Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14165

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
3,109,361	+		LRK53_RS14160	0.45	+0.1
3,109,361	+		LRK53_RS14160	0.45	+0.1
3,109,361	+		LRK53_RS14160	0.45	-1.7
3,109,361	+		LRK53_RS14160	0.45	+1.7
3,109,361	+		LRK53_RS14160	0.45	-1.9
3,109,361	+		LRK53_RS14160	0.45	-2.1
3,109,361	+		LRK53_RS14160	0.45	-0.2
3,109,361	+		LRK53_RS14160	0.45	+0.2
3,109,361	+		LRK53_RS14160	0.45	-0.4
3,109,361	+		LRK53_RS14160	0.45	-0.4
3,109,361	+		LRK53_RS14160	0.45	-1.0
3,109,362	-		LRK53_RS14160	0.45	-1.4
3,109,362	-		LRK53_RS14160	0.45	-1.0
3,109,362	-		LRK53_RS14160	0.45	-2.2
3,109,362	-		LRK53_RS14160	0.45	-1.6
3,109,362	-		LRK53_RS14160	0.45	-1.4
3,109,362	-		LRK53_RS14160	0.45	-0.9
3,109,362	-		LRK53_RS14160	0.45	-0.9
3,109,362	-		LRK53_RS14160	0.45	-1.2
3,109,362	-		LRK53_RS14160	0.45	-1.4
3,109,362	-		LRK53_RS14160	0.45	+0.3
3,109,362	-		LRK53_RS14160	0.45	-0.5
3,109,362	-		LRK53_RS14160	0.45	-0.3
3,109,439	+		LRK53_RS14160	0.51	-0.3
3,109,440	-		LRK53_RS14160	0.51	-0.7
3,109,802	+		LRK53_RS14160	0.80	+0.6
3,109,802	+		LRK53_RS14160	0.80	-0.5
3,109,802	+		LRK53_RS14160	0.80	-0.2
3,109,802	+		LRK53_RS14160	0.80	+2.8
3,109,802	+		LRK53_RS14160	0.80	+0.6
3,109,802	+		LRK53_RS14160	0.80	-0.4
3,109,802	+		LRK53_RS14160	0.80	-0.7
3,109,802	+		LRK53_RS14160	0.80	-0.2
3,109,802	+		LRK53_RS14160	0.80	-1.7
3,109,802	+		LRK53_RS14160	0.80	-0.7
3,109,802	+		LRK53_RS14160	0.80	-1.5
3,109,802	+		LRK53_RS14160	0.80	-0.0
3,109,803	-		LRK53_RS14160	0.80	+0.3
3,109,803	-		LRK53_RS14160	0.80	-1.7
3,109,803	-		LRK53_RS14160	0.80	-0.2
3,109,803	-		LRK53_RS14160	0.80	-0.0
3,109,883	+		LRK53_RS14160	0.86	-0.6
3,109,883	+		LRK53_RS14160	0.86	-1.3
3,109,883	+		LRK53_RS14160	0.86	-0.5
3,109,884	-		LRK53_RS14160	0.86	+0.2
3,109,884	-		LRK53_RS14160	0.86	+0.6
3,109,884	-		LRK53_RS14160	0.86	-0.2
3,109,884	-		LRK53_RS14160	0.86	-1.5
3,109,895	+		LRK53_RS14160	0.87	+0.6
3,109,895	+		LRK53_RS14160	0.87	-1.2
3,109,895	+		LRK53_RS14160	0.87	-2.7
3,109,895	+		LRK53_RS14160	0.87	+0.1
3,109,895	+		LRK53_RS14160	0.87	+0.7
3,109,896	-		LRK53_RS14160	0.87	-1.4
3,109,896	-		LRK53_RS14160	0.87	-1.9
3,109,896	-		LRK53_RS14160	0.87	-2.7
3,109,896	-		LRK53_RS14160	0.87	-0.1
3,109,896	-		LRK53_RS14160	0.87	+0.6
