Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13035

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
2,879,201	-		LRK53_RS13025	0.26	-0.4
2,879,201	-		LRK53_RS13025	0.26	-0.5
2,879,201	-		LRK53_RS13025	0.26	+0.0
2,879,201	-		LRK53_RS13025	0.26	-0.3
2,879,201	-		LRK53_RS13025	0.26	+1.3
2,879,201	-		LRK53_RS13025	0.26	-0.4
2,879,219	+		LRK53_RS13025	0.28	+0.4
2,879,219	+		LRK53_RS13025	0.28	-1.7
2,879,220	-		LRK53_RS13025	0.28	+1.3
2,879,312	+		LRK53_RS13025	0.38	-0.6
2,879,312	+		LRK53_RS13025	0.38	+0.7
2,879,313	-		LRK53_RS13025	0.38	-0.3
2,879,313	-		LRK53_RS13025	0.38	+0.2
2,879,601	+		LRK53_RS13025	0.67	+2.3
2,879,602	-		LRK53_RS13025	0.68	+1.6
2,879,730	-		LRK53_RS13025	0.81	-1.7
2,879,730	-		LRK53_RS13025	0.81	-2.1
2,879,792	+		LRK53_RS13025	0.87	-0.3
2,879,834	+				-0.5
2,879,834	+				+0.9
2,879,834	+				-0.6
2,879,834	+				+1.0
2,879,834	+				+2.3
2,879,834	+				+0.6
2,879,834	+				+2.7
2,879,834	+				-1.9
2,879,835	-				-0.3
2,879,835	-				-1.1
2,879,835	-				+0.7
2,879,835	-				-0.4
2,879,835	-				+0.7
2,879,835	-				+1.4
2,879,835	-				+2.6
2,880,057	+		LRK53_RS13030	0.45	+0.3
2,880,057	+		LRK53_RS13030	0.45	+0.7
2,880,057	+		LRK53_RS13030	0.45	-0.8
2,880,057	+		LRK53_RS13030	0.45	-1.5
2,880,058	-		LRK53_RS13030	0.46	-1.2
2,880,067	+		LRK53_RS13030	0.49	-1.0
2,880,067	+		LRK53_RS13030	0.49	-0.7
2,880,068	-		LRK53_RS13030	0.50	-2.2
2,880,068	-		LRK53_RS13030	0.50	+0.0
2,880,068	-		LRK53_RS13030	0.50	+0.1
2,880,555	+		LRK53_RS13035	0.86	-1.2
2,880,555	+		LRK53_RS13035	0.86	-1.8
2,880,556	-		LRK53_RS13035	0.86	-1.3
2,880,556	-		LRK53_RS13035	0.86	-1.0
2,880,556	-		LRK53_RS13035	0.86	-0.8
2,880,556	-		LRK53_RS13035	0.86	-1.2
2,880,556	-		LRK53_RS13035	0.86	-1.2
2,880,556	-		LRK53_RS13035	0.86	-0.8
2,880,556	-		LRK53_RS13035	0.86	-0.6
2,880,632	-				-1.4
2,880,632	-				-0.7
2,880,671	+				-1.4
2,880,671	+				-2.1
2,880,672	-				-1.0
2,880,732	+				-3.4
2,880,732	+				-2.1
2,880,732	+				-0.4
2,880,732	+				-0.4
2,880,732	+				+0.5
2,880,732	+				+0.2
2,880,732	+				-0.7
2,880,732	+				-1.3
2,880,733	-				-1.3
2,880,733	-				-0.1
2,880,765	+				-0.8
2,880,765	+				-1.3
2,880,765	+				-1.8
2,880,765	+				-0.2
2,880,766	-				+1.4
2,880,766	-				+0.3
2,880,766	-				-1.5
2,880,777	+				+0.4
2,880,777	+				-2.4
2,880,777	+				-0.1
2,880,777	+				-1.1
2,880,777	+				-0.7
2,880,777	+				-0.6
2,880,777	+				-0.9
