Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13255

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
2,920,381	+		LRK53_RS13250	0.32	+0.2
2,920,381	+		LRK53_RS13250	0.32	+0.0
2,920,381	+		LRK53_RS13250	0.32	-1.4
2,920,381	+		LRK53_RS13250	0.32	+0.6
2,920,381	+		LRK53_RS13250	0.32	-0.2
2,920,381	+		LRK53_RS13250	0.32	-0.6
2,920,382	-		LRK53_RS13250	0.33	-0.4
2,920,382	-		LRK53_RS13250	0.33	-0.2
2,920,382	-		LRK53_RS13250	0.33	-2.0
2,920,382	-		LRK53_RS13250	0.33	-0.2
2,920,382	-		LRK53_RS13250	0.33	-1.0
2,920,645	+		LRK53_RS13250	0.54	+1.4
2,920,645	+		LRK53_RS13250	0.54	+0.1
2,920,687	+		LRK53_RS13250	0.57	+0.5
2,920,687	+		LRK53_RS13250	0.57	+0.6
2,920,687	+		LRK53_RS13250	0.57	-1.4
2,920,687	+		LRK53_RS13250	0.57	-0.3
2,920,687	+		LRK53_RS13250	0.57	+0.8
2,920,687	+		LRK53_RS13250	0.57	-0.5
2,920,687	+		LRK53_RS13250	0.57	-0.2
2,920,687	+		LRK53_RS13250	0.57	-0.5
2,920,687	+		LRK53_RS13250	0.57	-1.4
2,920,687	+		LRK53_RS13250	0.57	+1.5
2,920,687	+		LRK53_RS13250	0.57	+1.5
2,920,687	+		LRK53_RS13250	0.57	-0.9
2,920,687	+		LRK53_RS13250	0.57	+0.9
2,920,688	-		LRK53_RS13250	0.57	-1.7
2,920,688	-		LRK53_RS13250	0.57	-0.3
2,920,688	-		LRK53_RS13250	0.57	+1.8
2,920,688	-		LRK53_RS13250	0.57	-0.2
2,920,688	-		LRK53_RS13250	0.57	-0.7
2,920,688	-		LRK53_RS13250	0.57	+0.1
2,920,817	+		LRK53_RS13250	0.68	+1.1
2,920,817	+		LRK53_RS13250	0.68	-0.2
2,920,817	+		LRK53_RS13250	0.68	+1.2
2,920,817	+		LRK53_RS13250	0.68	-3.3
2,920,817	+		LRK53_RS13250	0.68	+1.2
2,920,817	+		LRK53_RS13250	0.68	-1.1
2,920,817	+		LRK53_RS13250	0.68	-0.3
2,920,817	+		LRK53_RS13250	0.68	+0.3
2,920,817	+		LRK53_RS13250	0.68	-0.3
2,920,817	+		LRK53_RS13250	0.68	-1.0
2,920,817	+		LRK53_RS13250	0.68	-0.8
2,920,817	+		LRK53_RS13250	0.68	+2.1
2,920,817	+		LRK53_RS13250	0.68	-0.1
2,920,818	-		LRK53_RS13250	0.68	-1.8
2,920,818	-		LRK53_RS13250	0.68	+0.9
2,920,891	+		LRK53_RS13250	0.74	+0.6
2,920,891	+		LRK53_RS13250	0.74	+0.1
2,920,921	+		LRK53_RS13250	0.76	+0.2
2,920,922	-		LRK53_RS13250	0.76	-0.4
2,920,979	+		LRK53_RS13250	0.81	+0.4
2,921,093	-		LRK53_RS13250	0.90	-2.5
2,921,141	+				+0.1
2,921,141	+				-0.3
2,921,141	+				+0.7
2,921,141	+				-1.5
2,921,142	-				+0.8
2,921,142	-				-0.1
2,921,142	-				-0.4
2,921,322	+				-0.9
2,921,322	+				+1.9
2,921,323	-				-0.4
2,921,386	-		LRK53_RS13255	0.18	+0.1
2,921,607	+		LRK53_RS13255	0.81	-2.0
2,921,607	+		LRK53_RS13255	0.81	-0.3
2,921,607	+		LRK53_RS13255	0.81	-0.9
2,921,608	-		LRK53_RS13255	0.81	-0.6
2,921,608	-		LRK53_RS13255	0.81	+0.1
2,921,631	+		LRK53_RS13255	0.88	+0.1