3,110,090	+				+1.5
3,110,090	+				-2.1
3,110,091	-				-1.4
3,110,092	+				-1.7
3,110,092	+				-0.7
3,110,092	+				+0.8
3,110,092	+				+0.8
3,110,092	+				-0.4
3,110,092	+				-1.7
3,110,092	+				-0.4
3,110,092	+				-0.5
3,110,092	+				-1.2
3,110,092	+				-0.3
3,110,093	-				-0.6
3,110,093	-				-1.0
3,110,093	-				-1.9
3,110,093	-				-2.1
3,110,093	-				-1.4
3,110,093	-				-2.1
3,110,093	-				-0.4
3,110,093	-				-2.1
3,110,093	-				-0.8
3,110,093	-				+1.1
3,110,093	-				-0.5
3,110,093	-				-1.4
3,110,130	+				-0.0
3,110,130	+				-0.1
3,110,131	-				+2.2
3,110,131	-				-0.2
3,110,553	+		LRK53_RS14165	0.63	+1.9
3,110,553	+		LRK53_RS14165	0.63	-0.7
3,110,554	-		LRK53_RS14165	0.64	+0.4
3,110,596	+		LRK53_RS14165	0.74	+0.1
3,110,596	+		LRK53_RS14165	0.74	-1.1
3,110,596	+		LRK53_RS14165	0.74	+1.2
3,110,596	+		LRK53_RS14165	0.74	-0.7
3,110,596	+		LRK53_RS14165	0.74	+0.4
3,110,596	+		LRK53_RS14165	0.74	-0.9
3,110,596	+		LRK53_RS14165	0.74	+2.2
3,110,596	+		LRK53_RS14165	0.74	+0.6
3,110,596	+		LRK53_RS14165	0.74	-0.9
3,110,596	+		LRK53_RS14165	0.74	-1.3
3,110,596	+		LRK53_RS14165	0.74	-0.6
3,110,596	+		LRK53_RS14165	0.74	+0.5
3,110,596	+		LRK53_RS14165	0.74	-1.9
3,110,596	+		LRK53_RS14165	0.74	+0.2
3,110,596	+		LRK53_RS14165	0.74	-0.6
3,110,596	+		LRK53_RS14165	0.74	-0.9
3,110,596	+		LRK53_RS14165	0.74	-1.5
3,110,596	+		LRK53_RS14165	0.74	-1.1
3,110,596	+		LRK53_RS14165	0.74	-2.4
3,110,596	+		LRK53_RS14165	0.74	+2.1
3,110,596	+		LRK53_RS14165	0.74	-0.1
3,110,596	+		LRK53_RS14165	0.74	-1.0
3,110,597	-		LRK53_RS14165	0.75	-1.8
3,110,597	-		LRK53_RS14165	0.75	-1.1
3,110,597	-		LRK53_RS14165	0.75	-0.7
3,110,597	-		LRK53_RS14165	0.75	-1.0
3,110,597	-		LRK53_RS14165	0.75	-0.1
3,110,597	-		LRK53_RS14165	0.75	-1.3
3,110,597	-		LRK53_RS14165	0.75	-0.0
3,110,597	-		LRK53_RS14165	0.75	-1.9
3,110,597	-		LRK53_RS14165	0.75	-0.5
3,110,597	-		LRK53_RS14165	0.75	+0.1
3,110,597	-		LRK53_RS14165	0.75	-3.3
3,110,597	-		LRK53_RS14165	0.75	-0.4
3,110,597	-		LRK53_RS14165	0.75	-1.1
3,110,597	-		LRK53_RS14165	0.75	-0.2
3,110,597	-		LRK53_RS14165	0.75	-0.7
3,110,597	-		LRK53_RS14165	0.75	-1.0
3,110,597	-		LRK53_RS14165	0.75	-0.7
3,110,597	-		LRK53_RS14165	0.75	-0.6
3,110,597	-		LRK53_RS14165	0.75	+0.7
3,110,752	+		LRK53_RS14170	0.12	-0.9