2,880,778	-				-0.6
2,880,876	+				-1.6
2,880,876	+				+0.7
2,880,876	+				-1.6
2,880,876	+				-2.0
2,880,877	-				-1.6
2,880,877	-				-0.6
2,880,877	-				-0.1
2,880,941	+				+0.4
2,880,941	+				+0.0
2,880,941	+				-0.4
2,880,941	+				-1.5
2,880,941	+				-2.0
2,880,941	+				-1.2
2,880,941	+				+1.3
2,880,941	+				-0.7
2,880,941	+				-1.9
2,880,941	+				-0.8
2,880,942	-				+1.2
2,880,942	-				-0.4
2,880,942	-				+0.7
2,880,942	-				-0.4
2,880,942	-				-1.8
2,880,942	-				+1.2
2,880,942	-				-1.7
2,880,942	-				+0.9
2,880,942	-				-0.5
2,880,948	+				-1.2
2,880,948	+				-0.5
2,880,948	+				-1.2
2,880,948	+				-0.6
2,880,948	+				-1.5
2,880,948	+				-1.1
2,880,949	-				+0.8
2,880,950	+				-1.7
2,880,950	+				+1.2
2,880,950	+				+0.8
2,880,950	+				-0.4
2,880,950	+				-0.6
2,880,950	+				-0.2
2,880,950	+				-1.6
2,880,950	+				+0.9
2,880,950	+				-1.2
2,880,950	+				+1.2
2,880,950	+				-2.2
2,880,950	+				-0.8
2,880,950	+				-1.4
2,880,950	+				-0.8
2,880,950	+				+1.8
2,880,951	-				-2.4
2,880,951	-				+1.9
2,880,951	-				+0.4
2,880,951	-				+0.2
2,880,951	-				+0.1
2,880,951	-				+1.0
2,880,951	-				+0.4
2,880,951	-				-0.5
2,880,951	-				+0.2
2,880,951	-				-1.7
2,880,951	-				+0.0
2,880,951	-				-0.6
2,880,951	-				+1.2
2,880,951	-				-0.8
2,880,951	-				-1.2
2,880,959	+				+0.1
2,880,959	+				-1.1
2,880,959	+				-0.2
2,880,959	+				-0.4
2,880,959	+				-1.0
2,880,959	+				-0.7
2,880,959	+				-0.7
2,880,959	+				-0.6
2,880,959	+				+2.2
2,880,959	+				-0.8
2,880,959	+				-2.8
2,880,959	+				-1.3
2,880,959	+				-0.5
2,880,959	+				+0.7
2,880,959	+				-1.3
2,880,959	+				-0.1
2,880,959	+				-0.4
2,880,959	+				-0.8
2,880,959	+				-0.2
2,880,959	+				-1.7
2,880,959	+				-2.7
2,880,959	+				-2.0
2,880,959	+				-0.2
2,880,959	+				-2.8
2,880,959	+				-0.1
2,880,959	+				-0.6
2,880,959	+				-0.1
2,880,959	+				-1.5
2,880,959	+				-1.8
2,880,959	+				+1.8
2,880,959	+				+0.0
2,880,959	+				-0.8
2,880,959	+				-1.6
2,880,959	+				+1.0
2,880,959	+				-0.7
2,880,959	+				-1.7
2,880,959	+				-2.2
2,880,959	+				-0.7
2,880,959	+				-0.8
2,880,959	+				-0.7
2,880,959	+				-2.0
2,880,959	+				+0.4
2,880,959	+				-0.2
2,880,959	+				-0.1
2,880,959	+				+1.9
2,880,959	+				-2.1
2,880,959	+				+0.0
2,880,959	+				+0.2
2,880,959	+				+0.2
2,880,960	-				-0.3
2,880,960	-				-1.3
2,880,960	-				+2.2
2,880,960	-				+0.4
2,880,960	-				+1.4
