Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08625

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
1,932,833	+		LRK53_RS08615	0.12	-0.7
1,932,833	+		LRK53_RS08615	0.12	-0.6
1,932,833	+		LRK53_RS08615	0.12	-0.4
1,932,833	+		LRK53_RS08615	0.12	-0.4
1,932,833	+		LRK53_RS08615	0.12	-1.8
1,932,834	-		LRK53_RS08615	0.12	-1.3
1,932,834	-		LRK53_RS08615	0.12	+0.2
1,932,834	-		LRK53_RS08615	0.12	-0.6
1,932,834	-		LRK53_RS08615	0.12	-0.6
1,932,834	-		LRK53_RS08615	0.12	-0.8
1,932,834	-		LRK53_RS08615	0.12	+0.2
1,932,834	-		LRK53_RS08615	0.12	+0.0
1,932,834	-		LRK53_RS08615	0.12	-1.4
1,932,890	+		LRK53_RS08615	0.23	+0.4
1,932,890	+		LRK53_RS08615	0.23	-1.7
1,932,890	+		LRK53_RS08615	0.23	-3.0
1,932,890	+		LRK53_RS08615	0.23	-1.4
1,932,890	+		LRK53_RS08615	0.23	+0.1
1,932,890	+		LRK53_RS08615	0.23	-1.2
1,932,890	+		LRK53_RS08615	0.23	-1.5
1,932,890	+		LRK53_RS08615	0.23	-0.1
1,932,890	+		LRK53_RS08615	0.23	-2.3
1,932,890	+		LRK53_RS08615	0.23	+0.2
1,932,890	+		LRK53_RS08615	0.23	-0.7
1,932,891	-		LRK53_RS08615	0.24	+0.6
1,932,891	-		LRK53_RS08615	0.24	-1.2
1,932,891	-		LRK53_RS08615	0.24	+0.0
1,932,891	-		LRK53_RS08615	0.24	-0.8
1,932,891	-		LRK53_RS08615	0.24	+0.1
1,932,891	-		LRK53_RS08615	0.24	-0.9
1,932,891	-		LRK53_RS08615	0.24	-1.9
1,932,891	-		LRK53_RS08615	0.24	-1.9
1,932,950	+		LRK53_RS08615	0.36	-0.6
1,932,950	+		LRK53_RS08615	0.36	-1.8
1,932,950	+		LRK53_RS08615	0.36	-0.9
1,932,950	+		LRK53_RS08615	0.36	+0.9
1,932,951	-		LRK53_RS08615	0.36	+0.5
1,933,154	+		LRK53_RS08615	0.77	-1.8
1,933,154	+		LRK53_RS08615	0.77	-1.2
1,933,154	+		LRK53_RS08615	0.77	+1.0
1,933,154	+		LRK53_RS08615	0.77	-2.8
1,933,154	+		LRK53_RS08615	0.77	-1.5
1,933,154	+		LRK53_RS08615	0.77	-1.1
1,933,155	-		LRK53_RS08615	0.77	-1.2
1,933,155	-		LRK53_RS08615	0.77	+1.4
1,933,155	-		LRK53_RS08615	0.77	-1.6
1,933,155	-		LRK53_RS08615	0.77	-3.3
1,933,155	-		LRK53_RS08615	0.77	-0.7
1,933,155	-		LRK53_RS08615	0.77	-3.0
1,933,178	+		LRK53_RS08615	0.81	+3.2
1,933,179	-		LRK53_RS08615	0.82	-0.2
1,933,202	+		LRK53_RS08615	0.86	+0.1
1,933,202	+		LRK53_RS08615	0.86	-0.2
1,933,202	+		LRK53_RS08615	0.86	-0.4
1,933,202	+		LRK53_RS08615	0.86	-2.3
1,933,202	+		LRK53_RS08615	0.86	-0.8
1,933,202	+		LRK53_RS08615	0.86	-0.1
1,933,202	+		LRK53_RS08615	0.86	+0.8
1,933,202	+		LRK53_RS08615	0.86	-1.3
1,933,202	+		LRK53_RS08615	0.86	-1.4
1,933,202	+		LRK53_RS08615	0.86	+0.1
1,933,202	+		LRK53_RS08615	0.86	+0.3
1,933,202	+		LRK53_RS08615	0.86	-0.7
1,933,202	+		LRK53_RS08615	0.86	-0.4
1,933,202	+		LRK53_RS08615	0.86	+0.9
1,933,202	+		LRK53_RS08615	0.86	-3.1
1,933,202	+		LRK53_RS08615	0.86	-0.2
1,933,202	+		LRK53_RS08615	0.86	-0.7
1,933,202	+		LRK53_RS08615	0.86	-1.2
1,933,202	+		LRK53_RS08615	0.86	-1.7
