Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17265

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
3,795,751	-		LRK53_RS17260	0.29	-0.4
3,795,761	+		LRK53_RS17260	0.30	-1.6
3,795,762	-		LRK53_RS17260	0.30	-0.6
3,795,762	-		LRK53_RS17260	0.30	-0.6
3,796,184	+		LRK53_RS17260	0.60	-1.5
3,796,184	+		LRK53_RS17260	0.60	+0.3
3,796,184	+		LRK53_RS17260	0.60	-0.5
3,796,184	+		LRK53_RS17260	0.60	+0.0
3,796,184	+		LRK53_RS17260	0.60	+1.4
3,796,184	+		LRK53_RS17260	0.60	-0.7
3,796,185	-		LRK53_RS17260	0.60	+1.4
3,796,185	-		LRK53_RS17260	0.60	-0.4
3,796,185	-		LRK53_RS17260	0.60	-1.4
3,796,217	+		LRK53_RS17260	0.63	-1.1
3,796,217	+		LRK53_RS17260	0.63	+0.4
3,796,217	+		LRK53_RS17260	0.63	+0.5
3,796,217	+		LRK53_RS17260	0.63	-1.1
3,796,217	+		LRK53_RS17260	0.63	-0.7
3,796,217	+		LRK53_RS17260	0.63	-2.6
3,796,217	+		LRK53_RS17260	0.63	-0.4
3,796,217	+		LRK53_RS17260	0.63	-0.8
3,796,217	+		LRK53_RS17260	0.63	-0.1
3,796,217	+		LRK53_RS17260	0.63	+0.5
3,796,217	+		LRK53_RS17260	0.63	-0.4
3,796,217	+		LRK53_RS17260	0.63	-1.2
3,796,217	+		LRK53_RS17260	0.63	-1.6
3,796,217	+		LRK53_RS17260	0.63	-0.6
3,796,217	+		LRK53_RS17260	0.63	+0.9
3,796,217	+		LRK53_RS17260	0.63	-1.3
3,796,217	+		LRK53_RS17260	0.63	-1.1
3,796,217	+		LRK53_RS17260	0.63	-0.8
3,796,217	+		LRK53_RS17260	0.63	-0.6
3,796,217	+		LRK53_RS17260	0.63	+0.9
3,796,217	+		LRK53_RS17260	0.63	+1.5
3,796,218	-		LRK53_RS17260	0.63	-0.6
3,796,218	-		LRK53_RS17260	0.63	-1.0
3,796,218	-		LRK53_RS17260	0.63	-1.1
3,796,218	-		LRK53_RS17260	0.63	-1.7
3,796,218	-		LRK53_RS17260	0.63	-0.6
3,796,218	-		LRK53_RS17260	0.63	-0.5
3,796,218	-		LRK53_RS17260	0.63	-2.0
3,796,218	-		LRK53_RS17260	0.63	-1.6
3,796,218	-		LRK53_RS17260	0.63	-1.2
3,796,218	-		LRK53_RS17260	0.63	+0.3
3,796,218	-		LRK53_RS17260	0.63	-0.6
3,796,218	-		LRK53_RS17260	0.63	-1.2
3,796,218	-		LRK53_RS17260	0.63	+2.5
3,796,218	-		LRK53_RS17260	0.63	-0.3
3,796,218	-		LRK53_RS17260	0.63	-0.4
3,796,218	-		LRK53_RS17260	0.63	+0.2
3,796,218	-		LRK53_RS17260	0.63	-0.3
3,796,218	-		LRK53_RS17260	0.63	-0.8
3,796,218	-		LRK53_RS17260	0.63	-0.5
3,796,280	+		LRK53_RS17260	0.67	-2.3
3,796,280	+		LRK53_RS17260	0.67	-0.1
3,796,280	+		LRK53_RS17260	0.67	-0.5
3,796,280	+		LRK53_RS17260	0.67	-3.3
3,796,280	+		LRK53_RS17260	0.67	+0.9
3,796,281	-		LRK53_RS17260	0.67	+1.0
3,796,281	-		LRK53_RS17260	0.67	-2.0
3,796,281	-		LRK53_RS17260	0.67	-0.6
3,796,281	-		LRK53_RS17260	0.67	+0.3
3,796,281	-		LRK53_RS17260	0.67	+0.6
3,796,281	-		LRK53_RS17260	0.67	+1.2
3,796,281	-		LRK53_RS17260	0.67	+0.5
3,796,281	-		LRK53_RS17260	0.67	-0.2
3,796,281	-		LRK53_RS17260	0.67	-0.8
3,796,281	-		LRK53_RS17260	0.67	-1.1
3,796,281	-		LRK53_RS17260	0.67	+0.3
3,796,281	-		LRK53_RS17260	0.67	+0.9
3,796,281	-		LRK53_RS17260	0.67	+2.0
3,796,281	-		LRK53_RS17260	0.67	+1.5
3,796,308	+		LRK53_RS17260	0.69	-1.2