3,110,752	+		LRK53_RS14170	0.12	-0.9
3,110,752	+		LRK53_RS14170	0.12	-0.2
3,110,752	+		LRK53_RS14170	0.12	+1.4
3,110,752	+		LRK53_RS14170	0.12	-1.0
3,110,752	+		LRK53_RS14170	0.12	-0.4
3,110,752	+		LRK53_RS14170	0.12	-0.4
3,110,752	+		LRK53_RS14170	0.12	-0.9
3,110,752	+		LRK53_RS14170	0.12	+0.7
3,110,753	-		LRK53_RS14170	0.13	-3.6
3,110,753	-		LRK53_RS14170	0.13	-1.9
3,110,753	-		LRK53_RS14170	0.13	+0.2
3,110,753	-		LRK53_RS14170	0.13	+0.6
3,110,753	-		LRK53_RS14170	0.13	-0.1
3,111,004	+		LRK53_RS14170	0.87	-0.7
3,111,004	+		LRK53_RS14170	0.87	-1.1
3,111,004	+		LRK53_RS14170	0.87	-1.6
3,111,004	+		LRK53_RS14170	0.87	-0.4
3,111,004	+		LRK53_RS14170	0.87	+0.7
3,111,004	+		LRK53_RS14170	0.87	-1.3
3,111,004	+		LRK53_RS14170	0.87	-1.8
3,111,004	+		LRK53_RS14170	0.87	-0.5
3,111,004	+		LRK53_RS14170	0.87	-1.4
3,111,004	+		LRK53_RS14170	0.87	-1.0
3,111,004	+		LRK53_RS14170	0.87	+1.1
3,111,004	+		LRK53_RS14170	0.87	-0.7
3,111,004	+		LRK53_RS14170	0.87	-1.1
3,111,004	+		LRK53_RS14170	0.87	-1.0
3,111,004	+		LRK53_RS14170	0.87	-0.4
3,111,004	+		LRK53_RS14170	0.87	-0.0
3,111,004	+		LRK53_RS14170	0.87	-0.2
3,111,004	+		LRK53_RS14170	0.87	-0.6
3,111,004	+		LRK53_RS14170	0.87	+0.6
3,111,004	+		LRK53_RS14170	0.87	+0.3
3,111,004	+		LRK53_RS14170	0.87	+0.1
3,111,004	+		LRK53_RS14170	0.87	-0.8
3,111,004	+		LRK53_RS14170	0.87	-1.2
3,111,004	+		LRK53_RS14170	0.87	-2.7
3,111,004	+		LRK53_RS14170	0.87	+0.8
3,111,004	+		LRK53_RS14170	0.87	-1.1
3,111,004	+		LRK53_RS14170	0.87	+0.0
3,111,004	+		LRK53_RS14170	0.87	-2.1
3,111,004	+		LRK53_RS14170	0.87	-0.4
3,111,004	+		LRK53_RS14170	0.87	-2.0
3,111,004	+		LRK53_RS14170	0.87	-1.2
3,111,004	+		LRK53_RS14170	0.87	+0.1
3,111,004	+		LRK53_RS14170	0.87	-2.1
3,111,004	+		LRK53_RS14170	0.87	-0.7
3,111,004	+		LRK53_RS14170	0.87	-1.5
3,111,004	+		LRK53_RS14170	0.87	-1.7
3,111,004	+		LRK53_RS14170	0.87	-3.4
3,111,004	+		LRK53_RS14170	0.87	-0.8
3,111,004	+		LRK53_RS14170	0.87	-1.4
3,111,004	+		LRK53_RS14170	0.87	-1.0
3,111,004	+		LRK53_RS14170	0.87	-0.1
3,111,004	+		LRK53_RS14170	0.87	-0.6
3,111,004	+		LRK53_RS14170	0.87	-1.4
3,111,004	+		LRK53_RS14170	0.87	+1.3
3,111,004	+		LRK53_RS14170	0.87	-0.7
3,111,004	+		LRK53_RS14170	0.87	-2.0
3,111,004	+		LRK53_RS14170	0.87	-1.0
3,111,004	+		LRK53_RS14170	0.87	+0.6
3,111,004	+		LRK53_RS14170	0.87	-1.6
