Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS00015

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
2,814	+				+0.1
2,814	+				-1.4
2,814	+				-0.5
2,814	+				-2.2
2,814	+				-0.6
2,814	+				-1.9
2,815	-				+0.3
2,815	-				+0.3
3,173	-		LRK53_RS00015	0.37	+0.3
3,354	+		LRK53_RS00015	0.54	+0.5
3,354	+		LRK53_RS00015	0.54	-0.2
3,354	+		LRK53_RS00015	0.54	-1.5
3,354	+		LRK53_RS00015	0.54	-0.4
3,354	+		LRK53_RS00015	0.54	-1.0
3,354	+		LRK53_RS00015	0.54	-0.5
3,354	+		LRK53_RS00015	0.54	-0.2
3,354	+		LRK53_RS00015	0.54	-1.5
3,354	+		LRK53_RS00015	0.54	+0.1
3,354	+		LRK53_RS00015	0.54	-1.1
3,355	-		LRK53_RS00015	0.54	+0.1
3,355	-		LRK53_RS00015	0.54	-1.5
3,355	-		LRK53_RS00015	0.54	-2.1
3,355	-		LRK53_RS00015	0.54	-1.5
3,355	-		LRK53_RS00015	0.54	-1.1
3,355	-		LRK53_RS00015	0.54	+0.1
3,358	+		LRK53_RS00015	0.54	-0.7
3,358	+		LRK53_RS00015	0.54	-1.1
3,358	+		LRK53_RS00015	0.54	+0.0
3,358	+		LRK53_RS00015	0.54	-0.6
3,358	+		LRK53_RS00015	0.54	-0.9
3,358	+		LRK53_RS00015	0.54	-1.3
3,359	-		LRK53_RS00015	0.54	-0.3
3,359	-		LRK53_RS00015	0.54	+0.3
3,359	-		LRK53_RS00015	0.54	-0.9
3,359	-		LRK53_RS00015	0.54	-0.6
3,359	-		LRK53_RS00015	0.54	-1.8
3,516	+		LRK53_RS00015	0.69	-0.5
3,516	+		LRK53_RS00015	0.69	+0.4
3,516	+		LRK53_RS00015	0.69	-1.1
3,516	+		LRK53_RS00015	0.69	-1.0
3,516	+		LRK53_RS00015	0.69	-0.7
3,516	+		LRK53_RS00015	0.69	-0.6
3,517	-		LRK53_RS00015	0.69	-1.3
3,517	-		LRK53_RS00015	0.69	-0.9
3,517	-		LRK53_RS00015	0.69	-0.9
3,517	-		LRK53_RS00015	0.69	+0.4
3,517	-		LRK53_RS00015	0.69	-1.8
3,517	-		LRK53_RS00015	0.69	-0.9
3,517	-		LRK53_RS00015	0.69	-1.9
3,517	-		LRK53_RS00015	0.69	+1.1
3,517	-		LRK53_RS00015	0.69	-0.2
3,517	-		LRK53_RS00015	0.69	-1.7
3,606	+		LRK53_RS00015	0.77	+0.0
3,607	-		LRK53_RS00015	0.77	-0.6
3,644	-		LRK53_RS00015	0.81	-1.4
3,644	-		LRK53_RS00015	0.81	-1.3
3,644	-		LRK53_RS00015	0.81	-0.3
3,848	+				-1.5
3,848	+				-0.6
3,848	+				+0.3
3,848	+				+0.3
3,849	-				+0.5
3,850	+				-0.3
3,850	+				+0.4
3,850	+				-0.6
3,850	+				-0.7
3,854	+				-0.2
3,854	+				-0.7
3,854	+				-0.5
3,854	+				-0.3
3,854	+				+2.3
3,854	+				-0.2
3,854	+				+0.3
3,854	+				+0.8
3,854	+				+1.4
3,854	+				+0.0
3,854	+				-2.2
3,854	+				-0.3