1,933,202	+		LRK53_RS08615	0.86	-2.5
1,933,202	+		LRK53_RS08615	0.86	-0.2
1,933,202	+		LRK53_RS08615	0.86	+1.4
1,933,203	-		LRK53_RS08615	0.86	-1.9
1,933,203	-		LRK53_RS08615	0.86	-0.3
1,933,203	-		LRK53_RS08615	0.86	-2.9
1,933,203	-		LRK53_RS08615	0.86	-0.8
1,933,203	-		LRK53_RS08615	0.86	-1.8
1,933,203	-		LRK53_RS08615	0.86	+0.7
1,933,203	-		LRK53_RS08615	0.86	-1.6
1,933,203	-		LRK53_RS08615	0.86	-0.7
1,933,203	-		LRK53_RS08615	0.86	-0.0
1,933,203	-		LRK53_RS08615	0.86	-1.4
1,933,203	-		LRK53_RS08615	0.86	-0.2
1,933,203	-		LRK53_RS08615	0.86	-0.7
1,933,203	-		LRK53_RS08615	0.86	-0.7
1,933,203	-		LRK53_RS08615	0.86	-0.3
1,933,203	-		LRK53_RS08615	0.86	+2.9
1,933,203	-		LRK53_RS08615	0.86	+0.8
1,933,203	-		LRK53_RS08615	0.86	-0.7
1,933,203	-		LRK53_RS08615	0.86	-2.1
1,933,203	-		LRK53_RS08615	0.86	-0.4
1,933,203	-		LRK53_RS08615	0.86	-0.9
1,933,203	-		LRK53_RS08615	0.86	-0.7
1,933,261	+				-1.2
1,933,261	+				+0.8
1,933,261	+				-1.4
1,933,261	+				-0.7
1,933,261	+				+0.3
1,933,261	+				-0.0
1,933,261	+				-1.4
1,933,261	+				+0.0
1,933,262	-				+0.4
1,933,262	-				-0.7
1,933,262	-				-3.3
1,933,262	-				-1.8
1,933,262	-				-0.5
1,933,262	-				-1.6
1,933,262	-				+0.2
1,933,269	-				+0.0
1,933,269	-				+1.4
1,933,323	+				-0.6
1,933,323	+				-1.0
1,933,351	+				-0.1
1,933,351	+				-1.0
1,933,351	+				+0.1
1,933,351	+				-0.9
1,933,351	+				-0.9
1,933,351	+				-3.2
1,933,351	+				-1.9
1,933,351	+				-0.6
1,933,351	+				-1.3
1,933,351	+				-0.1
1,933,352	-				-1.3
1,933,352	-				-0.6
1,933,363	+				-2.1
1,933,363	+				-1.9
1,933,363	+				-1.9
1,933,363	+				-0.0
1,933,364	-				-0.8
1,933,364	-				+1.2
1,933,364	-				-0.5
1,933,364	-				+2.3
1,933,397	-		LRK53_RS08620	0.17	-0.2
1,933,411	+		LRK53_RS08620	0.21	-0.9
1,933,426	+		LRK53_RS08620	0.24	-0.6
1,933,426	+		LRK53_RS08620	0.24	+2.2
1,933,426	+		LRK53_RS08620	0.24	+0.9
1,933,426	+		LRK53_RS08620	0.24	-0.5
1,933,427	-		LRK53_RS08620	0.25	+1.5
1,933,427	-		LRK53_RS08620	0.25	-0.1
1,933,468	+		LRK53_RS08620	0.35	-1.7
1,933,469	-		LRK53_RS08620	0.35	-1.2
1,933,469	-		LRK53_RS08620	0.35	-0.6
1,933,469	-		LRK53_RS08620	0.35	-0.8
1,933,643	-		LRK53_RS08620	0.79	-0.7
1,933,643	-		LRK53_RS08620	0.79	-1.3
1,933,643	-		LRK53_RS08620	0.79	-1.9
1,933,983	+				+0.8
1,933,983	+				-0.6
1,933,984	-				-0.4
1,933,984	-				-0.9
1,933,984	-				-1.0
1,933,984	-				-0.4
1,934,037	+				-2.2
1,934,037	+				-0.8
1,934,037	+				+0.4
1,934,037	+				-1.4
1,934,037	+				-0.2
1,934,037	+				-0.5
1,934,037	+				-0.8
1,934,037	+				-0.2
1,934,037	+				+1.2
1,934,211	-		LRK53_RS08625	0.16	-0.8
1,934,484	+		LRK53_RS08625	0.27	+0.1
1,934,895	+		LRK53_RS08625	0.44	+1.4
1,934,895	+		LRK53_RS08625	0.44	-0.0