3,111,004	+		LRK53_RS14170	0.87	+0.3
3,111,004	+		LRK53_RS14170	0.87	+1.0
3,111,004	+		LRK53_RS14170	0.87	-0.0
3,111,004	+		LRK53_RS14170	0.87	+0.8
3,111,004	+		LRK53_RS14170	0.87	-0.8
3,111,004	+		LRK53_RS14170	0.87	+0.0
3,111,004	+		LRK53_RS14170	0.87	-0.0
3,111,005	+		LRK53_RS14170	0.87	+0.5
3,111,005	-		LRK53_RS14170	0.87	-0.7
3,111,005	-		LRK53_RS14170	0.87	-1.5
3,111,005	-		LRK53_RS14170	0.87	-0.4
3,111,005	-		LRK53_RS14170	0.87	-1.0
3,111,005	-		LRK53_RS14170	0.87	+1.9
3,111,005	-		LRK53_RS14170	0.87	-2.3
3,111,005	-		LRK53_RS14170	0.87	-2.0
3,111,005	-		LRK53_RS14170	0.87	-1.2
3,111,005	-		LRK53_RS14170	0.87	-0.8
3,111,005	-		LRK53_RS14170	0.87	-2.2
3,111,005	-		LRK53_RS14170	0.87	-0.6
3,111,005	-		LRK53_RS14170	0.87	-1.4
3,111,005	-		LRK53_RS14170	0.87	-0.1
3,111,005	-		LRK53_RS14170	0.87	-0.6
3,111,005	-		LRK53_RS14170	0.87	+0.1
3,111,005	-		LRK53_RS14170	0.87	+1.2
3,111,005	-		LRK53_RS14170	0.87	+1.0
3,111,005	-		LRK53_RS14170	0.87	+0.3
3,111,005	-		LRK53_RS14170	0.87	-1.7
3,111,005	-		LRK53_RS14170	0.87	-0.2
3,111,005	-		LRK53_RS14170	0.87	-1.9
3,111,005	-		LRK53_RS14170	0.87	-1.3
3,111,005	-		LRK53_RS14170	0.87	+0.0
3,111,005	-		LRK53_RS14170	0.87	-0.5
3,111,005	-		LRK53_RS14170	0.87	-0.8
3,111,005	-		LRK53_RS14170	0.87	-1.4
3,111,005	-		LRK53_RS14170	0.87	-2.1
3,111,005	-		LRK53_RS14170	0.87	-0.7
3,111,005	-		LRK53_RS14170	0.87	+0.7
3,111,005	-		LRK53_RS14170	0.87	+1.2
3,111,005	-		LRK53_RS14170	0.87	-0.7
3,111,005	-		LRK53_RS14170	0.87	+0.4
3,111,005	-		LRK53_RS14170	0.87	+1.5
3,111,005	-		LRK53_RS14170	0.87	-1.1
3,111,005	-		LRK53_RS14170	0.87	-2.0
3,111,005	-		LRK53_RS14170	0.87	-0.9
3,111,005	-		LRK53_RS14170	0.87	-0.7
3,111,005	-		LRK53_RS14170	0.87	+0.1
3,111,005	-		LRK53_RS14170	0.87	+0.1
3,111,005	-		LRK53_RS14170	0.87	-1.7
3,111,005	-		LRK53_RS14170	0.87	-0.1
3,111,005	-		LRK53_RS14170	0.87	-0.7
3,111,005	-		LRK53_RS14170	0.87	-0.5
3,111,005	-		LRK53_RS14170	0.87	-0.1
3,111,005	-		LRK53_RS14170	0.87	-1.5
3,111,005	-		LRK53_RS14170	0.87	-2.1
3,111,005	-		LRK53_RS14170	0.87	-0.4
3,111,005	-		LRK53_RS14170	0.87	-1.3
3,111,005	-		LRK53_RS14170	0.87	+1.3
3,111,005	-		LRK53_RS14170	0.87	-1.7
3,111,005	-		LRK53_RS14170	0.87	+0.1
3,111,010	+		LRK53_RS14170	0.88	+0.6
3,111,010	+		LRK53_RS14170	0.88	+0.1