2,880,960	-				-1.2
2,880,960	-				-0.2
2,880,960	-				-1.2
2,880,960	-				-1.0
2,880,960	-				-0.2
2,880,960	-				-1.1
2,880,960	-				-2.2
2,880,960	-				-1.2
2,880,960	-				+0.2
2,880,960	-				-0.1
2,880,960	-				-0.1
2,880,960	-				-1.3
2,880,960	-				-0.6
2,880,960	-				+1.4
2,880,960	-				-2.5
2,880,960	-				-1.1
2,880,960	-				+1.9
2,880,960	-				-0.8
2,880,960	-				+2.0
2,880,960	-				-0.3
2,880,960	-				-2.0
2,880,960	-				+0.8
2,880,960	-				-0.9
2,880,960	-				+0.3
2,880,960	-				-0.7
2,880,960	-				-0.2
2,880,960	-				-1.2
2,880,960	-				-0.9
2,880,960	-				+0.3
2,880,960	-				-0.1
2,881,066	+				-1.3
2,881,066	+				-1.7
2,881,066	+				+0.6
2,881,066	+				-1.2
2,881,066	+				+0.4
2,881,066	+				-0.4
2,881,066	+				-1.6
2,881,066	+				-1.6
2,881,066	+				-0.5
2,881,066	+				-1.0
2,881,066	+				-0.9
2,881,066	+				-0.8
2,881,066	+				-1.5
2,881,066	+				-0.5
2,881,067	-				-0.3
2,881,067	-				+0.9
2,881,067	-				+1.2
2,881,067	-				+0.2
2,881,067	-				+0.8
2,881,067	-				-1.4
2,881,067	-				-2.3
2,881,067	-				+0.2
2,881,067	-				-0.1
2,881,067	-				-0.8
2,881,067	-				+0.3
2,881,067	-				-0.2
2,881,067	-				+1.5
2,881,067	-				+0.0
2,881,067	-				-0.1
2,881,067	-				-1.0
2,881,097	+				+1.3
2,881,097	+				+0.8
2,881,097	+				-0.4
2,881,097	+				+0.5
2,881,098	-				+1.5
2,881,098	-				-0.2
2,881,098	-				+0.6
2,881,098	-				-1.2
2,881,190	+				-0.2
2,881,190	+				-0.9
2,881,190	+				-0.2
2,881,190	+				+0.4
2,881,190	+				+0.1
2,881,190	+				-0.7
2,881,190	+				-0.1
2,881,190	+				-0.8
2,881,190	+				-2.1
2,881,190	+				-0.1
2,881,190	+				-1.0
2,881,190	+				+0.6
2,881,190	+				-0.7
2,881,190	+				-0.6
2,881,190	+				+0.4
2,881,190	+				-0.7
2,881,190	+				+0.5
2,881,190	+				-0.4
2,881,190	+				-1.2
2,881,190	+				-0.4
2,881,190	+				-0.1
2,881,190	+				-0.9
2,881,190	+				-0.8
2,881,190	+				-0.1
2,881,190	+				-0.1
2,881,190	+				+1.9
2,881,190	+				-1.0
2,881,190	+				-0.7
2,881,190	+				-1.0
2,881,190	+				+0.2
2,881,190	+				-0.8
2,881,190	+				-0.5
2,881,190	+				-0.6
2,881,190	+				-0.4
2,881,190	+				-2.1
2,881,190	+				-1.0
2,881,191	-				-2.6
2,881,191	-				+1.4
2,881,191	-				-0.6
2,881,191	-				+0.2
2,881,191	-				-0.4
2,881,191	-				-1.2
2,881,191	-				-0.8
2,881,191	-				-2.6
2,881,191	-				-0.2
2,881,191	-				-2.2
2,881,191	-				+0.2
2,881,191	-				-0.7
2,881,191	-				-1.2
2,881,191	-				+0.9
