Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05550

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
1,295,412	+		LRK53_RS05545	0.53	-0.8
1,295,412	+		LRK53_RS05545	0.53	-1.0
1,295,413	-		LRK53_RS05545	0.53	-0.2
1,295,609	+		LRK53_RS05545	0.67	-1.8
1,295,610	-		LRK53_RS05545	0.67	-2.2
1,295,696	+		LRK53_RS05545	0.74	-1.2
1,295,696	+		LRK53_RS05545	0.74	-0.5
1,295,696	+		LRK53_RS05545	0.74	-3.0
1,295,696	+		LRK53_RS05545	0.74	+0.9
1,295,697	-		LRK53_RS05545	0.74	+0.5
1,295,697	-		LRK53_RS05545	0.74	-0.9
1,295,697	-		LRK53_RS05545	0.74	-0.2
1,295,697	-		LRK53_RS05545	0.74	-0.1
1,295,918	+		LRK53_RS05545	0.90	+1.7
1,295,918	+		LRK53_RS05545	0.90	+0.9
1,295,918	+		LRK53_RS05545	0.90	-1.1
1,295,919	-		LRK53_RS05545	0.90	+0.5
1,295,919	-		LRK53_RS05545	0.90	+0.6
1,295,919	-		LRK53_RS05545	0.90	+1.1
1,295,919	-		LRK53_RS05545	0.90	-0.6
1,295,919	-		LRK53_RS05545	0.90	-1.4
1,295,919	-		LRK53_RS05545	0.90	+1.7
1,295,995	-				-1.8
1,295,995	-				+0.8
1,296,072	+				+0.6
1,296,072	+				-1.2
1,296,072	+				+1.1
1,296,072	+				+0.6
1,296,072	+				-1.1
1,296,072	+				-1.9
1,296,073	-				-1.0
1,296,073	-				-0.6
1,296,073	-				-2.6
1,296,073	-				-0.3
1,296,073	-				+0.2
1,296,073	-				-0.5
1,296,073	-				-1.1
1,296,074	+				-0.6
1,296,074	+				-0.7
1,296,074	+				-1.9
1,296,075	-				+0.4
1,296,075	-				-0.6
1,296,075	-				+0.6
1,296,075	-				-1.2
1,296,075	-				-1.4
1,296,075	-				-1.1
1,296,219	+		LRK53_RS05550	0.12	-0.7
1,296,219	+		LRK53_RS05550	0.12	-0.1
1,296,219	+		LRK53_RS05550	0.12	-0.2
1,296,219	+		LRK53_RS05550	0.12	-0.6
1,296,219	+		LRK53_RS05550	0.12	-0.1
1,296,219	+		LRK53_RS05550	0.12	-0.7
1,296,219	+		LRK53_RS05550	0.12	+1.1
1,296,220	-		LRK53_RS05550	0.12	-0.2
1,296,220	-		LRK53_RS05550	0.12	+0.7
1,296,220	-		LRK53_RS05550	0.12	-1.3
1,296,220	-		LRK53_RS05550	0.12	-1.4
1,296,220	-		LRK53_RS05550	0.12	-0.1
1,296,264	+		LRK53_RS05550	0.17	-2.4
1,296,264	+		LRK53_RS05550	0.17	-1.8
1,296,264	+		LRK53_RS05550	0.17	-0.5
1,296,264	+		LRK53_RS05550	0.17	-1.2
1,296,264	+		LRK53_RS05550	0.17	-1.4
1,296,264	+		LRK53_RS05550	0.17	-0.1
1,296,264	+		LRK53_RS05550	0.17	-1.3
1,296,264	+		LRK53_RS05550	0.17	-0.3
1,296,264	+		LRK53_RS05550	0.17	+0.1
1,296,265	-		LRK53_RS05550	0.17	-1.2
1,296,265	-		LRK53_RS05550	0.17	+0.6
1,296,265	-		LRK53_RS05550	0.17	-0.4
1,296,295	+		LRK53_RS05550	0.20	-1.5
1,296,295	+		LRK53_RS05550	0.20	+0.7
1,296,295	+		LRK53_RS05550	0.20	-2.7
1,296,295	+		LRK53_RS05550	0.20	-1.7
1,296,295	+		LRK53_RS05550	0.20	+0.4
1,296,295	+		LRK53_RS05550	0.20	-0.8
1,296,295	+		LRK53_RS05550	0.20	-1.4
1,296,295	+		LRK53_RS05550	0.20	-0.5
1,296,295	+		LRK53_RS05550	0.20	+0.7
