
3,879,316	+				-1.5
3,879,316	+				-0.5
3,879,316	+				+1.1
3,879,316	+				-0.0
3,879,316	+				-0.5
3,879,316	+				-2.2
3,879,316	+				-0.5
3,879,316	+				-0.2
3,879,316	+				+0.8
3,879,316	+				-1.7
3,879,316	+				-0.6
3,879,316	+				-1.8
3,879,316	+				-1.2
3,879,317	-				-0.2
3,879,317	-				-0.4
3,879,317	-				-2.9
3,879,317	-				-2.0
3,879,317	-				+0.6
3,879,317	-				+0.5
3,879,317	-				-1.9
3,879,317	-				-1.6
3,879,317	-				-0.4
3,879,317	-				-1.9
3,879,317	-				-0.8
3,879,322	+				-1.3
3,879,322	+				-1.4
3,879,322	+				-0.9
3,879,322	+				-2.0
3,879,322	+				-0.6
3,879,322	+				-2.4
3,879,322	+				-1.0
3,879,323	-				+0.2
3,879,323	-				-0.4
3,879,323	-				+0.0
3,879,323	-				-0.1
3,879,376	+				-0.6
3,879,376	+				-0.2
3,879,376	+				+1.6
3,879,376	+				-1.1
3,879,376	+				-1.0
3,879,376	+				-0.6
3,879,376	+				-0.6
3,879,376	+				-1.8
3,879,376	+				+0.5
3,879,377	-				+0.5
3,879,377	-				+2.0
3,879,377	-				-0.6
3,879,377	-				-1.9
3,879,386	+				+0.7
3,879,386	+				-1.0
3,879,507	+		LRK53_RS17700	0.21	-1.2
3,879,507	+		LRK53_RS17700	0.21	-0.6
3,879,507	+		LRK53_RS17700	0.21	-0.3
3,879,507	+		LRK53_RS17700	0.21	+0.7
3,879,507	+		LRK53_RS17700	0.21	-0.7
3,879,507	+		LRK53_RS17700	0.21	+0.0
3,879,507	+		LRK53_RS17700	0.21	-1.4
3,879,507	+		LRK53_RS17700	0.21	+0.9
3,879,507	+		LRK53_RS17700	0.21	-1.9
3,879,507	+		LRK53_RS17700	0.21	-1.3
3,879,508	-		LRK53_RS17700	0.21	-0.6
3,879,508	-		LRK53_RS17700	0.21	-1.7
3,879,508	-		LRK53_RS17700	0.21	-0.1
3,879,508	-		LRK53_RS17700	0.21	-1.0
3,879,508	-		LRK53_RS17700	0.21	+0.4
3,879,508	-		LRK53_RS17700	0.21	-0.8
3,879,595	+		LRK53_RS17700	0.31	-0.6
3,879,595	+		LRK53_RS17700	0.31	+0.2
3,879,595	+		LRK53_RS17700	0.31	-1.8
3,879,595	+		LRK53_RS17700	0.31	-1.0
3,879,596	-		LRK53_RS17700	0.31	-0.4
3,879,596	-		LRK53_RS17700	0.31	-1.0
3,879,596	-		LRK53_RS17700	0.31	-0.4
3,879,596	-		LRK53_RS17700	0.31	-2.2
3,879,596	-		LRK53_RS17700	0.31	-0.8
3,879,596	-		LRK53_RS17700	0.31	-0.4
3,879,596	-		LRK53_RS17700	0.31	+0.3
3,879,596	-		LRK53_RS17700	0.31	-0.8
3,879,608	+		LRK53_RS17700	0.32	-0.9
3,879,608	+		LRK53_RS17700	0.32	-0.2
3,879,608	+		LRK53_RS17700	0.32	-0.1
3,879,608	+		LRK53_RS17700	0.32	-1.6
3,879,608	+		LRK53_RS17700	0.32	+0.2
3,879,609	-		LRK53_RS17700	0.33	-1.0
3,879,609	-		LRK53_RS17700	0.33	+0.2
3,879,609	-		LRK53_RS17700	0.33	-1.9
3,879,609	-		LRK53_RS17700	0.33	-0.7
3,879,609	-		LRK53_RS17700	0.33	-2.0