2,921,631	+		LRK53_RS13255	0.88	+0.6
2,921,631	+		LRK53_RS13255	0.88	-1.1
2,921,631	+		LRK53_RS13255	0.88	+1.9
2,921,631	+		LRK53_RS13255	0.88	-0.2
2,921,631	+		LRK53_RS13255	0.88	+1.4
2,921,632	-		LRK53_RS13255	0.88	+2.1
2,921,632	-		LRK53_RS13255	0.88	+0.6
2,921,632	-		LRK53_RS13255	0.88	+0.1
2,921,632	-		LRK53_RS13255	0.88	+1.5
2,921,632	-		LRK53_RS13255	0.88	+1.7
2,921,632	-		LRK53_RS13255	0.88	-0.2
2,921,634	+		LRK53_RS13255	0.88	+0.1
2,921,634	+		LRK53_RS13255	0.88	-1.9
2,921,634	+		LRK53_RS13255	0.88	+1.9
2,921,634	+		LRK53_RS13255	0.88	-2.9
2,921,635	-		LRK53_RS13255	0.89	-2.2
2,921,700	+				+0.9
2,921,700	+				+0.4
2,921,700	+				+1.0
2,921,701	-				+2.9
2,921,701	-				-1.7
2,921,701	-				-0.4
2,921,701	-				-1.1
2,921,701	-				+0.5
2,921,919	+				+0.4
2,921,919	+				-2.0
2,921,920	-				-1.7
2,921,945	+				+0.4
2,921,945	+				-1.2
2,921,945	+				-0.9
2,921,945	+				-1.1
2,921,945	+				-1.2
2,921,945	+				+0.3
2,921,945	+				-2.7
2,921,945	+				+2.0
2,921,945	+				+0.9
2,921,945	+				-0.3
2,921,945	+				+0.1
2,921,946	-				-0.4
2,921,946	-				-0.9
2,921,946	-				+0.1
2,921,946	-				-2.4
2,921,946	-				+0.3
2,921,946	-				-1.9
2,921,946	-				-0.2
2,921,946	-				+0.9
2,921,946	-				+0.1
2,921,946	-				+0.6
2,921,946	-				-0.5
2,921,947	+				-0.9
2,921,947	+				-1.3
2,921,947	+				+1.6
2,921,947	+				-0.4
2,921,947	+				+2.9
2,921,947	+				-2.2
2,921,947	+				+0.1
2,921,947	+				+0.2
2,921,947	+				-0.1
2,921,947	+				+0.1
2,921,947	+				-0.9
2,921,947	+				-1.0
2,921,947	+				-0.4
2,921,947	+				-0.9
2,921,947	+				-0.6
2,921,947	+				-0.9
2,921,947	+				-0.6
2,921,947	+				-0.9
2,921,947	+				+0.9
2,921,947	+				-1.6
2,921,947	+				-1.3
2,921,947	+				+0.4
2,921,948	-				-0.4
2,921,948	-				+1.1
2,921,948	-				-1.7
2,921,948	-				-0.9
2,921,948	-				+0.6
2,921,948	-				-0.4
2,921,948	-				+0.3
2,921,948	-				+1.8
2,921,948	-				+0.4
2,921,948	-				-1.5
2,921,948	-				-0.9
2,921,948	-				-2.1
2,921,948	-				+0.4
2,921,948	-				+2.3
2,921,948	-				-1.0
2,921,948	-				+0.5
2,921,948	-				-1.6
2,921,948	-				+0.6
2,921,948	-				-0.0
2,921,948	-				-0.8
2,921,948	-				+0.6
2,921,948	-				-0.7
2,921,948	-				-1.3
2,921,948	-				-1.3
2,921,948	-				-0.8
2,921,948	-				-0.4
2,921,948	-				-1.1
2,921,948	-				-0.6
2,921,948	-				-1.4
2,921,948	-				-0.5
2,921,948	-				-1.4
2,921,948	-				+0.4
2,922,357	+		LRK53_RS13260	0.36	+0.1
2,922,357	+		LRK53_RS13260	0.36	+0.6
2,922,357	+		LRK53_RS13260	0.36	+1.4
2,922,357	+		LRK53_RS13260	0.36	+0.3
2,922,357	+		LRK53_RS13260	0.36	+2.4
2,922,619	+		LRK53_RS13260	0.62	-2.4