1,934,895	+		LRK53_RS08625	0.44	+0.8
1,934,895	+		LRK53_RS08625	0.44	-0.1
1,934,895	+		LRK53_RS08625	0.44	+2.6
1,934,895	+		LRK53_RS08625	0.44	+0.0
1,934,895	+		LRK53_RS08625	0.44	-2.0
1,934,895	+		LRK53_RS08625	0.44	-0.2
1,934,895	+		LRK53_RS08625	0.44	-0.3
1,934,896	-		LRK53_RS08625	0.44	-0.6
1,934,896	-		LRK53_RS08625	0.44	+0.0
1,934,896	-		LRK53_RS08625	0.44	+0.2
1,934,896	-		LRK53_RS08625	0.44	+0.1
1,934,896	-		LRK53_RS08625	0.44	+1.0
1,934,896	-		LRK53_RS08625	0.44	-0.6
1,934,896	-		LRK53_RS08625	0.44	-1.9
1,935,033	-		LRK53_RS08625	0.50	-1.0
1,935,336	+		LRK53_RS08625	0.63	-0.8
1,935,336	+		LRK53_RS08625	0.63	+0.5
1,935,336	+		LRK53_RS08625	0.63	+0.1
1,935,337	-		LRK53_RS08625	0.63	-0.0
1,935,337	-		LRK53_RS08625	0.63	+0.4
1,935,337	-		LRK53_RS08625	0.63	-0.8
1,935,348	+		LRK53_RS08625	0.63	+0.2
1,935,348	+		LRK53_RS08625	0.63	-1.0
1,935,348	+		LRK53_RS08625	0.63	-0.5
1,935,348	+		LRK53_RS08625	0.63	+1.0
1,935,348	+		LRK53_RS08625	0.63	+0.2
1,935,348	+		LRK53_RS08625	0.63	-1.5
1,935,349	-		LRK53_RS08625	0.63	-0.8
1,935,349	-		LRK53_RS08625	0.63	+0.0
1,935,349	-		LRK53_RS08625	0.63	-0.4
1,935,349	-		LRK53_RS08625	0.63	-0.0
1,935,349	-		LRK53_RS08625	0.63	-1.1
1,935,349	-		LRK53_RS08625	0.63	-0.2
1,935,349	-		LRK53_RS08625	0.63	-0.4
1,935,349	-		LRK53_RS08625	0.63	-1.1
1,935,423	+		LRK53_RS08625	0.66	-1.3
1,935,423	+		LRK53_RS08625	0.66	-2.0
1,935,423	+		LRK53_RS08625	0.66	-0.1
1,935,575	+		LRK53_RS08625	0.73	-0.2
1,935,575	+		LRK53_RS08625	0.73	-1.3
1,935,576	-		LRK53_RS08625	0.73	-1.4
1,935,682	+		LRK53_RS08625	0.77	+0.8
1,935,682	+		LRK53_RS08625	0.77	+0.8
1,935,682	+		LRK53_RS08625	0.77	-0.7
1,935,682	+		LRK53_RS08625	0.77	+1.4
1,935,682	+		LRK53_RS08625	0.77	-1.6
1,935,682	+		LRK53_RS08625	0.77	-0.8
1,935,682	+		LRK53_RS08625	0.77	-0.3
1,935,683	-		LRK53_RS08625	0.77	-1.8
1,935,683	-		LRK53_RS08625	0.77	-0.4
1,935,683	-		LRK53_RS08625	0.77	-0.9
1,935,683	-		LRK53_RS08625	0.77	-0.4
1,935,683	-		LRK53_RS08625	0.77	+0.8
1,935,683	-		LRK53_RS08625	0.77	+0.2
1,936,420	+				+0.6
1,936,420	+				+0.1
1,936,420	+				-1.2
1,936,420	+				-0.2
1,936,420	+				+0.6
1,936,420	+				-1.1
1,936,421	-				-0.7
1,936,421	-				-0.8
1,936,421	-				-0.4
1,936,421	-				-0.2
1,936,421	-				+0.2
1,936,421	-				-0.0
1,936,421	-				-0.8
1,936,421	-				+0.9
1,936,421	-				-0.0
1,936,434	+				+0.3
1,936,555	-				+2.1
1,936,555	-				-1.5
1,936,563	+				-1.5
1,936,563	+				-0.8
1,936,563	+				+0.4
1,936,563	+				-2.0
1,936,563	+				-0.9
1,936,564	-				-1.7
1,936,842	+		LRK53_RS08630	0.20	-0.0
1,936,842	+		LRK53_RS08630	0.20	-0.7
1,936,843	-		LRK53_RS08630	0.20	-0.3
1,936,965	+		LRK53_RS08630	0.27	-1.4
1,936,965	+		LRK53_RS08630	0.27	-0.9
1,936,965	+		LRK53_RS08630	0.27	-0.6