3,879,633	+		LRK53_RS17700	0.35	+0.1
3,879,633	+		LRK53_RS17700	0.35	-0.8
3,879,633	+		LRK53_RS17700	0.35	-0.1
3,879,633	+		LRK53_RS17700	0.35	-2.7
3,879,633	+		LRK53_RS17700	0.35	+0.5
3,879,634	-		LRK53_RS17700	0.35	-0.6
3,879,634	-		LRK53_RS17700	0.35	-0.9
3,879,634	-		LRK53_RS17700	0.35	+2.5
3,879,636	+		LRK53_RS17700	0.36	-1.3
3,879,637	-		LRK53_RS17700	0.36	-1.3
3,879,637	-		LRK53_RS17700	0.36	-0.0
3,879,637	-		LRK53_RS17700	0.36	-1.0
3,879,684	+		LRK53_RS17700	0.41	-0.4
3,879,684	+		LRK53_RS17700	0.41	-0.1
3,879,684	+		LRK53_RS17700	0.41	-2.5
3,879,684	+		LRK53_RS17700	0.41	-0.8
3,879,684	+		LRK53_RS17700	0.41	-0.8
3,879,684	+		LRK53_RS17700	0.41	-1.6
3,879,685	-		LRK53_RS17700	0.41	-1.3
3,879,685	-		LRK53_RS17700	0.41	-0.1
3,879,685	-		LRK53_RS17700	0.41	-0.5
3,879,685	-		LRK53_RS17700	0.41	+1.7
3,879,685	-		LRK53_RS17700	0.41	-0.6
3,879,685	-		LRK53_RS17700	0.41	+0.2
3,879,685	-		LRK53_RS17700	0.41	-0.5
3,879,685	-		LRK53_RS17700	0.41	+0.2
3,879,685	-		LRK53_RS17700	0.41	-1.6
3,879,685	-		LRK53_RS17700	0.41	-0.8
3,879,743	+		LRK53_RS17700	0.48	-1.7
3,879,743	+		LRK53_RS17700	0.48	-0.6
3,879,743	+		LRK53_RS17700	0.48	-0.7
3,879,744	-		LRK53_RS17700	0.48	-2.2
3,879,785	+		LRK53_RS17700	0.52	-0.7
3,879,785	+		LRK53_RS17700	0.52	+0.8
3,879,785	+		LRK53_RS17700	0.52	+0.2
3,879,876	+		LRK53_RS17700	0.63	-0.9
3,879,882	+		LRK53_RS17700	0.63	+0.1
3,879,882	+		LRK53_RS17700	0.63	-2.6
3,879,882	+		LRK53_RS17700	0.63	-1.1
3,879,882	+		LRK53_RS17700	0.63	-0.1
3,879,882	+		LRK53_RS17700	0.63	-0.2
3,879,882	+		LRK53_RS17700	0.63	-1.9
3,879,882	+		LRK53_RS17700	0.63	-2.7
3,879,882	+		LRK53_RS17700	0.63	-0.7
3,879,882	+		LRK53_RS17700	0.63	-1.1
3,879,882	+		LRK53_RS17700	0.63	-1.0
3,879,882	+		LRK53_RS17700	0.63	+0.1
3,879,882	+		LRK53_RS17700	0.63	-0.3
3,879,882	+		LRK53_RS17700	0.63	-0.4
3,879,882	+		LRK53_RS17700	0.63	-1.3
3,879,882	+		LRK53_RS17700	0.63	+0.3
3,879,882	+		LRK53_RS17700	0.63	-0.3
3,879,882	+		LRK53_RS17700	0.63	-1.1
3,879,882	+		LRK53_RS17700	0.63	-0.2
3,879,882	+		LRK53_RS17700	0.63	-0.6
3,879,882	+		LRK53_RS17700	0.63	-2.4
3,879,882	+		LRK53_RS17700	0.63	-2.6
3,879,882	+		LRK53_RS17700	0.63	+1.0
3,879,882	+		LRK53_RS17700	0.63	-2.1
3,879,882	+		LRK53_RS17700	0.63	-0.2
3,879,882	+		LRK53_RS17700	0.63	-0.9
3,879,882	+		LRK53_RS17700	0.63	-0.3
3,879,882	+		LRK53_RS17700	0.63	+1.1
3,879,882	+		LRK53_RS17700	0.63	+0.9
3,879,882	+		LRK53_RS17700	0.63	-0.8