3,796,308	+		LRK53_RS17260	0.69	+0.0
3,796,308	+		LRK53_RS17260	0.69	-0.7
3,796,309	-		LRK53_RS17260	0.69	+0.7
3,796,309	-		LRK53_RS17260	0.69	-0.1
3,796,309	-		LRK53_RS17260	0.69	+0.0
3,796,331	+		LRK53_RS17260	0.71	-2.1
3,796,331	+		LRK53_RS17260	0.71	+0.3
3,796,331	+		LRK53_RS17260	0.71	-1.0
3,796,331	+		LRK53_RS17260	0.71	-2.0
3,796,331	+		LRK53_RS17260	0.71	+0.3
3,796,331	+		LRK53_RS17260	0.71	-0.4
3,796,331	+		LRK53_RS17260	0.71	-0.6
3,796,332	-		LRK53_RS17260	0.71	-1.1
3,796,332	-		LRK53_RS17260	0.71	-1.1
3,796,332	-		LRK53_RS17260	0.71	+0.3
3,796,332	-		LRK53_RS17260	0.71	-0.1
3,796,448	+		LRK53_RS17260	0.79	-0.1
3,796,448	+		LRK53_RS17260	0.79	-2.2
3,796,448	+		LRK53_RS17260	0.79	+0.0
3,796,448	+		LRK53_RS17260	0.79	-3.1
3,796,448	+		LRK53_RS17260	0.79	-2.1
3,796,448	+		LRK53_RS17260	0.79	+0.1
3,796,448	+		LRK53_RS17260	0.79	+0.7
3,796,449	-		LRK53_RS17260	0.79	+0.5
3,796,449	-		LRK53_RS17260	0.79	-0.5
3,796,449	-		LRK53_RS17260	0.79	+0.0
3,796,449	-		LRK53_RS17260	0.79	-2.0
3,796,449	-		LRK53_RS17260	0.79	+0.7
3,796,449	-		LRK53_RS17260	0.79	-2.1
3,796,449	-		LRK53_RS17260	0.79	-0.5
3,796,608	+				-1.3
3,796,608	+				-0.7
3,796,608	+				+0.7
3,796,608	+				+0.2
3,796,608	+				-0.9
3,796,608	+				-0.7
3,796,608	+				+0.5
3,796,609	-				-0.8
3,796,609	-				-0.5
3,796,609	-				-0.1
3,796,769	-				+0.3
3,796,791	-				-0.5
3,796,791	-				+0.4
3,796,808	+				-2.1
3,796,808	+				+0.5
3,796,808	+				-2.1
3,796,808	+				+0.9
3,796,808	+				-0.8
3,796,808	+				-0.8
3,796,808	+				+1.0
3,796,808	+				-0.8
3,796,808	+				+1.2
3,796,809	-				+0.6
3,796,809	-				-2.6
3,796,809	-				-0.4
3,796,809	-				+0.0
3,796,809	-				+0.9
3,796,809	-				-0.3
3,796,809	-				+0.6
3,796,809	-				+0.4
3,797,057	+		LRK53_RS17265	0.40	-2.2
3,797,057	+		LRK53_RS17265	0.40	-0.1
3,797,057	+		LRK53_RS17265	0.40	-1.5
3,797,057	+		LRK53_RS17265	0.40	+0.9
3,797,057	+		LRK53_RS17265	0.40	-2.1
3,797,058	-		LRK53_RS17265	0.40	-0.1
3,797,058	-		LRK53_RS17265	0.40	-0.3
3,797,058	-		LRK53_RS17265	0.40	-1.8
3,797,058	-		LRK53_RS17265	0.40	+1.9
3,797,074	+		LRK53_RS17265	0.42	+2.9
3,797,075	-		LRK53_RS17265	0.42	+0.3
3,797,075	-		LRK53_RS17265	0.42	-0.8
3,797,075	-		LRK53_RS17265	0.42	-1.1
3,797,126	-		LRK53_RS17265	0.48	-2.1
3,797,126	-		LRK53_RS17265	0.48	-1.4
3,797,196	+		LRK53_RS17265	0.57	+0.0
3,797,197	-		LRK53_RS17265	0.57	-0.3
3,797,441	-		LRK53_RS17265	0.87	+3.1
3,797,441	-		LRK53_RS17265	0.87	-0.5
3,797,441	-		LRK53_RS17265	0.87	-1.6
3,797,524	+				+0.5
3,797,524	+				+0.3
3,797,524	+				-0.7
3,797,525	-				-1.5
3,797,525	-				-1.8
3,797,525	-				-0.5
3,797,525	-				-0.3
3,797,525	-				-1.8
3,797,525	-				+1.0
3,797,525	-				+0.2
3,797,525	-				-1.3
3,797,525	-				+0.5
3,797,525	-				+0.4
3,797,525	-				-0.5
3,797,525	-				-0.2
3,797,525	-				-1.0
3,797,525	-				-0.7
3,797,574	+				+1.5
3,797,574	+				-1.5