2,881,191	-				-1.6
2,881,191	-				+0.4
2,881,191	-				+2.8
2,881,191	-				-0.2
2,881,191	-				-1.1
2,881,191	-				-1.1
2,881,191	-				-0.1
2,881,191	-				-0.2
2,881,191	-				-2.4
2,881,191	-				-1.2
2,881,191	-				+0.8
2,881,191	-				-0.7
2,881,191	-				-0.1
2,881,191	-				-1.3
2,881,191	-				+0.8
2,881,226	+				+0.6
2,881,226	+				+1.1
2,881,226	+				-2.2
2,881,226	+				-1.3
2,881,226	+				+0.1
2,881,226	+				-0.7
2,881,226	+				-0.8
2,881,227	-				+0.4
2,881,227	-				+0.6
2,881,227	-				-2.0
2,881,227	-				-0.9
2,881,227	-				-2.1
2,881,227	-				+0.6
2,881,227	-				+0.8
2,881,292	+				-2.4
2,881,292	+				+0.4
2,881,292	+				-1.3
2,881,293	-				-0.8
2,881,293	-				+0.5
2,881,293	-				+0.8
2,881,293	-				-0.4
2,881,293	-				+0.8
2,881,293	-				-0.8
2,881,293	-				+1.0
2,881,293	-				-0.6
2,881,311	+				-0.5
2,881,311	+				-1.0
2,881,311	+				+0.1
2,881,311	+				-0.6
2,881,311	+				-1.2
2,881,311	+				+0.0
2,881,311	+				-2.3
2,881,311	+				-0.4
2,881,311	+				+0.6
2,881,311	+				+0.7
2,881,311	+				-0.2
2,881,311	+				-1.5
2,881,311	+				-1.4
2,881,311	+				+1.2
2,881,311	+				-0.4
2,881,311	+				-2.5
2,881,311	+				-0.8
2,881,311	+				-1.4
2,881,311	+				+0.3
2,881,311	+				-0.9
2,881,311	+				-1.0
2,881,311	+				-1.1
2,881,311	+				-1.8
2,881,311	+				-0.4
2,881,311	+				-1.0
2,881,311	+				+0.2
2,881,311	+				-0.9
2,881,312	-				+1.5
2,881,312	-				-0.5
2,881,312	-				-1.5
2,881,312	-				-2.6
2,881,312	-				-0.6
2,881,312	-				-0.4
2,881,312	-				-1.3
2,881,312	-				+1.6
2,881,312	-				-1.1
2,881,312	-				-0.4
2,881,312	-				-1.2
2,881,312	-				-0.1
2,881,312	-				-1.8
2,881,312	-				-1.2
2,881,312	-				-0.6
2,881,312	-				+1.0
2,881,312	-				+0.4
2,881,312	-				-2.6
2,881,312	-				-2.8
2,881,312	-				+0.2
2,881,464	+		LRK53_RS13040	0.82	-0.6
2,881,465	-		LRK53_RS13040	0.83	-0.1
2,881,470	+		LRK53_RS13040	0.86	-0.7
2,881,470	+		LRK53_RS13040	0.86	+0.8
2,881,470	+		LRK53_RS13040	0.86	+0.4
2,881,470	+		LRK53_RS13040	0.86	+0.9
2,881,470	+		LRK53_RS13040	0.86	-0.2
2,881,471	-		LRK53_RS13040	0.86	+1.2
2,881,471	-		LRK53_RS13040	0.86	-0.2
2,881,471	-		LRK53_RS13040	0.86	-2.9
2,881,471	-		LRK53_RS13040	0.86	+0.4
2,881,471	-		LRK53_RS13040	0.86	+0.3
2,881,471	-		LRK53_RS13040	0.86	-0.8
2,881,471	-		LRK53_RS13040	0.86	-1.0
2,881,471	-		LRK53_RS13040	0.86	-0.7
2,881,491	+				-1.0
2,881,492	-				-0.2
2,881,547	+				+0.4
2,881,547	+				-0.2