3,879,882	+		LRK53_RS17700	0.63	-2.3
3,879,882	+		LRK53_RS17700	0.63	-2.4
3,879,882	+		LRK53_RS17700	0.63	-0.7
3,879,882	+		LRK53_RS17700	0.63	+0.1
3,879,882	+		LRK53_RS17700	0.63	-0.8
3,879,882	+		LRK53_RS17700	0.63	-0.5
3,879,883	-		LRK53_RS17700	0.64	-0.5
3,879,883	-		LRK53_RS17700	0.64	-0.5
3,879,883	-		LRK53_RS17700	0.64	-1.0
3,879,883	-		LRK53_RS17700	0.64	-0.4
3,879,883	-		LRK53_RS17700	0.64	-1.0
3,879,883	-		LRK53_RS17700	0.64	-3.8
3,879,883	-		LRK53_RS17700	0.64	-1.1
3,879,883	-		LRK53_RS17700	0.64	-1.2
3,879,883	-		LRK53_RS17700	0.64	-0.9
3,879,883	-		LRK53_RS17700	0.64	-1.1
3,879,883	-		LRK53_RS17700	0.64	-1.3
3,879,883	-		LRK53_RS17700	0.64	-2.6
3,879,883	-		LRK53_RS17700	0.64	-1.4
3,879,883	-		LRK53_RS17700	0.64	+0.3
3,879,883	-		LRK53_RS17700	0.64	-1.1
3,879,883	-		LRK53_RS17700	0.64	-1.3
3,879,883	-		LRK53_RS17700	0.64	+0.0
3,879,883	-		LRK53_RS17700	0.64	-1.3
3,879,883	-		LRK53_RS17700	0.64	-3.1
3,879,883	-		LRK53_RS17700	0.64	-1.3
3,879,883	-		LRK53_RS17700	0.64	-0.5
3,879,883	-		LRK53_RS17700	0.64	-0.5
3,879,883	-		LRK53_RS17700	0.64	-2.8
3,879,883	-		LRK53_RS17700	0.64	-0.6
3,879,883	-		LRK53_RS17700	0.64	-2.6
3,879,883	-		LRK53_RS17700	0.64	-0.5
3,879,883	-		LRK53_RS17700	0.64	-0.4
3,879,883	-		LRK53_RS17700	0.64	-1.9
3,879,883	-		LRK53_RS17700	0.64	+1.6
3,879,883	-		LRK53_RS17700	0.64	-1.1
3,879,883	-		LRK53_RS17700	0.64	-0.8
3,879,883	-		LRK53_RS17700	0.64	-0.7
3,880,014	+		LRK53_RS17700	0.78	-2.4
3,880,015	-		LRK53_RS17700	0.78	-1.0
3,880,075	+		LRK53_RS17700	0.85	-1.2
3,880,075	+		LRK53_RS17700	0.85	-0.7
3,880,075	+		LRK53_RS17700	0.85	-1.3
3,880,075	+		LRK53_RS17700	0.85	-0.9
3,880,079	+		LRK53_RS17700	0.86	-1.2
3,880,079	+		LRK53_RS17700	0.86	-0.9
3,880,079	+		LRK53_RS17700	0.86	-0.6
3,880,079	+		LRK53_RS17700	0.86	+0.2
3,880,079	+		LRK53_RS17700	0.86	-0.6
3,880,079	+		LRK53_RS17700	0.86	+0.4
3,880,079	+		LRK53_RS17700	0.86	+1.0
3,880,079	+		LRK53_RS17700	0.86	-1.6
3,880,079	+		LRK53_RS17700	0.86	-1.7
3,880,079	+		LRK53_RS17700	0.86	-0.4
3,880,079	+		LRK53_RS17700	0.86	-0.2
3,880,079	+		LRK53_RS17700	0.86	-2.3
3,880,079	+		LRK53_RS17700	0.86	-1.6
3,880,079	+		LRK53_RS17700	0.86	+1.2
3,880,080	-		LRK53_RS17700	0.86	-2.6
3,880,080	-		LRK53_RS17700	0.86	+1.3
3,880,080	-		LRK53_RS17700	0.86	-0.5
3,880,080	-		LRK53_RS17700	0.86	+0.7
3,880,080	-		LRK53_RS17700	0.86	-1.0
3,880,080	-		LRK53_RS17700	0.86	-2.2
3,880,090	+		LRK53_RS17700	0.87	-1.4
