Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS00340

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
77,544	+		LRK53_RS00335	0.40	-0.2
77,544	+		LRK53_RS00335	0.40	+0.8
77,544	+		LRK53_RS00335	0.40	+0.9
77,545	-		LRK53_RS00335	0.40	-0.4
77,545	-		LRK53_RS00335	0.40	-0.9
77,545	-		LRK53_RS00335	0.40	-1.5
77,658	+		LRK53_RS00335	0.48	-0.2
77,659	-		LRK53_RS00335	0.48	-0.9
77,659	-		LRK53_RS00335	0.48	+0.9
77,659	-		LRK53_RS00335	0.48	-1.3
77,659	-		LRK53_RS00335	0.48	-1.4
77,659	-		LRK53_RS00335	0.48	+0.7
77,835	+		LRK53_RS00335	0.61	-0.3
77,836	-		LRK53_RS00335	0.61	-0.8
77,836	-		LRK53_RS00335	0.61	-1.6
78,000	+		LRK53_RS00335	0.72	+1.6
78,001	-		LRK53_RS00335	0.73	-1.4
78,001	-		LRK53_RS00335	0.73	-0.6
78,001	-		LRK53_RS00335	0.73	-0.6
78,001	-		LRK53_RS00335	0.73	-0.9
78,001	-		LRK53_RS00335	0.73	-0.9
78,001	-		LRK53_RS00335	0.73	-0.7
78,001	-		LRK53_RS00335	0.73	+0.6
78,006	+		LRK53_RS00335	0.73	-2.2
78,006	+		LRK53_RS00335	0.73	-1.2
78,051	+		LRK53_RS00335	0.76	-0.6
78,051	+		LRK53_RS00335	0.76	+0.0
78,051	+		LRK53_RS00335	0.76	-0.9
78,051	+		LRK53_RS00335	0.76	-0.8
78,051	+		LRK53_RS00335	0.76	-1.4
78,052	-		LRK53_RS00335	0.76	-1.8
78,052	-		LRK53_RS00335	0.76	+0.1
78,129	+		LRK53_RS00335	0.82	-2.5
78,129	+		LRK53_RS00335	0.82	-2.0
78,130	-		LRK53_RS00335	0.82	+0.8
78,130	-		LRK53_RS00335	0.82	-0.7
78,130	-		LRK53_RS00335	0.82	-0.7
78,130	-		LRK53_RS00335	0.82	-2.4
78,193	+		LRK53_RS00335	0.86	-2.4
78,217	-		LRK53_RS00335	0.88	-0.5
78,273	+				+0.4
78,273	+				-1.2
78,273	+				+1.0
78,274	-				-0.9
78,274	-				-1.3
78,274	-				-1.2
78,656	+		LRK53_RS00340	0.17	-0.3
78,657	-		LRK53_RS00340	0.17	+1.0
78,657	-		LRK53_RS00340	0.17	+0.5
78,657	-		LRK53_RS00340	0.17	-1.0
78,734	+		LRK53_RS00340	0.21	-2.2
78,749	+		LRK53_RS00340	0.22	-1.1
78,750	-		LRK53_RS00340	0.22	-1.5
78,899	+		LRK53_RS00340	0.31	-0.6
78,899	+		LRK53_RS00340	0.31	+0.0
78,900	-		LRK53_RS00340	0.32	-1.1
78,933	+		LRK53_RS00340	0.34	-1.8
78,933	+		LRK53_RS00340	0.34	+0.0
78,934	-		LRK53_RS00340	0.34	-0.4
78,934	-		LRK53_RS00340	0.34	-0.5
78,934	-		LRK53_RS00340	0.34	+0.1
78,934	-		LRK53_RS00340	0.34	-1.2
78,934	-		LRK53_RS00340	0.34	-1.5
78,934	-		LRK53_RS00340	0.34	-1.3
78,935	+		LRK53_RS00340	0.34	+1.7
78,935	+		LRK53_RS00340	0.34	-0.3
78,935	+		LRK53_RS00340	0.34	-0.7
78,935	+		LRK53_RS00340	0.34	-1.2
78,935	+		LRK53_RS00340	0.34	+0.0
78,935	+		LRK53_RS00340	0.34	-0.2
78,935	+		LRK53_RS00340	0.34	+0.3
78,935	+		LRK53_RS00340	0.34	-1.6
78,935	+		LRK53_RS00340	0.34	-0.3