1,936,965	+		LRK53_RS08630	0.27	-2.0
1,936,965	+		LRK53_RS08630	0.27	-0.9
1,936,965	+		LRK53_RS08630	0.27	-0.2
1,936,965	+		LRK53_RS08630	0.27	+0.2
1,936,965	+		LRK53_RS08630	0.27	+1.2
1,936,965	+		LRK53_RS08630	0.27	-3.8
1,936,966	-		LRK53_RS08630	0.27	-1.4
1,936,966	-		LRK53_RS08630	0.27	-0.7
1,936,966	-		LRK53_RS08630	0.27	-1.3
1,936,966	-		LRK53_RS08630	0.27	-1.2
1,936,966	-		LRK53_RS08630	0.27	+0.4
1,936,966	-		LRK53_RS08630	0.27	-1.2
1,936,966	-		LRK53_RS08630	0.27	+1.0
1,936,966	-		LRK53_RS08630	0.27	-1.9
1,936,966	-		LRK53_RS08630	0.27	-0.2
1,936,966	-		LRK53_RS08630	0.27	+0.9
1,936,966	-		LRK53_RS08630	0.27	-2.4
1,936,966	-		LRK53_RS08630	0.27	-0.0
1,936,966	-		LRK53_RS08630	0.27	-1.3
1,936,966	-		LRK53_RS08630	0.27	+0.1
1,936,978	-		LRK53_RS08630	0.27	-2.0
1,936,978	-		LRK53_RS08630	0.27	-0.0
1,936,978	-		LRK53_RS08630	0.27	+0.5
1,936,978	-		LRK53_RS08630	0.27	-2.1
1,936,978	-		LRK53_RS08630	0.27	+0.0
1,937,056	-		LRK53_RS08630	0.32	+0.3
1,937,056	-		LRK53_RS08630	0.32	-0.9
1,937,155	-		LRK53_RS08630	0.37	-1.7
1,937,208	+		LRK53_RS08630	0.40	-0.4
1,937,208	+		LRK53_RS08630	0.40	+0.9
1,937,208	+		LRK53_RS08630	0.40	+1.6
1,937,208	+		LRK53_RS08630	0.40	-0.2
1,937,208	+		LRK53_RS08630	0.40	-0.6
1,937,208	+		LRK53_RS08630	0.40	+1.8
1,937,208	+		LRK53_RS08630	0.40	-0.8
1,937,208	+		LRK53_RS08630	0.40	-1.4
1,937,208	+		LRK53_RS08630	0.40	+0.3
1,937,208	+		LRK53_RS08630	0.40	+1.3
1,937,208	+		LRK53_RS08630	0.40	-0.8
1,937,208	+		LRK53_RS08630	0.40	-1.7
1,937,208	+		LRK53_RS08630	0.40	-1.5
1,937,208	+		LRK53_RS08630	0.40	-0.8
1,937,208	+		LRK53_RS08630	0.40	-1.3
1,937,208	+		LRK53_RS08630	0.40	-0.6
1,937,208	+		LRK53_RS08630	0.40	-1.6
1,937,208	+		LRK53_RS08630	0.40	-0.1
1,937,208	+		LRK53_RS08630	0.40	-1.4
1,937,208	+		LRK53_RS08630	0.40	-2.0
1,937,208	+		LRK53_RS08630	0.40	-0.4
1,937,208	+		LRK53_RS08630	0.40	-0.0
1,937,208	+		LRK53_RS08630	0.40	-0.7
1,937,208	+		LRK53_RS08630	0.40	+0.2
1,937,209	-		LRK53_RS08630	0.40	-0.3
1,937,209	-		LRK53_RS08630	0.40	-1.0
1,937,209	-		LRK53_RS08630	0.40	-1.8
1,937,209	-		LRK53_RS08630	0.40	-0.0
1,937,209	-		LRK53_RS08630	0.40	-1.6
1,937,209	-		LRK53_RS08630	0.40	-1.2
1,937,209	-		LRK53_RS08630	0.40	+0.2
1,937,209	-		LRK53_RS08630	0.40	-0.1
1,937,209	-		LRK53_RS08630	0.40	-1.8
1,937,209	-		LRK53_RS08630	0.40	-0.8
1,937,209	-		LRK53_RS08630	0.40	-0.8
1,937,209	-		LRK53_RS08630	0.40	-0.5
1,937,209	-		LRK53_RS08630	0.40	+0.2
1,937,209	-		LRK53_RS08630	0.40	-0.9
1,937,209	-		LRK53_RS08630	0.40	-1.5
1,937,209	-		LRK53_RS08630	0.40	-0.5
1,937,209	-		LRK53_RS08630	0.40	+0.2
1,937,209	-		LRK53_RS08630	0.40	+0.8
1,937,209	-		LRK53_RS08630	0.40	-1.7
1,937,209	-		LRK53_RS08630	0.40	+2.0
1,937,209	-		LRK53_RS08630	0.40	-0.6