3,111,010	+		LRK53_RS14170	0.88	-0.2
3,111,010	+		LRK53_RS14170	0.88	+0.4
3,111,011	-		LRK53_RS14170	0.89	-0.6
3,111,011	-		LRK53_RS14170	0.89	-1.6
3,111,011	-		LRK53_RS14170	0.89	-0.6
3,111,011	-		LRK53_RS14170	0.89	-0.1
3,111,011	-		LRK53_RS14170	0.89	-0.4
3,111,033	-				-0.6
3,111,066	-				-1.0
3,111,066	-				-0.3
3,111,066	-				+0.2
3,111,189	+				-1.7
3,111,189	+				+0.4
3,111,190	-				-0.7
3,111,234	+		LRK53_RS14175	0.14	+0.7
3,111,234	+		LRK53_RS14175	0.14	-0.3
3,111,234	+		LRK53_RS14175	0.14	+0.8
3,111,234	+		LRK53_RS14175	0.14	-0.2
3,111,234	+		LRK53_RS14175	0.14	-0.4
3,111,234	+		LRK53_RS14175	0.14	-1.0
3,111,234	+		LRK53_RS14175	0.14	-1.8
3,111,234	+		LRK53_RS14175	0.14	-1.3
3,111,234	+		LRK53_RS14175	0.14	-0.2
3,111,234	+		LRK53_RS14175	0.14	+1.0
3,111,234	+		LRK53_RS14175	0.14	+0.2
3,111,234	+		LRK53_RS14175	0.14	+0.1
3,111,234	+		LRK53_RS14175	0.14	+0.2
3,111,234	+		LRK53_RS14175	0.14	-0.0
3,111,234	+		LRK53_RS14175	0.14	-0.4
3,111,234	+		LRK53_RS14175	0.14	-2.2
3,111,234	+		LRK53_RS14175	0.14	-1.2
3,111,234	+		LRK53_RS14175	0.14	-0.9
3,111,235	-		LRK53_RS14175	0.14	-0.9
3,111,235	-		LRK53_RS14175	0.14	-1.6
3,111,235	-		LRK53_RS14175	0.14	-0.6
3,111,235	-		LRK53_RS14175	0.14	-0.2
3,111,235	-		LRK53_RS14175	0.14	-2.1
3,111,406	-		LRK53_RS14175	0.29	-1.7
3,111,406	-		LRK53_RS14175	0.29	-1.0
3,111,406	-		LRK53_RS14175	0.29	+0.6
3,111,406	-		LRK53_RS14175	0.29	+0.5
3,111,406	-		LRK53_RS14175	0.29	+0.3
3,111,456	+		LRK53_RS14175	0.34	-0.1
3,111,456	+		LRK53_RS14175	0.34	-1.3
3,111,456	+		LRK53_RS14175	0.34	+0.7
3,111,456	+		LRK53_RS14175	0.34	-0.1
3,111,456	+		LRK53_RS14175	0.34	+1.2
3,111,456	+		LRK53_RS14175	0.34	-1.9
3,111,456	+		LRK53_RS14175	0.34	-1.2
3,111,457	-		LRK53_RS14175	0.34	-0.7
3,111,457	-		LRK53_RS14175	0.34	-0.2
3,111,457	-		LRK53_RS14175	0.34	-0.8
3,111,457	-		LRK53_RS14175	0.34	-1.5
3,111,457	-		LRK53_RS14175	0.34	-0.5
3,111,457	-		LRK53_RS14175	0.34	+0.2
3,111,457	-		LRK53_RS14175	0.34	-0.3
3,111,597	+		LRK53_RS14175	0.46	-0.7
3,111,597	+		LRK53_RS14175	0.46	-1.4
3,111,597	+		LRK53_RS14175	0.46	-0.4
3,111,597	+		LRK53_RS14175	0.46	+1.1
3,111,598	-		LRK53_RS14175	0.46	+0.5
3,111,598	-		LRK53_RS14175	0.46	-1.6
3,111,612	+		LRK53_RS14175	0.47	-0.4
3,111,661	-		LRK53_RS14175	0.52	-1.4