Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10255

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
2,290,430	+		LRK53_RS10245	0.51	+1.5
2,290,430	+		LRK53_RS10245	0.51	-1.0
2,290,430	+		LRK53_RS10245	0.51	-0.7
2,290,430	+		LRK53_RS10245	0.51	+2.7
2,290,431	-		LRK53_RS10245	0.51	-1.4
2,290,481	+		LRK53_RS10245	0.59	-1.3
2,290,481	+		LRK53_RS10245	0.59	+0.7
2,290,481	+		LRK53_RS10245	0.59	+1.1
2,290,481	+		LRK53_RS10245	0.59	-0.3
2,290,482	-		LRK53_RS10245	0.59	-1.3
2,290,482	-		LRK53_RS10245	0.59	+0.7
2,290,482	-		LRK53_RS10245	0.59	+0.7
2,290,482	-		LRK53_RS10245	0.59	-0.8
2,290,613	+		LRK53_RS10245	0.78	-1.7
2,290,613	+		LRK53_RS10245	0.78	-1.2
2,290,614	-		LRK53_RS10245	0.78	-1.3
2,290,614	-		LRK53_RS10245	0.78	+1.2
2,290,691	+		LRK53_RS10245	0.89	-0.6
2,290,692	-		LRK53_RS10245	0.89	-2.2
2,290,692	-		LRK53_RS10245	0.89	+2.0
2,290,692	-		LRK53_RS10245	0.89	-0.3
2,290,692	-		LRK53_RS10245	0.89	+0.7
2,290,692	-		LRK53_RS10245	0.89	-0.5
2,290,692	-		LRK53_RS10245	0.89	-0.6
2,290,692	-		LRK53_RS10245	0.89	-2.3
2,290,692	-		LRK53_RS10245	0.89	-0.3
2,290,763	+				-1.5
2,290,871	+		LRK53_RS10250	0.23	-0.7
2,290,871	+		LRK53_RS10250	0.23	-0.2
2,290,871	+		LRK53_RS10250	0.23	-1.6
2,290,995	+		LRK53_RS10250	0.52	-0.1
2,290,995	+		LRK53_RS10250	0.52	-0.6
2,290,995	+		LRK53_RS10250	0.52	-1.5
2,290,996	-		LRK53_RS10250	0.52	+3.2
2,290,996	-		LRK53_RS10250	0.52	-1.4
2,291,055	-		LRK53_RS10250	0.66	-1.1
2,291,213	+				-1.1
2,291,213	+				-2.1
2,291,213	+				+2.6
2,291,317	+		LRK53_RS10255	0.12	-0.2
2,291,347	+		LRK53_RS10255	0.15	+0.6
2,291,347	+		LRK53_RS10255	0.15	-0.2
2,291,347	+		LRK53_RS10255	0.15	-0.2
2,291,347	+		LRK53_RS10255	0.15	-1.6
2,291,347	+		LRK53_RS10255	0.15	-0.5
2,291,347	+		LRK53_RS10255	0.15	-1.4
2,291,347	+		LRK53_RS10255	0.15	-1.2
2,291,347	+		LRK53_RS10255	0.15	-1.7
2,291,348	-		LRK53_RS10255	0.15	-0.7
2,291,348	-		LRK53_RS10255	0.15	-1.8
2,291,348	-		LRK53_RS10255	0.15	+2.0
2,291,348	-		LRK53_RS10255	0.15	-0.5
2,291,348	-		LRK53_RS10255	0.15	-3.2
2,291,348	-		LRK53_RS10255	0.15	-1.2
2,291,348	-		LRK53_RS10255	0.15	-1.8
2,291,398	+		LRK53_RS10255	0.21	-0.4
2,291,398	+		LRK53_RS10255	0.21	+0.1
2,291,398	+		LRK53_RS10255	0.21	+1.2
2,291,398	+		LRK53_RS10255	0.21	-1.1
2,291,399	-		LRK53_RS10255	0.21	-2.2
2,291,399	-		LRK53_RS10255	0.21	-1.5
2,291,399	-		LRK53_RS10255	0.21	+0.6
2,291,399	-		LRK53_RS10255	0.21	-2.9
2,291,399	-		LRK53_RS10255	0.21	-0.2
2,291,507	+		LRK53_RS10255	0.32	-1.9
2,291,507	+		LRK53_RS10255	0.32	-0.8
2,291,508	-		LRK53_RS10255	0.32	-0.9
2,291,508	-		LRK53_RS10255	0.32	+0.1
2,291,508	-		LRK53_RS10255	0.32	-1.6
2,291,805	+		LRK53_RS10255	0.64	+0.1
2,291,806	-		LRK53_RS10255	0.64	-2.9
2,291,806	-		LRK53_RS10255	0.64	-0.9
2,291,977	+		LRK53_RS10255	0.82	-0.4
2,291,977	+		LRK53_RS10255	0.82	+1.1
2,291,977	+		LRK53_RS10255	0.82	-0.7
2,291,977	+		LRK53_RS10255	0.82	-1.5
2,291,977	+		LRK53_RS10255	0.82	-1.3
2,291,977	+		LRK53_RS10255	0.82	-0.2
2,291,978	-		LRK53_RS10255	0.82	-0.9
2,291,978	-		LRK53_RS10255	0.82	-2.3
2,291,978	-		LRK53_RS10255	0.82	-3.4
2,291,978	-		LRK53_RS10255	0.82	+0.5
2,291,978	-		LRK53_RS10255	0.82	+0.6
2,291,978	-		LRK53_RS10255	0.82	-1.2
2,291,978	-		LRK53_RS10255	0.82	-1.4
2,291,978	-		LRK53_RS10255	0.82	-0.8
2,292,028	+		LRK53_RS10255	0.88	-0.5
2,292,094	+				-1.9
2,292,095	-				+0.5
2,292,095	-				+0.9
2,292,095	-				-1.0
2,292,133	+				-0.9
2,292,133	+				-0.4
2,292,133	+				+0.7
2,292,133	+				-0.6
2,292,134	-				+0.6
2,292,134	-				-3.1
2,292,134	-				-0.5
2,292,363	+		LRK53_RS10260	0.45	-0.7
2,292,363	+		LRK53_RS10260	0.45	-0.9
2,292,363	+		LRK53_RS10260	0.45	-0.2
2,292,363	+		LRK53_RS10260	0.45	-0.4
2,292,364	-		LRK53_RS10260	0.46	+0.8
2,292,364	-		LRK53_RS10260	0.46	-3.2
2,292,364	-		LRK53_RS10260	0.46	-0.4
2,292,364	-		LRK53_RS10260	0.46	-0.6
2,292,830	+		LRK53_RS10265	0.14	-0.6
2,292,830	+		LRK53_RS10265	0.14	+1.0
2,292,831	-		LRK53_RS10265	0.14	-0.1
2,292,831	-		LRK53_RS10265	0.14	+2.8
2,292,923	-		LRK53_RS10265	0.20	-3.2
2,293,034	+		LRK53_RS10265	0.28	+1.2
2,293,034	+		LRK53_RS10265	0.28	-0.9
2,293,034	+		LRK53_RS10265	0.28	-0.9
2,293,034	+		LRK53_RS10265	0.28	+0.1
2,293,035	-		LRK53_RS10265	0.28	-0.5