78,935	+		LRK53_RS00340	0.34	-2.9
78,935	+		LRK53_RS00340	0.34	-0.6
78,935	+		LRK53_RS00340	0.34	-0.5
78,935	+		LRK53_RS00340	0.34	-0.4
78,935	+		LRK53_RS00340	0.34	-0.1
78,935	+		LRK53_RS00340	0.34	-2.1
78,935	+		LRK53_RS00340	0.34	-0.2
78,935	+		LRK53_RS00340	0.34	-0.8
78,935	+		LRK53_RS00340	0.34	+1.3
78,935	+		LRK53_RS00340	0.34	-1.7
78,935	+		LRK53_RS00340	0.34	-0.5
78,935	+		LRK53_RS00340	0.34	-0.5
78,935	+		LRK53_RS00340	0.34	-0.3
78,935	+		LRK53_RS00340	0.34	-3.8
78,935	+		LRK53_RS00340	0.34	-0.6
78,935	+		LRK53_RS00340	0.34	-0.4
78,935	+		LRK53_RS00340	0.34	+0.1
78,936	-		LRK53_RS00340	0.34	-1.3
78,936	-		LRK53_RS00340	0.34	-0.2
78,936	-		LRK53_RS00340	0.34	-1.6
78,936	-		LRK53_RS00340	0.34	-1.3
78,936	-		LRK53_RS00340	0.34	-1.7
78,936	-		LRK53_RS00340	0.34	-2.6
78,936	-		LRK53_RS00340	0.34	-0.2
78,936	-		LRK53_RS00340	0.34	-0.9
78,936	-		LRK53_RS00340	0.34	+0.1
78,936	-		LRK53_RS00340	0.34	-0.9
78,936	-		LRK53_RS00340	0.34	-0.2
78,936	-		LRK53_RS00340	0.34	-1.8
78,936	-		LRK53_RS00340	0.34	+0.1
78,936	-		LRK53_RS00340	0.34	-2.0
78,936	-		LRK53_RS00340	0.34	-1.0
78,936	-		LRK53_RS00340	0.34	-1.7
78,936	-		LRK53_RS00340	0.34	-1.4
78,936	-		LRK53_RS00340	0.34	-1.9
78,936	-		LRK53_RS00340	0.34	-1.9
78,936	-		LRK53_RS00340	0.34	+0.0
78,936	-		LRK53_RS00340	0.34	-0.6
78,936	-		LRK53_RS00340	0.34	+1.9
78,936	-		LRK53_RS00340	0.34	+0.1
78,936	-		LRK53_RS00340	0.34	-0.6
79,008	+		LRK53_RS00340	0.38	-0.2
79,008	+		LRK53_RS00340	0.38	-1.8
79,008	+		LRK53_RS00340	0.38	+0.8
79,008	+		LRK53_RS00340	0.38	-1.5
79,009	-		LRK53_RS00340	0.38	-0.6
79,009	-		LRK53_RS00340	0.38	+0.8
79,009	-		LRK53_RS00340	0.38	+0.0
79,064	+		LRK53_RS00340	0.41	-2.2
79,064	+		LRK53_RS00340	0.41	-0.0
79,065	-		LRK53_RS00340	0.42	-1.7
79,065	-		LRK53_RS00340	0.42	-0.9
79,143	-		LRK53_RS00340	0.46	+1.0
79,247	+		LRK53_RS00340	0.53	-0.3
79,250	+		LRK53_RS00340	0.53	-1.1
79,251	-		LRK53_RS00340	0.53	-0.8
79,251	-		LRK53_RS00340	0.53	-0.2
79,251	-		LRK53_RS00340	0.53	+0.4
79,364	+		LRK53_RS00340	0.60	-1.2
79,364	+		LRK53_RS00340	0.60	-0.2
79,364	+		LRK53_RS00340	0.60	-0.8
79,364	+		LRK53_RS00340	0.60	-0.5
79,364	+		LRK53_RS00340	0.60	+1.6
79,364	+		LRK53_RS00340	0.60	-2.0
79,364	+		LRK53_RS00340	0.60	+0.5
79,365	-		LRK53_RS00340	0.60	-1.1
79,365	-		LRK53_RS00340	0.60	+2.3
79,365	-		LRK53_RS00340	0.60	-2.3
79,365	-		LRK53_RS00340	0.60	-0.2
79,365	-		LRK53_RS00340	0.60	-1.0
79,365	-		LRK53_RS00340	0.60	-3.0
79,365	-		LRK53_RS00340	0.60	-1.3
79,365	-		LRK53_RS00340	0.60	-1.0
79,365	-		LRK53_RS00340	0.60	-1.0
