Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05930

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
1,369,519	+				+0.7
1,369,519	+				-0.2
1,369,519	+				-0.1
1,369,519	+				-0.1
1,369,519	+				-1.0
1,369,519	+				-1.2
1,369,519	+				+1.1
1,369,519	+				+1.9
1,369,519	+				+0.4
1,369,519	+				-2.5
1,369,519	+				-0.1
1,369,520	-				-1.3
1,369,520	-				+0.2
1,369,520	-				-1.6
1,369,520	-				+0.0
1,369,520	-				-0.8
1,369,777	+		LRK53_RS05925	0.33	-1.3
1,369,777	+		LRK53_RS05925	0.33	-1.2
1,369,778	-		LRK53_RS05925	0.33	-0.7
1,369,798	+		LRK53_RS05925	0.35	-0.1
1,370,045	-		LRK53_RS05925	0.64	+0.9
1,370,112	+		LRK53_RS05925	0.72	-1.6
1,370,112	+		LRK53_RS05925	0.72	-0.9
1,370,112	+		LRK53_RS05925	0.72	+1.6
1,370,112	+		LRK53_RS05925	0.72	-0.1
1,370,112	+		LRK53_RS05925	0.72	-0.9
1,370,112	+		LRK53_RS05925	0.72	-0.4
1,370,112	+		LRK53_RS05925	0.72	-1.6
1,370,112	+		LRK53_RS05925	0.72	+1.2
1,370,112	+		LRK53_RS05925	0.72	+1.3
1,370,112	+		LRK53_RS05925	0.72	-0.1
1,370,112	+		LRK53_RS05925	0.72	+0.6
1,370,112	+		LRK53_RS05925	0.72	-2.0
1,370,112	+		LRK53_RS05925	0.72	-0.2
1,370,112	+		LRK53_RS05925	0.72	-0.8
1,370,112	+		LRK53_RS05925	0.72	-0.7
1,370,112	+		LRK53_RS05925	0.72	-0.1
1,370,112	+		LRK53_RS05925	0.72	-0.8
1,370,112	+		LRK53_RS05925	0.72	+1.4
1,370,112	+		LRK53_RS05925	0.72	-1.5
1,370,112	+		LRK53_RS05925	0.72	-0.1
1,370,112	+		LRK53_RS05925	0.72	-0.4
1,370,113	-		LRK53_RS05925	0.72	+0.3
1,370,113	-		LRK53_RS05925	0.72	-2.5
1,370,113	-		LRK53_RS05925	0.72	-0.3
1,370,113	-		LRK53_RS05925	0.72	-0.8
1,370,113	-		LRK53_RS05925	0.72	+2.5
1,370,113	-		LRK53_RS05925	0.72	-0.2
1,370,113	-		LRK53_RS05925	0.72	-0.2
1,370,113	-		LRK53_RS05925	0.72	+0.1
1,370,113	-		LRK53_RS05925	0.72	+1.3
1,370,113	-		LRK53_RS05925	0.72	+0.6
1,370,113	-		LRK53_RS05925	0.72	+1.8
1,370,113	-		LRK53_RS05925	0.72	+0.7
1,370,113	-		LRK53_RS05925	0.72	-1.3
1,370,113	-		LRK53_RS05925	0.72	+0.6
1,370,307	+				-1.9
1,370,307	+				-0.2
1,370,308	-				-2.0
1,370,362	+				+0.1
1,370,403	+				-0.5
1,370,404	-				-0.9
1,370,585	+		LRK53_RS05930	0.39	+0.1
1,370,585	+		LRK53_RS05930	0.39	-1.4
1,370,585	+		LRK53_RS05930	0.39	+0.8
1,370,585	+		LRK53_RS05930	0.39	-1.5
1,370,586	-		LRK53_RS05930	0.39	-1.1
1,370,601	-		LRK53_RS05930	0.45	+3.4
1,370,663	+		LRK53_RS05930	0.67	-1.0
1,370,664	-		LRK53_RS05930	0.67	+0.6
1,370,716	-		LRK53_RS05930	0.86	+1.7
1,370,735	-				-1.2
1,370,766	-				+0.1
1,370,766	-				-1.1
1,371,149	+				+0.5
1,371,149	+				-1.5
1,371,149	+				-0.1
1,371,149	+				-1.9
1,371,149	+				-0.2
1,371,149	+				-0.1
1,371,149	+				+1.1
1,371,150	-				-0.4
1,371,150	-				-0.6
1,371,150	-				-0.1
1,371,150	-				+0.7
1,371,150	-				-0.7
1,371,150	-				+0.3
1,371,157	+				+0.1
1,371,158	-				+0.4
1,371,254	+		LRK53_RS05935	0.11	+0.6
1,371,254	+		LRK53_RS05935	0.11	+2.2
1,371,254	+		LRK53_RS05935	0.11	+0.1
1,371,419	+		LRK53_RS05935	0.24	-0.1
1,371,419	+		LRK53_RS05935	0.24	+0.1
1,371,419	+		LRK53_RS05935	0.24	-1.3
1,371,419	+		LRK53_RS05935	0.24	+0.3
1,371,420	-		LRK53_RS05935	0.24	+1.9
1,371,420	-		LRK53_RS05935	0.24	+0.2
1,371,420	-		LRK53_RS05935	0.24	+2.0
1,371,420	-		LRK53_RS05935	0.24	-0.7
1,371,662	+		LRK53_RS05935	0.43	+0.6
1,371,662	+		LRK53_RS05935	0.43	+1.1
1,371,662	+		LRK53_RS05935	0.43	+1.7
1,371,662	+		LRK53_RS05935	0.43	-2.1
1,371,663	-		LRK53_RS05935	0.43	-1.3
1,371,663	-		LRK53_RS05935	0.43	-1.0
1,371,663	-		LRK53_RS05935	0.43	-0.5
1,371,663	-		LRK53_RS05935	0.43	-0.8
1,371,663	-		LRK53_RS05935	0.43	+0.5
1,371,663	-		LRK53_RS05935	0.43	+0.6
1,371,663	-		LRK53_RS05935	0.43	-1.3
1,371,663	-		LRK53_RS05935	0.43	+1.6