3,880,090	+		LRK53_RS17700	0.87	+1.1
3,880,090	+		LRK53_RS17700	0.87	-0.8
3,880,090	+		LRK53_RS17700	0.87	-1.4
3,880,090	+		LRK53_RS17700	0.87	-2.4
3,880,090	+		LRK53_RS17700	0.87	-0.9
3,880,090	+		LRK53_RS17700	0.87	-0.4
3,880,090	+		LRK53_RS17700	0.87	-1.1
3,880,090	+		LRK53_RS17700	0.87	+0.1
3,880,090	+		LRK53_RS17700	0.87	-1.7
3,880,091	-		LRK53_RS17700	0.87	+0.9
3,880,091	-		LRK53_RS17700	0.87	+1.6
3,880,091	-		LRK53_RS17700	0.87	+0.2
3,880,091	-		LRK53_RS17700	0.87	-1.9
3,880,091	-		LRK53_RS17700	0.87	-0.6
3,880,091	-		LRK53_RS17700	0.87	-1.6
3,880,091	-		LRK53_RS17700	0.87	-0.6
3,880,091	-		LRK53_RS17700	0.87	-2.7
3,880,091	-		LRK53_RS17700	0.87	+0.5
3,880,091	-		LRK53_RS17700	0.87	-1.2
3,880,091	-		LRK53_RS17700	0.87	+1.5
3,880,091	-		LRK53_RS17700	0.87	-2.0
3,880,091	-		LRK53_RS17700	0.87	-0.1
3,880,091	-		LRK53_RS17700	0.87	+0.4
3,880,096	+		LRK53_RS17700	0.88	-1.5
3,880,096	+		LRK53_RS17700	0.88	+0.3
3,880,097	-		LRK53_RS17700	0.88	-0.4
3,880,164	+				-1.8
3,880,164	+				-0.2
3,880,164	+				+1.2
3,880,164	+				-0.2
3,880,164	+				-1.0
3,880,164	+				-3.3
3,880,165	-				-0.7
3,880,165	-				-1.4
3,880,165	-				-0.9
3,880,165	-				+0.2
3,880,165	-				+0.5
3,880,165	-				-0.6
3,880,165	-				-1.6
3,880,165	-				-1.7
3,880,188	+				-1.0
3,880,188	+				-0.1
3,880,196	+				-0.5
3,880,196	+				-1.4
3,880,197	-				-0.0
3,880,197	-				-0.4
3,880,214	+				-1.3
3,880,214	+				-0.2
3,880,214	+				-2.7
3,880,214	+				+0.7
3,880,253	+				-1.9
3,880,253	+				+0.1
3,880,253	+				-1.5
3,880,253	+				-0.3
3,880,254	-				-0.8
3,880,254	-				-1.1
3,880,254	-				-0.4
3,881,026	-				-0.4
3,881,026	-				-1.2
3,881,026	-				+1.2
3,881,026	-				-2.0
3,881,026	-				-1.5
3,881,026	-				-2.4
3,881,026	-				+1.4
3,881,026	-				-1.2
3,881,026	-				-1.7
3,881,026	-				-0.6
3,881,026	-				+0.2
3,881,026	-				-1.5
3,881,026	-				+1.2
3,881,026	-				-0.5
3,881,026	-				-0.4
3,881,026	-				-1.9
3,881,026	-				-1.7
3,881,026	-				-1.6
3,881,026	-				-0.6
3,881,026	-				-1.3
3,881,030	-				-0.5
3,881,030	-				-1.0
3,881,030	-				-0.4
3,881,030	-				+0.9
3,881,030	-				-1.8
3,881,030	-				-0.2
3,881,030	-				-2.3
3,881,030	-				-3.5
3,881,030	-				-1.2
3,881,030	-				-1.3
3,881,030	-				-1.4
3,881,030	-				-0.5
3,881,030	-				-0.3
3,881,030	-				-1.3
3,881,030	-				-0.4
3,881,030	-				+0.8
3,881,116	-				+0.0
3,881,116	-				+0.0
3,881,116	-				+0.9
3,881,116	-				-1.6
3,881,116	-				-0.2
3,881,116	-				+1.9