79,365	-		LRK53_RS00340	0.60	-0.4
79,365	-		LRK53_RS00340	0.60	-1.2
79,365	-		LRK53_RS00340	0.60	-1.0
79,472	+		LRK53_RS00340	0.66	-1.7
79,473	-		LRK53_RS00340	0.66	+1.2
79,473	-		LRK53_RS00340	0.66	-1.7
79,628	+		LRK53_RS00340	0.76	-1.6
79,628	+		LRK53_RS00340	0.76	-1.3
79,658	+		LRK53_RS00340	0.78	-0.9
79,658	+		LRK53_RS00340	0.78	+2.0
79,745	+		LRK53_RS00340	0.83	+2.7
79,745	+		LRK53_RS00340	0.83	-0.3
79,745	+		LRK53_RS00340	0.83	-1.9
79,745	+		LRK53_RS00340	0.83	-0.7
79,745	+		LRK53_RS00340	0.83	-0.3
79,745	+		LRK53_RS00340	0.83	+0.8
79,745	+		LRK53_RS00340	0.83	-0.6
79,745	+		LRK53_RS00340	0.83	-2.2
79,746	-		LRK53_RS00340	0.83	-0.5
79,746	-		LRK53_RS00340	0.83	-0.8
79,746	-		LRK53_RS00340	0.83	-1.0
79,746	-		LRK53_RS00340	0.83	-0.6
79,746	-		LRK53_RS00340	0.83	-0.6
79,746	-		LRK53_RS00340	0.83	-1.0
79,746	-		LRK53_RS00340	0.83	-0.7
79,746	-		LRK53_RS00340	0.83	-0.6
79,746	-		LRK53_RS00340	0.83	-1.4
79,757	+		LRK53_RS00340	0.84	+0.6
79,784	+		LRK53_RS00340	0.85	-0.9
79,784	+		LRK53_RS00340	0.85	+0.1
79,785	-		LRK53_RS00340	0.85	-0.7
79,805	+		LRK53_RS00340	0.87	+0.5
79,805	+		LRK53_RS00340	0.87	+0.6
79,805	+		LRK53_RS00340	0.87	-0.3
79,805	+		LRK53_RS00340	0.87	-0.3
79,805	+		LRK53_RS00340	0.87	+0.9
79,806	-		LRK53_RS00340	0.87	-1.1
79,806	-		LRK53_RS00340	0.87	-1.4
79,806	-		LRK53_RS00340	0.87	-0.1
79,806	-		LRK53_RS00340	0.87	-0.3
80,069	-				-0.8
80,069	-				-0.6
80,078	-				-0.5
80,083	+				-1.3
80,083	+				-0.2
80,083	+				+0.0
80,083	+				+0.7
80,083	+				-0.9
80,083	+				-0.6
80,083	+				+0.0
80,083	+				+1.6
80,083	+				-0.1
80,084	-				-0.1
80,084	-				-0.9
80,084	-				-1.8
80,084	-				-1.4
80,084	-				+1.7
80,084	-				-2.7
80,084	-				+1.2
80,084	-				-1.6
80,084	-				+0.5
80,084	-				+1.3
80,084	-				-1.6
80,344	+		LRK53_RS00345	0.58	+0.8
80,344	+		LRK53_RS00345	0.58	-0.6
80,344	+		LRK53_RS00345	0.58	-1.2
80,344	+		LRK53_RS00345	0.58	-0.2
80,345	-		LRK53_RS00345	0.58	-1.2
80,345	-		LRK53_RS00345	0.58	-0.2
80,345	-		LRK53_RS00345	0.58	-0.6
80,345	-		LRK53_RS00345	0.58	-0.3
80,473	+		LRK53_RS00345	0.82	+0.6
80,473	+		LRK53_RS00345	0.82	-1.2
80,473	+		LRK53_RS00345	0.82	+0.1
80,474	-		LRK53_RS00345	0.82	+0.5
80,621	+				-0.9
80,621	+				-1.2
80,621	+				-2.2
80,622	-				+1.8
80,676	+				-0.7
80,676	+				-1.9
80,676	+				-0.6
80,677	-				-1.2
80,701	+				-0.7
80,701	+				-2.3
80,701	+				+0.3
80,701	+				-0.6
80,702	-				-0.0
80,763	+				+0.8
80,763	+				-1.0
80,763	+				+0.7
80,764	-				-2.7
80,764	-				+0.7
80,764	-				+4.4