3,797,574	+				-1.9
3,797,574	+				+0.9
3,797,575	-				-2.0
3,797,631	+		LRK53_RS17270	0.13	-0.6
3,797,632	-		LRK53_RS17270	0.13	+0.7
3,797,824	+		LRK53_RS17270	0.56	+1.9
3,797,824	+		LRK53_RS17270	0.56	-1.1
3,797,824	+		LRK53_RS17270	0.56	-0.6
3,797,824	+		LRK53_RS17270	0.56	+0.9
3,797,824	+		LRK53_RS17270	0.56	-1.0
3,797,824	+		LRK53_RS17270	0.56	-1.0
3,797,824	+		LRK53_RS17270	0.56	+2.3
3,797,824	+		LRK53_RS17270	0.56	-0.6
3,797,824	+		LRK53_RS17270	0.56	-0.4
3,797,825	-		LRK53_RS17270	0.56	+0.5
3,797,825	-		LRK53_RS17270	0.56	-1.1
3,797,825	-		LRK53_RS17270	0.56	-0.3
3,797,825	-		LRK53_RS17270	0.56	+0.1
3,797,826	+		LRK53_RS17270	0.57	+1.0
3,797,826	+		LRK53_RS17270	0.57	-1.0
3,797,826	+		LRK53_RS17270	0.57	-0.5
3,797,826	+		LRK53_RS17270	0.57	+0.0
3,797,826	+		LRK53_RS17270	0.57	+1.3
3,797,826	+		LRK53_RS17270	0.57	-0.7
3,797,826	+		LRK53_RS17270	0.57	+0.6
3,797,826	+		LRK53_RS17270	0.57	-3.0
3,797,827	-		LRK53_RS17270	0.57	-0.9
3,797,827	-		LRK53_RS17270	0.57	-1.7
3,797,827	-		LRK53_RS17270	0.57	-1.2
3,797,827	-		LRK53_RS17270	0.57	-0.6
3,797,827	-		LRK53_RS17270	0.57	-0.4
3,797,827	-		LRK53_RS17270	0.57	+0.5
3,797,827	-		LRK53_RS17270	0.57	+1.4
3,797,827	-		LRK53_RS17270	0.57	-2.2
3,797,827	-		LRK53_RS17270	0.57	-0.7
3,798,013	+				-0.7
3,798,013	+				-2.7
3,798,013	+				+1.0
3,798,013	+				-1.2
3,798,013	+				-0.3
3,798,013	+				-0.7
3,798,014	-				-2.5
3,798,014	-				-0.0
3,798,014	-				-0.6
3,798,033	+				+0.6
3,798,033	+				-0.9
3,798,033	+				-0.5
3,798,034	-				+2.1
3,798,034	-				-1.3
3,798,034	-				-0.6
3,798,105	+				-2.5
3,798,105	+				-0.5
3,798,105	+				-0.3
3,798,105	+				-0.7
3,798,105	+				+1.1
3,798,105	+				-1.7
3,798,105	+				+0.2
3,798,105	+				-1.2
3,798,105	+				+0.9
3,798,105	+				-1.5
3,798,106	-				-0.8
3,798,106	-				-1.5
3,798,106	-				-0.5
3,798,106	-				-0.3
3,798,106	-				-1.9
3,798,106	-				+0.4
3,798,106	-				+0.9
3,798,106	-				-1.5
3,798,106	-				+2.9
3,798,106	-				+0.7
3,798,106	-				-0.7
3,798,106	-				-1.7
3,798,106	-				-1.1
3,798,147	+				-1.6
3,798,250	-		LRK53_RS17275	0.15	-1.2
3,798,312	+		LRK53_RS17275	0.19	-0.3
3,798,312	+		LRK53_RS17275	0.19	-0.9
3,798,312	+		LRK53_RS17275	0.19	-0.5
3,798,312	+		LRK53_RS17275	0.19	-0.1
3,798,313	-		LRK53_RS17275	0.19	-1.5
3,798,313	-		LRK53_RS17275	0.19	-2.2
3,798,313	-		LRK53_RS17275	0.19	+0.2
3,798,313	-		LRK53_RS17275	0.19	-0.8
3,798,313	-		LRK53_RS17275	0.19	-1.1
3,798,340	+		LRK53_RS17275	0.21	-1.7
3,798,340	+		LRK53_RS17275	0.21	-0.3
3,798,340	+		LRK53_RS17275	0.21	-1.3
3,798,340	+		LRK53_RS17275	0.21	+0.5
3,798,341	-		LRK53_RS17275	0.21	-0.4
3,798,385	-		LRK53_RS17275	0.23	-0.6
3,798,498	+		LRK53_RS17275	0.31	+0.5
3,798,498	+		LRK53_RS17275	0.31	-1.5
3,798,498	+		LRK53_RS17275	0.31	-0.3
3,798,498	+		LRK53_RS17275	0.31	-0.5
3,798,499	-		LRK53_RS17275	0.31	-0.4
3,798,499	-		LRK53_RS17275	0.31	-1.1