1,296,295	+		LRK53_RS05550	0.20	-1.1
1,296,295	+		LRK53_RS05550	0.20	-2.2
1,296,296	-		LRK53_RS05550	0.20	+0.9
1,296,296	-		LRK53_RS05550	0.20	-1.4
1,296,296	-		LRK53_RS05550	0.20	-1.8
1,296,296	-		LRK53_RS05550	0.20	-1.7
1,296,296	-		LRK53_RS05550	0.20	-1.3
1,296,296	-		LRK53_RS05550	0.20	-1.7
1,296,296	-		LRK53_RS05550	0.20	-1.3
1,296,296	-		LRK53_RS05550	0.20	+0.4
1,296,296	-		LRK53_RS05550	0.20	-0.9
1,296,296	-		LRK53_RS05550	0.20	-0.9
1,296,296	-		LRK53_RS05550	0.20	-1.3
1,296,375	+		LRK53_RS05550	0.28	+0.6
1,296,375	+		LRK53_RS05550	0.28	-0.3
1,296,375	+		LRK53_RS05550	0.28	+0.9
1,296,376	-		LRK53_RS05550	0.28	-2.9
1,296,376	-		LRK53_RS05550	0.28	-3.8
1,296,376	-		LRK53_RS05550	0.28	+0.1
1,296,405	+		LRK53_RS05550	0.31	-0.3
1,296,405	+		LRK53_RS05550	0.31	-1.1
1,296,406	-		LRK53_RS05550	0.32	-0.2
1,296,406	-		LRK53_RS05550	0.32	-0.3
1,296,580	+		LRK53_RS05550	0.50	+0.1
1,296,581	-		LRK53_RS05550	0.50	-1.1
1,296,581	-		LRK53_RS05550	0.50	-0.7
1,296,581	-		LRK53_RS05550	0.50	-0.9
1,296,665	+		LRK53_RS05550	0.59	-2.0
1,296,666	-		LRK53_RS05550	0.59	+0.2
1,296,867	+		LRK53_RS05550	0.80	+0.6
1,296,867	+		LRK53_RS05550	0.80	-0.7
1,296,867	+		LRK53_RS05550	0.80	-1.0
1,296,867	+		LRK53_RS05550	0.80	-0.6
1,296,867	+		LRK53_RS05550	0.80	-2.1
1,296,867	+		LRK53_RS05550	0.80	-0.8
1,296,867	+		LRK53_RS05550	0.80	-1.6
1,296,867	+		LRK53_RS05550	0.80	-0.1
1,296,867	+		LRK53_RS05550	0.80	+0.2
1,296,867	+		LRK53_RS05550	0.80	+1.0
1,296,867	+		LRK53_RS05550	0.80	-0.9
1,296,867	+		LRK53_RS05550	0.80	+0.6
1,296,868	-		LRK53_RS05550	0.80	-1.9
1,296,868	-		LRK53_RS05550	0.80	-2.1
1,296,868	-		LRK53_RS05550	0.80	-0.3
1,296,885	+		LRK53_RS05550	0.82	+0.5
1,296,885	+		LRK53_RS05550	0.82	-1.0
1,296,885	+		LRK53_RS05550	0.82	-0.6
1,296,885	+		LRK53_RS05550	0.82	-0.3
1,296,886	-		LRK53_RS05550	0.82	-1.9
1,296,886	-		LRK53_RS05550	0.82	-1.0
1,296,886	-		LRK53_RS05550	0.82	-0.1
1,296,886	-		LRK53_RS05550	0.82	-1.4
1,296,886	-		LRK53_RS05550	0.82	-0.3
1,296,886	-		LRK53_RS05550	0.82	-1.5
1,296,886	-		LRK53_RS05550	0.82	-1.0
1,296,886	-		LRK53_RS05550	0.82	+0.4
1,296,886	-		LRK53_RS05550	0.82	-2.0
1,296,886	-		LRK53_RS05550	0.82	+0.1
1,296,886	-		LRK53_RS05550	0.82	-1.7
1,297,084	+				-0.9
1,297,084	+				+2.7
1,297,084	+				-0.8
1,297,084	+				-0.8
1,297,085	-				-1.0
1,297,085	-				-1.9
1,297,085	-				-1.4
1,297,141	+		LRK53_RS05555	0.17	-2.3
1,297,268	-		LRK53_RS05555	0.46	+0.7
1,297,268	-		LRK53_RS05555	0.46	+0.1
1,297,357	+		LRK53_RS05555	0.66	-0.5
1,297,605	+				-1.7
1,297,606	-				+1.3
1,297,751	+		LRK53_RS05560	0.19	-0.1
1,297,752	-		LRK53_RS05560	0.19	-1.4
1,297,927	-		LRK53_RS05560	0.33	+1.7
1,297,927	-		LRK53_RS05560	0.33	-2.2